TCEA2

General Information

Gene Name : TCEA2
Gene ID : ENSG00000171703.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TCEA2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TCEA2	ENSG00000171703.16	1.75	7.36	4.55	ENCSR000AEF
HepG2	TCEA2	ENSG00000171703.16	26.96	9.89	18.43	ENCSR985KAT
K562	TCEA2	ENSG00000171703.16	6.11	3.37	4.74	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TCEA2 is not avaliable on ENCORE database.

Proteins bound to RNA

TCEA2 RNA is bound by 20 proteins.

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eCLIP assay for TCEA2 is not avaliable on ENCORE database.

20 proteins are bound to TCEA2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr20	62695330	62695402	+	intron-Distal,intron-Proximal	5.49419	28.02966	HepG2	PCBP2
chr20	62695402	62695452	+	5'-UTR,intron-Distal	6.12448	27.65050	HepG2	PCBP2
chr20	62695019	62695143	+	5'-UTR,intron-Distal	3.60148	25.63309	HepG2	DDX59
chr20	62695143	62695224	+	5'-UTR,intron-Distal,intron-Proximal	3.82244	19.69927	HepG2	DDX59
chr20	62695010	62695119	+	5'-UTR,intron-Distal	4.74310	17.98347	HepG2	PCBP2
chr20	62688116	62688218	+	intron-Distal	4.30153	17.90410	HepG2	CSTF2T
chr20	62695058	62695198	+	5'-UTR,intron-Distal,intron-Proximal	5.35004	17.61186	HepG2	PCBP1
chr20	62685406	62685481	+	intron-Distal	6.05588	17.19364	HepG2	CSTF2T
chr20	62683350	62683428	+	intron-Distal	4.07515	16.22298	HepG2	CSTF2T
chr20	62687496	62687583	+	intron-Distal	4.19089	15.87615	HepG2	CSTF2T
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 91 entries

eCLIP assay for TCEA2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TCEA2 is not available on ENCORE database.
101 RBPs can affect the levels of TCEA2.

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The Knockdown/knockout RNA-Seq assay for TCEA2 is not available on ENCORE database.

101 RBPs can affect the gene expression of TCEA2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TCEA2	ENSG00000171703.12	1598.52400	389.80580	2.03580	46.50220	44.29200	HepG2	GPKOW
TCEA2	ENSG00000171703.12	1220.86200	482.90160	1.33800	43.05230	41.61260	HepG2	SSB
TCEA2	ENSG00000171703.12	268.53220	690.80620	-1.36320	26.31750	25.18420	HepG2	SRSF1
TCEA2	ENSG00000171703.12	348.79070	119.49540	1.54530	20.94720	19.40660	HepG2	SAFB2
TCEA2	ENSG00000171703.12	384.79730	130.38850	1.56120	19.96520	18.84720	HepG2	TIAL1
TCEA2	ENSG00000171703.12	220.86410	666.91890	-1.59440	19.49750	17.77830	HepG2	U2AF1
TCEA2	ENSG00000171703.12	302.49950	624.72920	-1.04630	16.96160	15.66480	HepG2	PCBP1
TCEA2	ENSG00000171703.12	516.26560	176.90740	1.54500	16.66170	14.91370	HepG2	XRN2
TCEA2	ENSG00000171703.12	324.56980	131.54730	1.30280	15.13480	13.96470	HepG2	TRIM56
TCEA2	ENSG00000171703.12	501.71080	256.88530	0.96560	14.22300	12.85060	HepG2	SLBP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 110 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TCEA2 is not available on ENCORE database.

8 RBPs can affect the splicing of TCEA2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TCEA2	ENSG00000171703.12	chr20	+	62695244	62695302	62694589	62694737	62697828	62697891	0.26400	0.00000	0.00002	included	HepG2	SRSF1
RI	TCEA2	ENSG00000171703.12	chr20	+	62701117	62701767	62701117	62701174	62701612	62701767	0.37200	0.00001	0.00035	included	HepG2	FUBP3
RI	TCEA2	ENSG00000171703.12	chr20	+	62703222	62703699	62703222	62703294	62703524	62703699	0.40900	0.00020	0.00609	included	HepG2	PCBP2
RI	TCEA2	ENSG00000171703.12	chr20	+	62701117	62701988	62701117	62701767	62701841	62701988	0.34900	0.00146	0.00947	included	K562	AQR
RI	TCEA2	ENSG00000171703.12	chr20	+	62703222	62703699	62703222	62703294	62703524	62703699	0.34100	0.00212	0.01332	included	K562	AQR
RI	TCEA2	ENSG00000171703.12	chr20	+	62701117	62701767	62701117	62701174	62701612	62701767	-0.49700	0.00229	0.02285	excluded	K562	AKAP8L
SE	TCEA2	ENSG00000171703.12	chr20	+	62695244	62695302	62694589	62694737	62697828	62697891	0.40600	0.00620	0.06295	included	HepG2	U2AF2
RI	TCEA2	ENSG00000171703.12	chr20	+	62701117	62701988	62701117	62701767	62701841	62701988	0.09500	0.00904	0.07067	included	HepG2	RBM22
RI	TCEA2	ENSG00000171703.12	chr20	+	62703222	62703699	62703222	62703294	62703524	62703699	0.16000	0.01162	0.09721	included	HepG2	HNRNPK

Showing 1 to 9 of 9 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TCEA2

General Information

Functions

Localization

Domains (AlphaFold: TCEA2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TCEA2 is not avaliable on ENCORE database.

20 proteins are bound to TCEA2 RNA:

eCLIP assay for TCEA2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TCEA2 is not available on ENCORE database.

101 RBPs can affect the gene expression of TCEA2 :

The Knockdown/knockout RNA-Seq assay for TCEA2 is not available on ENCORE database.

8 RBPs can affect the splicing of TCEA2 :

The Knockdown/knockout RNA-Seq assay for TCEA2 is not avaliable on ENCORE database.