HNRNPDL

General Information

Gene Name : HNRNPDL
Gene ID : ENSG00000152795.17
Essential Gene : No

Functions

Translation regulation

Localization

Not Available

Domains (AlphaFold: HNRNPDL)

RRM

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	HNRNPDL	ENSG00000152795.17	330.00	297.18	313.59	ENCSR000AEF
HepG2	HNRNPDL	ENSG00000152795.17	305.83	455.75	380.79	ENCSR985KAT
K562	HNRNPDL	ENSG00000152795.17	283.80	263.90	273.85	ENCSR000AEO

Assays

1 Released experiments are available on ENCORE database.

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Linked Antibody	Controls	Method	Note
RNA Bind-n-Seq	RBNS: HNRNPDL	ENCSR055HDN	HNRNPDL	cell-free sample	Released		ENCSR599EMY

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project	Note
HNRNPDL	HepG2	shRNA			BGHLV22-27,BGHLV22-28	BGHLV22-1,BGHLV22-2	redo transfection,redo transfection	NotSatisfied	ENCODE3

RNA Bind-n-Seqn

GeneName	gene_aliases	Status	Project	Note
HNRNPDL	HNRNPDL		Released	ENCODE3

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for HNRNPDL is not avaliable on ENCORE database.

The binding motifs of HNRNPDL

Proteins bound to RNA

HNRNPDL RNA is bound by 51 proteins.

CanvasJS.com

eCLIP assay for HNRNPDL is not avaliable on ENCORE database.

51 proteins are bound to HNRNPDL RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr4	83345874	83345955	-	3'-UTR,intron-Distal	4.90356	400.00000	K562	PUM2
chr4	83346743	83346816	-	3'-UTR,intron-Distal	4.21898	400.00000	HepG2	U2AF2
chr4	83347618	83347672	-	CDS,intron-Distal	3.71684	63.76586	HepG2	BCLAF1
chr4	83348610	83348627	-	CDS,intron-Distal	4.64491	62.76746	HepG2	BCLAF1
chr4	83346816	83346838	-	3'-UTR,intron-Distal,intron-Proximal	3.50034	61.85431	HepG2	U2AF2
chr4	83347672	83347752	-	CDS,intron-Distal	4.51870	57.55686	HepG2	BCLAF1
chr4	83347194	83347249	-	3'-UTR,CDS,intron-Distal	4.38514	56.84728	HepG2	BCLAF1
chr4	83348660	83348710	-	CDS,intron-Distal	4.96521	52.41420	HepG2	BCLAF1
chr4	83348585	83348600	-	CDS,intron-Distal,intron-Proximal	4.80479	51.58801	HepG2	BCLAF1
chr4	83348342	83348390	-	CDS,intron-Distal,intron-Proximal	5.40012	50.23213	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 241 entries

eCLIP assay for HNRNPDL is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for HNRNPDL is not available on ENCORE database.
125 RBPs can affect the levels of HNRNPDL.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for HNRNPDL is not available on ENCORE database.

125 RBPs can affect the gene expression of HNRNPDL :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
HNRNPDL	ENSG00000152795.13	3367.52810	9835.58480	-1.54630	66.86780	64.44920	HepG2	PUF60
HNRNPDL	ENSG00000152795.13	5533.03200	8788.22200	-0.66750	40.27630	38.82460	HepG2	ZNF622
HNRNPDL	ENSG00000152795.13	1946.39260	4017.23990	-1.04540	32.58680	30.16550	K562	POLR2G
HNRNPDL	ENSG00000152795.13	3703.95250	6341.55900	-0.77580	31.87490	30.02720	HepG2	SRSF7
HNRNPDL	ENSG00000152795.13	6472.14600	9125.72010	-0.49570	28.87480	26.87160	K562	NSUN2
HNRNPDL	ENSG00000152795.13	3852.89060	6732.08270	-0.80510	26.39210	23.88380	K562	HNRNPU
HNRNPDL	ENSG00000152795.13	4820.67470	7096.41250	-0.55790	24.54430	23.01070	HepG2	CKAP4
HNRNPDL	ENSG00000152795.13	16671.04340	7821.82340	1.09170	23.69990	22.12420	K562	PUS1
HNRNPDL	ENSG00000152795.13	5176.36650	7714.69600	-0.57570	22.59410	21.12880	HepG2	UTP3
HNRNPDL	ENSG00000152795.13	3639.45860	6953.09400	-0.93390	22.27850	20.72220	HepG2	RPLP0
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 150 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for HNRNPDL is not available on ENCORE database.

69 RBPs can affect the splicing of HNRNPDL :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	HNRNPDL	ENSG00000152795.13	chr4	-	83347615	83347786	83346735	83347282	83348342	83348457	-0.63100	0.00000	excluded	K562	SRSF1
SE	HNRNPDL	ENSG00000152795.13	chr4	-	83346715	83346820	83345781	83346036	83347189	83347282	0.14100	0.00000	included	K562	FTO
SE	HNRNPDL	ENSG00000152795.13	chr4	-	83346715	83346947	83345781	83346036	83347189	83347282	0.05200	0.00086	included	K562	SMNDC1
SE	HNRNPDL	ENSG00000152795.13	chr4	-	83346715	83346820	83345781	83346036	83347189	83347282	0.20700	0.00000	included	K562	WDR3
SE	HNRNPDL	ENSG00000152795.13	chr4	-	83346715	83346820	83345781	83346036	83347189	83347282	0.17800	0.00000	included	HepG2	U2AF1
SE	HNRNPDL	ENSG00000152795.13	chr4	-	83347615	83347786	83346735	83347282	83348342	83348498	-0.05300	0.00000	excluded	K562	AKAP8L
SE	HNRNPDL	ENSG00000152795.13	chr4	-	83346715	83346820	83345781	83346036	83347189	83347274	-0.08900	0.00024	excluded	K562	XRCC6
SE	HNRNPDL	ENSG00000152795.13	chr4	-	83346715	83346820	83345781	83346036	83347189	83347274	0.10600	0.00026	included	K562	FMR1
SE	HNRNPDL	ENSG00000152795.13	chr4	-	83346715	83346820	83345781	83346036	83347189	83347282	0.22900	0.00000	included	HepG2	HNRNPK
SE	HNRNPDL	ENSG00000152795.13	chr4	-	83346715	83346820	83345781	83346036	83347189	83347282	0.16500	0.00000	included	HepG2	DDX59

Showing 1 to 10 of 142 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

HNRNPDL

General Information

Functions

Localization

Domains (AlphaFold: HNRNPDL)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for HNRNPDL is not avaliable on ENCORE database.

51 proteins are bound to HNRNPDL RNA:

eCLIP assay for HNRNPDL is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for HNRNPDL is not available on ENCORE database.

125 RBPs can affect the gene expression of HNRNPDL :

The Knockdown/knockout RNA-Seq assay for HNRNPDL is not available on ENCORE database.

69 RBPs can affect the splicing of HNRNPDL :

The Knockdown/knockout RNA-Seq assay for HNRNPDL is not avaliable on ENCORE database.