WNK4

General Information

Gene Name : WNK4
Gene ID : ENSG00000126562.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: WNK4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	WNK4	ENSG00000126562.16	0.00	0.01	0.01	ENCSR000AEF
HepG2	WNK4	ENSG00000126562.16	7.20	4.02	5.61	ENCSR985KAT
K562	WNK4	ENSG00000126562.16	11.01	7.91	9.46	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for WNK4 is not avaliable on ENCORE database.

Proteins bound to RNA

WNK4 RNA is bound by 24 proteins.

CanvasJS.com

eCLIP assay for WNK4 is not avaliable on ENCORE database.

24 proteins are bound to WNK4 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	40946890	40947101	+	3'-UTR,CDS,intron-Distal	5.22247	57.06719	HepG2	DDX59
chr17	40946891	40946995	+	3'-UTR,CDS,intron-Distal	6.04696	56.09773	HepG2	HNRNPK
chr17	40947248	40947385	+	3'-UTR,CDS,intron-Distal	4.57073	29.64252	HepG2	HNRNPK
chr17	40946880	40947058	+	3'-UTR,CDS,intron-Distal	5.11677	28.74978	HepG2	PCBP2
chr17	40937007	40937127	+	CDS,intron-Distal,intron-Proximal	6.49852	27.31949	HepG2	PRPF4
chr17	40947218	40947374	+	3'-UTR,CDS,intron-Distal	6.52560	25.02099	K562	PCBP1
chr17	40947262	40947341	+	3'-UTR,CDS,intron-Distal	5.47796	24.75468	HepG2	DDX59
chr17	40946889	40947116	+	3'-UTR,CDS,intron-Distal	4.68220	24.70524	K562	HNRNPK
chr17	40935894	40936000	+	CDS,intron-Proximal	4.93542	20.94359	K562	SF3B4
chr17	40947143	40947217	+	3'-UTR,CDS,intron-Distal	3.98285	17.79691	HepG2	DDX59
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 79 entries

eCLIP assay for WNK4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for WNK4 is not available on ENCORE database.
146 RBPs can affect the levels of WNK4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for WNK4 is not available on ENCORE database.

146 RBPs can affect the gene expression of WNK4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
WNK4	ENSG00000126562.12	95.69980	1257.35050	-3.71570	179.04650	176.80920	HepG2	SRSF1
WNK4	ENSG00000126562.12	1963.60780	459.84210	2.09420	117.45330	114.66730	HepG2	SRSF7
WNK4	ENSG00000126562.12	3100.01040	556.74140	2.47710	100.55800	97.50400	HepG2	CPSF6
WNK4	ENSG00000126562.12	335.10800	1287.67050	-1.94210	72.26250	70.43110	HepG2	NELFE
WNK4	ENSG00000126562.12	292.44040	1092.65610	-1.90160	69.60670	67.91270	HepG2	SSB
WNK4	ENSG00000126562.12	2961.75640	862.63100	1.77950	68.65040	65.82520	K562	HNRNPC
WNK4	ENSG00000126562.12	87.68530	600.13830	-2.77490	58.79380	56.35440	HepG2	DDX21
WNK4	ENSG00000126562.12	1915.06940	606.46830	1.65880	46.17710	44.30440	HepG2	BOP1
WNK4	ENSG00000126562.12	386.26980	1809.31650	-2.22780	46.15280	43.39800	HepG2	SF3A3
WNK4	ENSG00000126562.12	2936.70520	1253.03260	1.22870	44.30990	42.37150	HepG2	QKI
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 181 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for WNK4 is not available on ENCORE database.

13 RBPs can affect the splicing of WNK4 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	WNK4	ENSG00000126562.12	chr17	+	40939795	40939917	40939295	40939560	40940147	40940206	-0.26200	0.00000	0.00017	excluded	HepG2	PCBP1
SE	WNK4	ENSG00000126562.12	chr17	+	40939795	40939917	40939295	40939560	40940147	40940206	-0.27800	0.00000	0.00003	excluded	HepG2	SRSF9
A3SS	WNK4	ENSG00000126562.12	chr17	+	40948112	40948340	40948140	40948340	40947642	40948051	0.32700	0.00000	0.00000	longer	HepG2	RBM22
SE	WNK4	ENSG00000126562.12	chr17	+	40946286	40946447	40945609	40945747	40946631	40946686	0.05200	0.00002	0.00161	included	K562	SF3B1
A3SS	WNK4	ENSG00000126562.12	chr17	+	40948112	40948340	40948140	40948340	40947967	40948051	0.26000	0.00003	0.00908	longer	K562	RBM22
SE	WNK4	ENSG00000126562.12	chr17	+	40936849	40936934	40936439	40936597	40937114	40937203	0.10900	0.00006	0.00249	included	HepG2	HNRNPK
SE	WNK4	ENSG00000126562.12	chr17	+	40945609	40945747	40940698	40940815	40946631	40946686	-0.13000	0.00017	0.01003	excluded	K562	SF3B1
SE	WNK4	ENSG00000126562.12	chr17	+	40939795	40939917	40939295	40939560	40940147	40940206	-0.24900	0.00031	0.04210	excluded	HepG2	PCBP2
SE	WNK4	ENSG00000126562.12	chr17	+	40945609	40945747	40940698	40940815	40946631	40946686	-0.11700	0.00035	0.04437	excluded	K562	FMR1
SE	WNK4	ENSG00000126562.12	chr17	+	40945609	40945747	40940698	40940815	40946631	40946686	0.14100	0.00065	0.05524	included	HepG2	DDX6

Showing 1 to 10 of 17 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

WNK4

General Information

Functions

Localization

Domains (AlphaFold: WNK4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for WNK4 is not avaliable on ENCORE database.

24 proteins are bound to WNK4 RNA:

eCLIP assay for WNK4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for WNK4 is not available on ENCORE database.

146 RBPs can affect the gene expression of WNK4 :

The Knockdown/knockout RNA-Seq assay for WNK4 is not available on ENCORE database.

13 RBPs can affect the splicing of WNK4 :

The Knockdown/knockout RNA-Seq assay for WNK4 is not avaliable on ENCORE database.