RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
---|
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
---|---|---|---|---|---|---|---|---|
chr16 | 18818032 | 18818108 | - | 3'-UTR,intron-Distal | 4.61262 | 50.72455 | HepG2 | PCBP2 |
chr16 | 18820169 | 18820279 | - | 3'-UTR,intron-Distal | 5.26789 | 43.61375 | HepG2 | PCBP2 |
chr16 | 18861633 | 18861733 | - | CDS,intron-Distal,intron-Proximal | 4.24571 | 40.80984 | HepG2 | BCLAF1 |
chr16 | 18895393 | 18895456 | - | CDS,intron-Distal,intron-Proximal | 4.22337 | 40.19767 | HepG2 | BCLAF1 |
chr16 | 18849919 | 18850010 | - | CDS,intron-Distal | 4.15719 | 39.52786 | HepG2 | BCLAF1 |
chr16 | 18865084 | 18865149 | - | CDS,intron-Distal | 5.58889 | 36.79929 | HepG2 | BCLAF1 |
chr16 | 18856751 | 18856846 | - | CDS,intron-Distal | 4.78837 | 36.11809 | HepG2 | BCLAF1 |
chr16 | 18827725 | 18827844 | - | CDS,intron-Distal | 3.71052 | 32.29037 | HepG2 | BCLAF1 |
chr16 | 18865149 | 18865171 | - | CDS,intron-Distal | 5.54936 | 31.51220 | HepG2 | BCLAF1 |
chr16 | 18845625 | 18845719 | - | CDS,intron-Distal | 4.03312 | 31.24544 | HepG2 | BCLAF1 |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
SMG1 | ENSG00000157106.12 | 10624.11850 | 4865.55500 | 1.12660 | 83.85640 | 81.70410 | HepG2 | SRSF9 | |
SMG1 | ENSG00000157106.12 | 10340.01410 | 5729.45420 | 0.85170 | 45.47400 | 43.64110 | HepG2 | SF3B4 | |
SMG1 | ENSG00000157106.12 | 8994.70630 | 5375.89390 | 0.74250 | 25.74410 | 24.26530 | HepG2 | TAF15 | |
SMG1 | ENSG00000157106.12 | 6503.62070 | 3357.95080 | 0.95360 | 25.25620 | 23.00260 | HepG2 | FUBP3 | |
SMG1 | ENSG00000157106.12 | 8528.80230 | 5704.60630 | 0.58010 | 21.62670 | 20.18320 | HepG2 | RECQL | |
SMG1 | ENSG00000157106.12 | 4453.87840 | 8605.83800 | -0.95030 | 21.87440 | 19.82080 | K562 | HSPD1 | |
SMG1 | ENSG00000157106.12 | 6116.43430 | 9011.66510 | -0.55910 | 20.90180 | 19.49440 | HepG2 | PUS1 | |
SMG1 | ENSG00000157106.12 | 4421.51690 | 6328.32390 | -0.51730 | 20.98850 | 19.34720 | HepG2 | DNAJC2 | |
SMG1 | ENSG00000157106.12 | 4653.64470 | 6982.79120 | -0.58540 | 20.45850 | 19.10470 | HepG2 | TRIM56 | |
SMG1 | ENSG00000157106.12 | 4441.49030 | 6343.03330 | -0.51410 | 18.96450 | 17.49820 | HepG2 | SAFB2 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SE | SMG1 | ENSG00000157106.12 | chr16 | - | 18841540 | 18841691 | 18841247 | 18841437 | 18844261 | 18844488 | -0.32700 | 0.00000 | 0.00000 | excluded | HepG2 | U2AF1 | |||
SE | SMG1 | ENSG00000157106.12 | chr16 | - | 18841540 | 18841691 | 18841247 | 18841437 | 18844261 | 18844488 | -0.25400 | 0.00000 | 0.00000 | excluded | HepG2 | U2AF2 | |||
A3SS | SMG1 | ENSG00000157106.12 | chr16 | - | 18844261 | 18844510 | 18844261 | 18844488 | 18845525 | 18845760 | 0.11700 | 0.00000 | 0.00002 | longer | K562 | AQR | |||
A3SS | SMG1 | ENSG00000157106.12 | chr16 | - | 18830823 | 18831026 | 18830823 | 18830976 | 18839352 | 18839493 | 0.20500 | 0.00000 | 0.00005 | longer | K562 | AQR | |||
SE | SMG1 | ENSG00000157106.12 | chr16 | - | 18841540 | 18841691 | 18841247 | 18841437 | 18844261 | 18844488 | -0.13000 | 0.00001 | 0.00060 | excluded | HepG2 | SF3A3 | |||
A3SS | SMG1 | ENSG00000157106.12 | chr16 | - | 18841540 | 18841737 | 18841540 | 18841691 | 18844261 | 18844488 | 0.09000 | 0.00005 | 0.00042 | longer | K562 | AQR | |||
A3SS | SMG1 | ENSG00000157106.12 | chr16 | - | 18858774 | 18858967 | 18858774 | 18858929 | 18859137 | 18859355 | 0.12900 | 0.00022 | 0.00177 | longer | K562 | AQR | |||
SE | SMG1 | ENSG00000157106.12 | chr16 | - | 18881175 | 18881316 | 18880425 | 18880625 | 18881931 | 18882033 | -0.19200 | 0.00037 | 0.01252 | excluded | K562 | AGGF1 | |||
SE | SMG1 | ENSG00000157106.12 | chr16 | - | 18881175 | 18881316 | 18880425 | 18880625 | 18881931 | 18882033 | -0.18900 | 0.00080 | 0.02302 | excluded | K562 | RBM15 | |||
MXE | SMG1 | ENSG00000157106.12 | chr16 | - | 18856750 | 18856973 | 18858774 | 18858967 | 18853529 | 18853776 | 18859137 | 18859355 | 0.09500 | 0.00102 | 0.00927 | 1included | K562 | AQR |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".