AGT

General Information

Gene Name : AGT
Gene ID : ENSG00000135744.7
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: AGT)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	AGT	ENSG00000135744.7	0.00	0.00	0.00	ENCSR000AEF
HepG2	AGT	ENSG00000135744.7	807.63	438.06	622.85	ENCSR985KAT
K562	AGT	ENSG00000135744.7	0.00	0.00	0.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for AGT is not avaliable on ENCORE database.

Proteins bound to RNA

AGT RNA is bound by 32 proteins.

CanvasJS.com

eCLIP assay for AGT is not avaliable on ENCORE database.

32 proteins are bound to AGT RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	230838614	230838641	-	3'-UTR,intron-Distal	3.34827	400.00000	HepG2	LARP4
chr1	230838576	230838614	-	3'-UTR,intron-Distal	3.44153	400.00000	HepG2	LARP4
chr1	230838575	230838657	-	3'-UTR,intron-Distal	6.01336	400.00000	HepG2	UPF1
chr1	230846577	230846599	-	5'-UTR,CDS,intron-Distal	3.58655	400.00000	HepG2	DDX3X
chr1	230839938	230839940	-	CDS,intron-Distal,intron-Proximal	5.18723	400.00000	HepG2	SND1
chr1	230846093	230846105	-	CDS,intron-Distal	5.07019	400.00000	HepG2	SND1
chr1	230846517	230846523	-	CDS,intron-Distal	5.63676	400.00000	HepG2	RPS3
chr1	230846535	230846577	-	CDS,intron-Distal	3.76136	400.00000	HepG2	DDX3X
chr1	230846533	230846576	-	CDS,intron-Distal	5.19817	400.00000	HepG2	RPS3
chr1	230846140	230846145	-	CDS,intron-Distal	4.98729	400.00000	HepG2	SND1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 174 entries

eCLIP assay for AGT is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for AGT is not available on ENCORE database.
117 RBPs can affect the levels of AGT.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for AGT is not available on ENCORE database.

117 RBPs can affect the gene expression of AGT :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
AGT	ENSG00000135744.7	24951.99820	72943.95500	-1.54760	200.28060	197.95470	HepG2	SRSF1
AGT	ENSG00000135744.7	59029.58920	28176.75540	1.06680	120.02760	117.11090	HepG2	SLBP
AGT	ENSG00000135744.7	55029.63010	19376.34580	1.50580	100.92040	98.23130	HepG2	SRSF7
AGT	ENSG00000135744.7	12567.06290	41188.52800	-1.71260	99.65190	97.44430	HepG2	RBM22
AGT	ENSG00000135744.7	0.00000	269.92500	-99999.99999	87.36580	84.31580	K562	WDR43
AGT	ENSG00000135744.7	59705.88110	19419.66410	1.62030	79.52880	76.67630	HepG2	IGF2BP1
AGT	ENSG00000135744.7	60709.46950	19721.34010	1.62210	77.49050	74.84530	HepG2	HNRNPF
AGT	ENSG00000135744.7	8.46940	303.35010	-5.16260	75.63480	72.87060	K562	UPF1
AGT	ENSG00000135744.7	0.00000	259.56620	-99999.99999	76.09330	72.81030	K562	WDR3
AGT	ENSG00000135744.7	6.44400	289.23410	-5.48810	73.52910	70.35800	K562	SRPK2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 124 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for AGT is not available on ENCORE database.

11 RBPs can affect the splicing of AGT :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
MXE	AGT	ENSG00000135744.7	chr1	-	230841678	230841842	230845740	230846599	230839938	230840083	230849831	230850043	0.18300	0.00000	0.00000	1included	HepG2	NOLC1
MXE	AGT	ENSG00000135744.7	chr1	-	230841678	230841946	230845740	230846599	230839938	230840083	230849831	230850043	0.20400	0.00000	0.00000	1included	HepG2	DDX55
MXE	AGT	ENSG00000135744.7	chr1	-	230841678	230841946	230845740	230846599	230839938	230840083	230849831	230850043	0.17900	0.00000	0.00000	1included	HepG2	SUPV3L1
MXE	AGT	ENSG00000135744.7	chr1	-	230841678	230841946	230845740	230846599	230839938	230840083	230849831	230850043	0.15300	0.00000	0.00000	1included	HepG2	HNRNPL
MXE	AGT	ENSG00000135744.7	chr1	-	230841678	230841946	230845740	230846599	230839938	230840083	230849831	230850043	0.18900	0.00000	0.00000	1included	HepG2	TIAL1
MXE	AGT	ENSG00000135744.7	chr1	-	230841678	230841946	230845740	230846599	230839938	230840083	230849831	230850043	0.12900	0.00004	0.00238	1included	HepG2	HNRNPU
MXE	AGT	ENSG00000135744.7	chr1	-	230841678	230841946	230845740	230846599	230839938	230840083	230849831	230850043	0.10500	0.00015	0.01971	1included	HepG2	UCHL5
MXE	AGT	ENSG00000135744.7	chr1	-	230841678	230841946	230845740	230846599	230839938	230840083	230849831	230850043	0.09200	0.00021	0.01409	1included	HepG2	XPO5
MXE	AGT	ENSG00000135744.7	chr1	-	230841678	230841946	230845740	230846599	230839938	230840083	230849831	230850043	0.09100	0.00047	0.01966	1included	HepG2	XRN2
MXE	AGT	ENSG00000135744.7	chr1	-	230841678	230841946	230845740	230846599	230839938	230840083	230849831	230850043	0.13000	0.00193	0.05561	1included	HepG2	HNRNPC

Showing 1 to 10 of 11 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

AGT

General Information

Functions

Localization

Domains (AlphaFold: AGT)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for AGT is not avaliable on ENCORE database.

32 proteins are bound to AGT RNA:

eCLIP assay for AGT is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for AGT is not available on ENCORE database.

117 RBPs can affect the gene expression of AGT :

The Knockdown/knockout RNA-Seq assay for AGT is not available on ENCORE database.

11 RBPs can affect the splicing of AGT :

The Knockdown/knockout RNA-Seq assay for AGT is not avaliable on ENCORE database.