TNFRSF14

General Information

Gene Name : TNFRSF14
Gene ID : ENSG00000157873.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TNFRSF14)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TNFRSF14	ENSG00000157873.17	3.00	13.04	8.02	ENCSR000AEF
HepG2	TNFRSF14	ENSG00000157873.17	9.57	2.02	5.79	ENCSR985KAT
K562	TNFRSF14	ENSG00000157873.17	0.64	0.39	0.52	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TNFRSF14 is not avaliable on ENCORE database.

Proteins bound to RNA

TNFRSF14 RNA is bound by 12 proteins.

CanvasJS.com

eCLIP assay for TNFRSF14 is not avaliable on ENCORE database.

12 proteins are bound to TNFRSF14 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	2494039	2494155	+	intron-Distal	4.42301	12.86851	HepG2	XPO5
chr1	2494798	2494991	+	3'-UTR,intron-Distal	3.99724	9.47718	HepG2	UPF1
chr1	2491335	2491419	+	CDS,intron-Proximal	4.77141	9.28243	HepG2	PPIG
chr1	2488006	2488060	+	5'-UTR,intron-Distal,intron-Proximal	4.86974	8.98750	HepG2	U2AF2
chr1	2494826	2494953	+	3'-UTR,intron-Distal	3.95282	8.10313	HepG2	PABPN1
chr1	2491122	2491230	+	intron-Distal,intron-Proximal	4.70297	7.43709	HepG2	SF3A3
chr1	2489996	2490134	+	intron-Distal,intron-Proximal	3.28234	5.60501	HepG2	HNRNPK
chr1	2489781	2489839	+	CDS,intron-Distal,intron-Proximal	4.93993	5.52963	HepG2	PPIG
chr1	2490890	2490967	+	intron-Distal	3.05909	5.46216	HepG2	RBFOX2
chr1	2491418	2491504	+	intron-Proximal	4.78459	4.65563	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 23 entries

eCLIP assay for TNFRSF14 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TNFRSF14 is not available on ENCORE database.
129 RBPs can affect the levels of TNFRSF14.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TNFRSF14 is not available on ENCORE database.

129 RBPs can affect the gene expression of TNFRSF14 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TNFRSF14	ENSG00000157873.13	2268.52540	222.69770	3.34850	117.05560	114.72700	HepG2	TIAL1
TNFRSF14	ENSG00000157873.13	930.72380	229.27900	2.02110	46.12240	44.25120	HepG2	BOP1
TNFRSF14	ENSG00000157873.13	674.55460	204.08900	1.72460	43.58300	41.51010	HepG2	SAFB2
TNFRSF14	ENSG00000157873.13	914.10680	329.14430	1.47350	43.53770	41.46610	HepG2	SLBP
TNFRSF14	ENSG00000157873.13	810.34770	295.97910	1.45290	37.29430	35.34080	HepG2	SRSF7
TNFRSF14	ENSG00000157873.13	740.55630	301.26840	1.29750	28.81370	26.88150	HepG2	HNRNPF
TNFRSF14	ENSG00000157873.13	587.02400	205.43690	1.51460	28.63050	26.64240	HepG2	DNAJC21
TNFRSF14	ENSG00000157873.13	252.86600	649.89190	-1.36180	25.56190	24.02290	HepG2	UTP3
TNFRSF14	ENSG00000157873.13	629.31840	210.48620	1.58000	23.37270	21.61860	HepG2	CPSF6
TNFRSF14	ENSG00000157873.13	790.67760	296.66550	1.41420	23.10710	21.26470	HepG2	IGF2BP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 158 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TNFRSF14 is not available on ENCORE database.

8 RBPs can affect the splicing of TNFRSF14 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
RI	TNFRSF14	ENSG00000157873.13	chr1	+	2489781	2491417	2489781	2489907	2491261	2491417	0.42000	0.00000	0.00008	included	HepG2	U2AF2
RI	TNFRSF14	ENSG00000157873.13	chr1	+	2489781	2491417	2489781	2489907	2491261	2491417	0.38200	0.00000	0.00000	included	HepG2	SF3B4
RI	TNFRSF14	ENSG00000157873.13	chr1	+	2489781	2491417	2489781	2489907	2491261	2491417	0.51300	0.00000	0.00001	included	HepG2	HNRNPK
RI	TNFRSF14	ENSG00000157873.13	chr1	+	2489781	2491417	2489781	2489907	2491261	2491417	0.28200	0.00001	0.00087	included	HepG2	MATR3
RI	TNFRSF14	ENSG00000157873.13	chr1	+	2489781	2491417	2489781	2489907	2491261	2491417	0.30400	0.00001	0.00040	included	HepG2	NCBP2
RI	TNFRSF14	ENSG00000157873.13	chr1	+	2489781	2491417	2489781	2489907	2491261	2491417	0.33800	0.00008	0.00138	included	HepG2	U2AF1
RI	TNFRSF14	ENSG00000157873.13	chr1	+	2489781	2491417	2489781	2489907	2491261	2491417	0.19200	0.00020	0.00351	included	HepG2	QKI
RI	TNFRSF14	ENSG00000157873.13	chr1	+	2489781	2491417	2489781	2489907	2491261	2491417	0.21800	0.00149	0.02784	included	HepG2	FUBP3

Showing 1 to 8 of 8 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TNFRSF14

General Information

Functions

Localization

Domains (AlphaFold: TNFRSF14)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TNFRSF14 is not avaliable on ENCORE database.

12 proteins are bound to TNFRSF14 RNA:

eCLIP assay for TNFRSF14 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TNFRSF14 is not available on ENCORE database.

129 RBPs can affect the gene expression of TNFRSF14 :

The Knockdown/knockout RNA-Seq assay for TNFRSF14 is not available on ENCORE database.

8 RBPs can affect the splicing of TNFRSF14 :

The Knockdown/knockout RNA-Seq assay for TNFRSF14 is not avaliable on ENCORE database.