STXBP5

General Information

Gene Name : STXBP5
Gene ID : ENSG00000164506.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: STXBP5)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	STXBP5	ENSG00000164506.14	6.71	7.10	6.90	ENCSR000AEF
HepG2	STXBP5	ENSG00000164506.14	5.94	9.20	7.57	ENCSR985KAT
K562	STXBP5	ENSG00000164506.14	59.34	48.10	53.72	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for STXBP5 is not avaliable on ENCORE database.

Proteins bound to RNA

STXBP5 RNA is bound by 44 proteins.

CanvasJS.com

eCLIP assay for STXBP5 is not avaliable on ENCORE database.

44 proteins are bound to STXBP5 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	147554951	147555090	+	intron-Distal	9.14132	95.63937	K562	QKI
chr6	147664539	147664664	+	intron-Distal	4.80708	39.12454	K562	QKI
chr6	147526670	147526779	+	intron-Distal	3.48051	36.52802	K562	KHSRP
chr6	147525624	147525672	+	5'-UTR,CDS	3.95856	30.42035	K562	RBM15
chr6	147526600	147526636	+	intron-Distal	3.91460	28.27437	K562	KHSRP
chr6	147526636	147526670	+	intron-Distal	3.91186	26.12998	K562	KHSRP
chr6	147691356	147691442	+	intron-Distal	4.54227	25.59552	K562	SAFB2
chr6	147658373	147658439	+	intron-Distal	4.22674	25.04675	K562	HNRNPL
chr6	147655633	147655710	+	intron-Distal	4.84929	22.81933	K562	KHSRP
chr6	147645770	147645901	+	intron-Distal	3.61997	22.77536	K562	PTBP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 365 entries

eCLIP assay for STXBP5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for STXBP5 is not available on ENCORE database.
126 RBPs can affect the levels of STXBP5.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for STXBP5 is not available on ENCORE database.

126 RBPs can affect the gene expression of STXBP5 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
STXBP5	ENSG00000164506.10	1346.80120	2955.04230	-1.13360	72.95070	70.04780	K562	NSUN2
STXBP5	ENSG00000164506.10	1034.74170	3899.02300	-1.91380	69.08160	66.51540	K562	AQR
STXBP5	ENSG00000164506.10	1457.10280	3807.16780	-1.38560	62.22640	59.33540	K562	RBM15
STXBP5	ENSG00000164506.10	1299.90440	2659.63800	-1.03280	42.92840	40.46250	K562	MTPAP
STXBP5	ENSG00000164506.10	1901.09100	3786.46730	-0.99400	40.69180	38.56120	K562	AGGF1
STXBP5	ENSG00000164506.10	1287.03630	2638.44670	-1.03560	33.14540	30.43190	K562	HNRNPU
STXBP5	ENSG00000164506.10	5724.33670	3168.76320	0.85310	32.07920	30.13750	K562	EIF2S2
STXBP5	ENSG00000164506.10	1933.30910	4222.65120	-1.12710	32.67910	29.98950	K562	GRSF1
STXBP5	ENSG00000164506.10	1201.88900	2681.05740	-1.15750	32.05830	29.34270	K562	WDR3
STXBP5	ENSG00000164506.10	1681.45870	3907.79790	-1.21660	29.59580	27.79850	K562	PUS1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 138 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for STXBP5 is not available on ENCORE database.

16 RBPs can affect the splicing of STXBP5 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	STXBP5	ENSG00000164506.10	chr6	+	147635399	147635467			147635019	147635167	147635731	147635772	-0.20400	0.00000	0.00002	excluded	K562	SF3B4
SE	STXBP5	ENSG00000164506.10	chr6	+	147660472	147660520			147655292	147655358	147674458	147674509	0.22900	0.00000	0.00001	included	K562	PUM1
SE	STXBP5	ENSG00000164506.10	chr6	+	147649834	147649918			147648336	147648412	147655292	147655358	0.05600	0.00000	0.00003	included	K562	PTBP1
A3SS	STXBP5	ENSG00000164506.10	chr6	+	147646070	147646220			147646094	147646220	147637364	147637543	0.09000	0.00000	0.00001	longer	K562	AQR
MXE	STXBP5	ENSG00000164506.10	chr6	+	147655292	147655358	147674458	147674509	147648260	147648412	147680219	147680459	-0.19800	0.00000	0.00020	2included	K562	XRCC6
MXE	STXBP5	ENSG00000164506.10	chr6	+	147655292	147655358	147674458	147674509	147648260	147648412	147680219	147680459	-0.18300	0.00000	0.00189	2included	K562	EIF4G2
SE	STXBP5	ENSG00000164506.10	chr6	+	147612229	147612308			147599216	147599340	147631219	147631374	-0.13300	0.00001	0.00051	excluded	K562	U2AF1
MXE	STXBP5	ENSG00000164506.10	chr6	+	147660314	147660374	147660472	147660520	147655292	147655358	147674458	147674509	-0.18000	0.00001	0.00208	2included	K562	PUM1
SE	STXBP5	ENSG00000164506.10	chr6	+	147629637	147629728			147612229	147612308	147631219	147631374	0.10700	0.00002	0.00291	included	K562	HNRNPL
SE	STXBP5	ENSG00000164506.10	chr6	+	147612229	147612308			147599216	147599340	147631219	147631374	-0.16300	0.00002	0.00053	excluded	K562	HNRNPC

Showing 1 to 10 of 28 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

STXBP5

General Information

Functions

Localization

Domains (AlphaFold: STXBP5)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for STXBP5 is not avaliable on ENCORE database.

44 proteins are bound to STXBP5 RNA:

eCLIP assay for STXBP5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for STXBP5 is not available on ENCORE database.

126 RBPs can affect the gene expression of STXBP5 :

The Knockdown/knockout RNA-Seq assay for STXBP5 is not available on ENCORE database.

16 RBPs can affect the splicing of STXBP5 :

The Knockdown/knockout RNA-Seq assay for STXBP5 is not avaliable on ENCORE database.