SRCIN1

General Information

Gene Name : SRCIN1
Gene ID : ENSG00000277363.4
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SRCIN1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SRCIN1	ENSG00000277363.4	0.06	0.17	0.12	ENCSR000AEF
HepG2	SRCIN1	ENSG00000277363.4	2.85	0.56	1.71	ENCSR985KAT
K562	SRCIN1	ENSG00000277363.4	0.11	0.06	0.08	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SRCIN1 is not avaliable on ENCORE database.

Proteins bound to RNA

SRCIN1 RNA is bound by 22 proteins.

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eCLIP assay for SRCIN1 is not avaliable on ENCORE database.

22 proteins are bound to SRCIN1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	36700877	36700922	-	intron-Distal	8.30232	58.75954	HepG2	XPO5
chr17	36761019	36761104	-	intron-Distal	6.02306	37.28055	HepG2	CSTF2T
chr17	36760699	36760776	-	CDS,intron-Distal	5.00762	37.25253	HepG2	CSTF2T
chr17	36761348	36761439	-	intron-Distal	5.38434	35.83909	HepG2	CSTF2T
chr17	36760944	36760992	-	intron-Distal,intron-Proximal	5.06112	32.95380	HepG2	CSTF2T
chr17	36761465	36761550	-	intron-Distal	5.45811	24.97508	HepG2	CSTF2T
chr17	36759955	36760012	-	intron-Distal	4.57617	21.89527	HepG2	CSTF2T
chr17	36760913	36760944	-	intron-Distal,intron-Proximal	4.58882	21.57018	HepG2	CSTF2T
chr17	36761279	36761339	-	intron-Distal	6.21615	21.26594	HepG2	CSTF2T
chr17	36715452	36715662	-	intron-Distal	6.47591	19.32881	HepG2	DDX59
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 129 entries

eCLIP assay for SRCIN1 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for SRCIN1 is not available on ENCORE database.
108 RBPs can affect the levels of SRCIN1.

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The Knockdown/knockout RNA-Seq assay for SRCIN1 is not available on ENCORE database.

108 RBPs can affect the gene expression of SRCIN1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SRCIN1	ENSG00000017373.11	28.62060	324.82100	-3.50450	51.39300	49.92020	HepG2	SRSF1
SRCIN1	ENSG00000017373.11	733.42900	176.46280	2.05520	46.03620	43.93380	HepG2	SRSF7
SRCIN1	ENSG00000017373.11	476.96470	111.04380	2.10270	42.14700	40.00780	HepG2	HNRNPU
SRCIN1	ENSG00000017373.11	500.88050	107.92850	2.21430	41.48710	39.97320	HepG2	TIAL1
SRCIN1	ENSG00000017373.11	67.34610	499.15870	-2.88980	42.26280	39.59880	HepG2	SF3A3
SRCIN1	ENSG00000017373.11	56.67180	357.53850	-2.65740	39.37590	37.86670	HepG2	RBM22
SRCIN1	ENSG00000017373.11	621.72730	179.60000	1.79140	39.82830	37.67580	HepG2	HNRNPF
SRCIN1	ENSG00000017373.11	1073.65310	427.77650	1.32750	35.18020	33.47490	HepG2	ETF1
SRCIN1	ENSG00000017373.11	400.27470	99.54860	2.00740	32.48980	30.37500	HepG2	DNAJC21
SRCIN1	ENSG00000017373.11	1294.70440	252.06890	2.36060	30.81230	28.98020	HepG2	EIF2S1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 110 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SRCIN1

General Information

Functions

Localization

Domains (AlphaFold: SRCIN1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SRCIN1 is not avaliable on ENCORE database.

22 proteins are bound to SRCIN1 RNA:

eCLIP assay for SRCIN1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SRCIN1 is not available on ENCORE database.

108 RBPs can affect the gene expression of SRCIN1 :

The Knockdown/knockout RNA-Seq assay for SRCIN1 is not available on ENCORE database.

No RBPs affect the alternative splcing events of SRCIN1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for SRCIN1 is not avaliable on ENCORE database.