ARL4A

General Information

Gene Name : ARL4A
Gene ID : ENSG00000122644.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ARL4A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ARL4A	ENSG00000122644.12	3.31	2.55	2.93	ENCSR000AEF
HepG2	ARL4A	ENSG00000122644.12	15.25	25.47	20.36	ENCSR985KAT
K562	ARL4A	ENSG00000122644.12	128.67	115.79	122.23	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ARL4A is not avaliable on ENCORE database.

Proteins bound to RNA

ARL4A RNA is bound by 11 proteins.

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eCLIP assay for ARL4A is not avaliable on ENCORE database.

11 proteins are bound to ARL4A RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	12727352	12727390	+	5'-UTR,intron-Distal,intron-Proximal	4.26411	31.57792	K562	AQR
chr7	12727390	12727400	+	intron-Distal,intron-Proximal	4.36166	30.82734	K562	AQR
chr7	12727860	12727939	+	3'-UTR,5'-UTR,CDS	4.52154	30.59205	K562	RBM15
chr7	12726547	12726669	+	5'-UTR,intron-Proximal	5.41731	24.70350	K562	DDX3X
chr7	12727320	12727355	+	5'-UTR,intron-Distal,intron-Proximal	4.19670	19.55003	K562	DDX3X
chr7	12727400	12727449	+	intron-Distal,intron-Proximal	3.95649	18.13896	K562	AQR
chr7	12728798	12728871	+	3'-UTR,polyA_site	4.96324	16.24306	K562	FMR1
chr7	12729935	12730001	+	3'-UTR	3.20582	14.08659	K562	UPF1
chr7	12727273	12727320	+	5'-UTR,intron-Distal	3.27056	12.24852	K562	DDX3X
chr7	12727925	12727952	+	CDS	3.33424	11.32854	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 20 entries

eCLIP assay for ARL4A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ARL4A is not available on ENCORE database.
150 RBPs can affect the levels of ARL4A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ARL4A is not available on ENCORE database.

150 RBPs can affect the gene expression of ARL4A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ARL4A	ENSG00000122644.8	1504.18100	4957.23060	-1.72060	60.94970	58.55170	K562	AQR
ARL4A	ENSG00000122644.8	1302.33970	541.62840	1.26560	42.03180	40.68310	HepG2	SRFBP1
ARL4A	ENSG00000122644.8	741.33990	212.93540	1.79960	40.93470	39.40500	HepG2	NELFE
ARL4A	ENSG00000122644.8	627.07470	198.31900	1.66070	33.47380	31.77990	HepG2	RECQL
ARL4A	ENSG00000122644.8	630.79050	207.92450	1.60100	31.07420	29.86540	HepG2	SRSF1
ARL4A	ENSG00000122644.8	593.65640	214.98090	1.46530	30.95830	29.27810	HepG2	CKAP4
ARL4A	ENSG00000122644.8	710.31290	190.47550	1.89870	31.83710	29.11950	HepG2	G3BP2
ARL4A	ENSG00000122644.8	825.37290	186.64530	2.14460	30.66240	28.57460	HepG2	EIF4B
ARL4A	ENSG00000122644.8	5269.32200	2357.63260	1.16020	29.30180	27.51420	K562	PUS1
ARL4A	ENSG00000122644.8	690.08620	220.22100	1.64770	25.48710	22.02860	HepG2	EXOSC9
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 182 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ARL4A is not available on ENCORE database.

9 RBPs can affect the splicing of ARL4A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ARL4A	ENSG00000122644.8	chr7	+	12727259	12727353	12726480	12726668	12727790	12728804	-0.09600	0.00003	0.00263	excluded	K562	PTBP1
SE	ARL4A	ENSG00000122644.8	chr7	+	12727259	12727353	12726480	12726668	12727790	12728804	-0.09300	0.00008	0.01803	excluded	K562	MATR3
SE	ARL4A	ENSG00000122644.8	chr7	+	12727259	12727353	12726480	12726668	12727790	12728804	-0.49100	0.00014	0.05441	excluded	HepG2	XPO5
SE	ARL4A	ENSG00000122644.8	chr7	+	12727259	12727353	12726480	12726668	12727793	12728539	-0.21900	0.00015	0.01888	excluded	K562	XRCC6
SE	ARL4A	ENSG00000122644.8	chr7	+	12727259	12727353	12726480	12726668	12727790	12728804	-0.08600	0.00051	0.07676	excluded	K562	EIF4G2
SE	ARL4A	ENSG00000122644.8	chr7	+	12727259	12727353	12726480	12726668	12727790	12728804	-0.08600	0.00073	0.08951	excluded	K562	ZC3H8
SE	ARL4A	ENSG00000122644.8	chr7	+	12727259	12727353	12726480	12726668	12727790	12728804	0.05700	0.00377	0.07530	included	K562	AGGF1
SE	ARL4A	ENSG00000122644.8	chr7	+	12727259	12727353	12726480	12726668	12727790	12728804	-0.06700	0.00453	0.07008	excluded	K562	SRSF1
SE	ARL4A	ENSG00000122644.8	chr7	+	12727259	12727353	12726480	12726668	12727790	12728804	-0.07600	0.01239	0.09623	excluded	K562	AQR

Showing 1 to 9 of 9 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ARL4A

General Information

Functions

Localization

Domains (AlphaFold: ARL4A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ARL4A is not avaliable on ENCORE database.

11 proteins are bound to ARL4A RNA:

eCLIP assay for ARL4A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ARL4A is not available on ENCORE database.

150 RBPs can affect the gene expression of ARL4A :

The Knockdown/knockout RNA-Seq assay for ARL4A is not available on ENCORE database.

9 RBPs can affect the splicing of ARL4A :

The Knockdown/knockout RNA-Seq assay for ARL4A is not avaliable on ENCORE database.