SRC

General Information

Gene Name : SRC
Gene ID : ENSG00000197122.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SRC)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SRC	ENSG00000197122.11	12.81	22.56	17.68	ENCSR000AEF
HepG2	SRC	ENSG00000197122.11	111.63	76.54	94.09	ENCSR985KAT
K562	SRC	ENSG00000197122.11	5.99	3.60	4.79	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SRC is not avaliable on ENCORE database.

Proteins bound to RNA

SRC RNA is bound by 43 proteins.

CanvasJS.com

eCLIP assay for SRC is not avaliable on ENCORE database.

43 proteins are bound to SRC RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr20	36015406	36015493	+	intron-Distal	5.84274	400.00000	HepG2	RBFOX2
chr20	36014883	36014978	+	intron-Distal,intron-Proximal	7.41649	189.81140	HepG2	RBFOX2
chr20	36014978	36015036	+	intron-Distal,intron-Proximal	7.07974	65.98815	HepG2	RBFOX2
chr20	36014608	36014705	+	intron-Distal,intron-Proximal	5.04906	56.43812	HepG2	RBFOX2
chr20	36032106	36032210	+	3'-UTR	5.68618	51.29561	HepG2	AKAP1
chr20	36031979	36032105	+	3'-UTR	6.23250	49.33718	HepG2	UPF1
chr20	36033644	36033721	+	3'-UTR	4.14597	47.65279	HepG2	DDX55
chr20	36001485	36001560	+	intron-Distal	6.49935	46.70899	HepG2	HNRNPL
chr20	36014779	36014883	+	CDS,intron-Distal,intron-Proximal	5.19183	44.66124	HepG2	RBFOX2
chr20	36015179	36015242	+	intron-Distal	4.65476	43.10557	HepG2	RBFOX2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 280 entries

eCLIP assay for SRC is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SRC is not available on ENCORE database.
104 RBPs can affect the levels of SRC.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SRC is not available on ENCORE database.

104 RBPs can affect the gene expression of SRC :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SRC	ENSG00000197122.7	1826.61380	4086.91850	-1.16180	64.64140	63.04230	HepG2	SRSF1
SRC	ENSG00000197122.7	5336.47840	2931.32190	0.86420	43.27130	41.21420	HepG2	UPF1
SRC	ENSG00000197122.7	1756.28230	3673.59230	-1.06470	40.12510	38.31930	HepG2	TAF15
SRC	ENSG00000197122.7	1508.01850	2777.08400	-0.88090	30.91160	29.28020	HepG2	DKC1
SRC	ENSG00000197122.7	2408.69260	4185.43470	-0.79710	29.98760	28.60650	HepG2	NELFE
SRC	ENSG00000197122.7	8208.86160	4937.22010	0.73340	30.00380	28.39090	HepG2	ETF1
SRC	ENSG00000197122.7	3899.75030	2296.32630	0.76400	25.92860	24.22910	HepG2	HNRNPU
SRC	ENSG00000197122.7	1491.44600	3718.88440	-1.31820	25.47830	23.58140	HepG2	EIF4A3
SRC	ENSG00000197122.7	2529.72400	4046.47290	-0.67770	24.45790	23.26970	HepG2	SSB
SRC	ENSG00000197122.7	7489.09550	3501.71340	1.09660	19.35580	17.91720	HepG2	DDX6
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 112 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SRC is not available on ENCORE database.

12 RBPs can affect the splicing of SRC :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	SRC	ENSG00000197122.7	chr20	+	36013516	36013638			36012725	36012806	36014477	36014577	0.50700	0.00000	0.00000	included	HepG2	HNRNPL
SE	SRC	ENSG00000197122.7	chr20	+	35973451	35973632			35973087	35973290	35993606	35993680	0.22000	0.00000	0.00000	included	HepG2	SUPV3L1
SE	SRC	ENSG00000197122.7	chr20	+	35973451	35973632			35973087	35973290	35993606	35993680	-0.06100	0.00000	0.00040	excluded	HepG2	SF3B4
SE	SRC	ENSG00000197122.7	chr20	+	35973451	35973632			35973087	35973290	35993606	35993680	0.07600	0.00002	0.00274	included	HepG2	NCBP2
MXE	SRC	ENSG00000197122.7	chr20	+	35973451	35973632	35975520	35975639	35973087	35973290	35993606	35993680	-0.47600	0.00002	0.00118	2included	HepG2	SF3B4
MXE	SRC	ENSG00000197122.7	chr20	+	35973475	35973632	35975520	35975639	35973087	35973290	35993606	35993680	-0.47800	0.00002	0.00336	2included	HepG2	G3BP1
MXE	SRC	ENSG00000197122.7	chr20	+	35973451	35973632	35975520	35975639	35973087	35973290	35993606	35993680	-0.31800	0.00003	0.00261	2included	HepG2	PTBP1
SE	SRC	ENSG00000197122.7	chr20	+	35973451	35973632			35973087	35973290	35993606	35993680	0.06500	0.00004	0.04373	included	HepG2	PPIG
SE	SRC	ENSG00000197122.7	chr20	+	35973451	35973632			35973087	35973290	35993606	35993680	-0.06300	0.00004	0.00175	excluded	HepG2	SRSF1
SE	SRC	ENSG00000197122.7	chr20	+	35973451	35973632			35973087	35973290	35993606	35993680	0.06100	0.00022	0.00767	included	HepG2	HNRNPK

Showing 1 to 10 of 16 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SRC

General Information

Functions

Localization

Domains (AlphaFold: SRC)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SRC is not avaliable on ENCORE database.

43 proteins are bound to SRC RNA:

eCLIP assay for SRC is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SRC is not available on ENCORE database.

104 RBPs can affect the gene expression of SRC :

The Knockdown/knockout RNA-Seq assay for SRC is not available on ENCORE database.

12 RBPs can affect the splicing of SRC :

The Knockdown/knockout RNA-Seq assay for SRC is not avaliable on ENCORE database.