SLC17A2

General Information

Gene Name       : SLC17A2
Gene ID             : ENSG00000112337.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC17A2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC17A2ENSG00000112337.100.000.000.00ENCSR000AEF
HepG2SLC17A2ENSG00000112337.104.256.075.16ENCSR985KAT
K562SLC17A2ENSG00000112337.100.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC17A2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC17A2 RNA is bound by 3 proteins.  







eCLIP assay for SLC17A2 is not avaliable on ENCORE database.





3 proteins are bound to SLC17A2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr62591719525917231-CDS,intron-Distal,intron-Proximal3.033783.11350HepG2BCLAF1
chr62591723125917266-CDS,intron-Distal3.080343.85381HepG2BCLAF1
chr62591604525916109-CDS,intron-Distal,intron-Proximal4.003844.95320HepG2U2AF2
chr62591728025917326-CDS,intron-Distal,intron-Proximal4.050693.76090HepG2U2AF2
chr62591809525918159-intron-Distal5.701347.53537HepG2U2AF2
chr62591565125915708-intron-Distal,intron-Proximal3.612153.96838HepG2TIAL1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC17A2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC17A2 is not available on ENCORE database.

  • 125 RBPs can affect the levels of SLC17A2.  








The Knockdown/knockout RNA-Seq assay for SLC17A2 is not available on ENCORE database.





125 RBPs can affect the gene expression of SLC17A2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC17A2ENSG00000112337.6831.41130317.059701.3907018.3887016.34940HepG2ABCF1
SLC17A2ENSG00000112337.682.29200259.69260-1.6580018.4693017.19700HepG2ACO1
SLC17A2ENSG00000112337.6404.00250197.911201.029409.325707.64040HepG2ADAR
SLC17A2ENSG00000112337.677.370901047.62220-3.7592091.9448089.62770HepG2AKAP1
SLC17A2ENSG00000112337.6658.02160286.095101.2015015.3637012.54570HepG2ATP5C1
SLC17A2ENSG00000112337.6458.03160358.783000.352201.999101.39880HepG2AUH
SLC17A2ENSG00000112337.6211.1983099.504901.085706.238605.38160HepG2BOP1
SLC17A2ENSG00000112337.6338.87220237.536800.512502.845201.59550HepG2BUD13
SLC17A2ENSG00000112337.6307.93120212.178100.537202.804302.02780HepG2CALR
SLC17A2ENSG00000112337.61448.38770823.542400.8144010.555309.13260HepG2CIRBP
SLC17A2ENSG00000112337.6913.64460259.598601.8153061.2712059.12880HepG2CKAP4
SLC17A2ENSG00000112337.6210.788701283.29800-2.6060029.5360027.15170HepG2CNOT7
SLC17A2ENSG00000112337.6258.3690091.345701.4999011.7590010.45350HepG2CPSF6
SLC17A2ENSG00000112337.6489.55680261.091200.906808.516606.68620HepG2CPSF7
SLC17A2ENSG00000112337.6134.67390292.89850-1.120909.822908.75380HepG2CELF1
SLC17A2ENSG00000112337.6507.98000314.895000.689808.567707.37340HepG2DAZAP1
SLC17A2ENSG00000112337.6370.58620240.161200.625705.795704.64730HepG2DDX19B
SLC17A2ENSG00000112337.6155.88630295.56800-0.923006.600205.60260HepG2DDX21
SLC17A2ENSG00000112337.6683.45030289.094901.2412018.8030016.66060HepG2DDX24
SLC17A2ENSG00000112337.6247.50780142.056300.800903.919602.26350HepG2DDX28
SLC17A2ENSG00000112337.6454.737501003.55740-1.1420015.4070014.05030HepG2DDX3X
SLC17A2ENSG00000112337.6437.14890103.731502.0752018.1834015.91840HepG2DDX59
SLC17A2ENSG00000112337.6560.77620313.755200.837707.885906.26790HepG2DDX5
SLC17A2ENSG00000112337.61287.58490862.042100.578704.687903.90220HepG2DDX6
SLC17A2ENSG00000112337.6813.59150248.445801.7113043.9921042.13560HepG2DKC1
SLC17A2ENSG00000112337.6277.38020199.270100.477002.529001.85190HepG2DNAJC21
SLC17A2ENSG00000112337.6528.69700197.549101.4201028.6572026.77280HepG2DNAJC2
SLC17A2ENSG00000112337.6478.68880268.124600.836106.226304.89620HepG2EEF2
SLC17A2ENSG00000112337.6620.63660272.055701.1897011.698609.58790HepG2AGO1
SLC17A2ENSG00000112337.6135.32280828.73620-2.6145054.2845051.98140HepG2EIF2S1
SLC17A2ENSG00000112337.6410.91370279.022100.558403.736802.50540HepG2EIF3G
SLC17A2ENSG00000112337.6718.68420915.86740-0.349801.834201.30950HepG2EIF4A3
SLC17A2ENSG00000112337.61480.78200891.693900.731605.947304.96700HepG2EIF4B
SLC17A2ENSG00000112337.6750.74600310.700101.2727027.2083025.17420HepG2EIF4G1
SLC17A2ENSG00000112337.6575.17420297.624200.9504010.210208.69430HepG2EIF4G2
SLC17A2ENSG00000112337.6750.36560274.644601.4499022.0614019.50640HepG2ESF1
SLC17A2ENSG00000112337.61241.97910411.987601.5919026.9578025.40910HepG2ETF1
SLC17A2ENSG00000112337.6362.06200253.732800.512803.056802.18100HepG2EWSR1
SLC17A2ENSG00000112337.6125.16000194.53770-0.636302.955601.74350HepG2FAM120A
SLC17A2ENSG00000112337.6391.37300281.591700.474802.641101.52040HepG2FASTKD2
SLC17A2ENSG00000112337.689.94250320.15110-1.8317016.0849014.48820HepG2FIP1L1
SLC17A2ENSG00000112337.6235.5084091.513101.363603.840802.64310HepG2FTO
SLC17A2ENSG00000112337.6456.36860634.03930-0.474403.452602.57740HepG2FUBP3
SLC17A2ENSG00000112337.6229.71160924.02180-2.0081039.4443037.21170HepG2FXR1
SLC17A2ENSG00000112337.6349.56770857.19210-1.2940017.6542016.04940HepG2G3BP1
SLC17A2ENSG00000112337.61253.04110909.984900.461403.722202.67840HepG2G3BP2
SLC17A2ENSG00000112337.6171.14720277.17980-0.695602.987701.92840HepG2GNB2L1
SLC17A2ENSG00000112337.61018.70970103.533203.2985080.5224077.72770HepG2GPKOW
SLC17A2ENSG00000112337.6369.51130247.909300.575704.718603.47540HepG2HDGF
SLC17A2ENSG00000112337.6395.58350201.179600.975408.243507.21420HepG2HNRNPA1
SLC17A2ENSG00000112337.6454.94620289.418100.652406.305904.99400HepG2HNRNPA2B1
SLC17A2ENSG00000112337.6488.75200107.965902.1784039.6932037.54320HepG2HNRNPF
SLC17A2ENSG00000112337.6569.64140286.832300.989706.866005.84820HepG2HNRNPL
SLC17A2ENSG00000112337.61181.9488098.804903.58030108.24490105.37320HepG2HNRNPLL
SLC17A2ENSG00000112337.6120.16760220.88190-0.878205.089703.84050HepG2HNRNPM
SLC17A2ENSG00000112337.6594.10320222.307401.4181028.3787026.60320HepG2HNRNPU
SLC17A2ENSG00000112337.6505.18700106.311202.2484011.292709.92570HepG2IGF2BP1
SLC17A2ENSG00000112337.61406.25240871.326400.690507.499406.44440HepG2IGF2BP2
SLC17A2ENSG00000112337.6310.13020817.66450-1.398607.301005.75650HepG2IGF2BP3
SLC17A2ENSG00000112337.6695.658201250.93470-0.846606.034004.01660HepG2ILF3
SLC17A2ENSG00000112337.61617.808901222.018600.404702.527401.40160HepG2KHDRBS1
SLC17A2ENSG00000112337.6646.71370876.38790-0.438402.285601.38740HepG2KHSRP
SLC17A2ENSG00000112337.6174.63750271.66780-0.637502.681201.56540HepG2LARP7
SLC17A2ENSG00000112337.61426.92010924.344200.626306.270205.29200HepG2MAGOH
SLC17A2ENSG00000112337.6141.70700229.90310-0.698103.037201.34990HepG2MARK2
SLC17A2ENSG00000112337.6323.43800929.52580-1.5230022.2355020.58510HepG2MATR3
SLC17A2ENSG00000112337.6110.01590227.78820-1.050004.213102.92710HepG2METAP2
SLC17A2ENSG00000112337.6494.15470100.799402.2934024.4162021.76530HepG2MTPAP
SLC17A2ENSG00000112337.6347.12330217.566900.673904.443002.90400HepG2NAA15
SLC17A2ENSG00000112337.6260.85330951.42790-1.8669033.9671031.95140HepG2NCBP2
SLC17A2ENSG00000112337.6532.5144087.619802.6034027.6763025.71200HepG2NSUN2
SLC17A2ENSG00000112337.6431.851701172.68930-1.4412011.730309.86960HepG2PABPC1
SLC17A2ENSG00000112337.6608.46800871.14960-0.517706.784805.90000HepG2PCBP1
SLC17A2ENSG00000112337.6775.19170338.919201.1935011.382409.49340HepG2PCBP2
SLC17A2ENSG00000112337.61397.65540988.715900.499303.649801.60850HepG2PPIG
SLC17A2ENSG00000112337.6647.43720241.884501.4203016.9253015.27720HepG2PRPF4
SLC17A2ENSG00000112337.6288.64170144.645800.996705.788404.66810HepG2PRPF8
SLC17A2ENSG00000112337.6374.02520886.39490-1.2448029.7166028.30030HepG2PTBP1
SLC17A2ENSG00000112337.61185.12040298.083301.9911051.0151048.85720HepG2PUF60
SLC17A2ENSG00000112337.6514.40360316.202600.702006.740705.71040HepG2PUM2
SLC17A2ENSG00000112337.6673.06530264.508301.3473029.0504027.44530HepG2PUS1
SLC17A2ENSG00000112337.6105.39470327.11590-1.6340010.432209.12970HepG2RAVER1
SLC17A2ENSG00000112337.6808.45990316.299801.3538026.5355024.35370HepG2RBM15
SLC17A2ENSG00000112337.6112.76600344.33360-1.6105010.002809.15540HepG2RBM22
SLC17A2ENSG00000112337.6404.14690871.28700-1.1083018.3794016.74370HepG2RBM25
SLC17A2ENSG00000112337.6164.24760327.60710-0.996104.319403.06420HepG2RBM27
SLC17A2ENSG00000112337.6442.66170178.484801.310304.299002.22550HepG2RBM39
SLC17A2ENSG00000112337.6748.88870986.49940-0.397604.417203.76200HepG2NELFE
SLC17A2ENSG00000112337.61093.77410918.741200.251502.084201.53920HepG2RECQL
SLC17A2ENSG00000112337.6283.68540116.372201.285406.629505.63670HepG2RPLP0
SLC17A2ENSG00000112337.6787.10260321.234401.2928012.6926010.83080HepG2RPS10
SLC17A2ENSG00000112337.639.61820211.79110-2.4184021.8770020.40870HepG2RPS19
SLC17A2ENSG00000112337.6900.819101287.87350-0.515703.354702.47500HepG2RPS3A
SLC17A2ENSG00000112337.6360.25350143.080801.3321010.050608.69010HepG2RRP9
SLC17A2ENSG00000112337.6635.00480355.760000.835805.430103.30400HepG2RTF1
SLC17A2ENSG00000112337.6427.67490197.967001.1112014.9394013.62420HepG2SAFB2
SLC17A2ENSG00000112337.6851.9350097.789103.1229080.5499077.67490HepG2SF3B1
SLC17A2ENSG00000112337.6514.69160922.90970-0.8425015.2055013.98590HepG2SF3B4
SLC17A2ENSG00000112337.6521.61270285.843800.867707.027305.99060HepG2SLBP
SLC17A2ENSG00000112337.670.10280230.85020-1.7194016.8292015.44710HepG2SMN1
SLC17A2ENSG00000112337.6499.97530333.260500.585103.213902.17300HepG2SMNDC1
SLC17A2ENSG00000112337.6511.90010108.810402.233907.237705.96770HepG2SNRNP70
SLC17A2ENSG00000112337.6315.80020178.625700.822003.304101.52730HepG2SRP68
SLC17A2ENSG00000112337.6386.17550963.29410-1.3187033.2827032.04000HepG2SRSF1
SLC17A2ENSG00000112337.6307.45910105.244901.546508.328706.51520HepG2SRSF3
SLC17A2ENSG00000112337.6484.91390106.088302.1924013.0892011.76900HepG2SRSF7
SLC17A2ENSG00000112337.61994.84900337.613202.56270125.62270123.57460HepG2SSB
SLC17A2ENSG00000112337.6463.23680305.683800.599602.774001.56880HepG2SUB1
SLC17A2ENSG00000112337.61529.155301026.866500.574404.226702.58000HepG2SUGP2
SLC17A2ENSG00000112337.6343.64880216.169600.668704.591303.39610HepG2SUPT6H
SLC17A2ENSG00000112337.6662.48560186.699401.8271023.1656021.55240HepG2SUPV3L1
SLC17A2ENSG00000112337.6461.3621096.342102.2596010.612309.32710HepG2TARDBP
SLC17A2ENSG00000112337.6435.19530215.965001.0108011.1368010.25040HepG2TIAL1
SLC17A2ENSG00000112337.6487.17460291.237400.742106.773505.31290HepG2TUFM
SLC17A2ENSG00000112337.6512.52430273.860700.904107.884906.82870HepG2U2AF1
SLC17A2ENSG00000112337.6519.18970204.178201.346304.416303.15910HepG2U2AF2
SLC17A2ENSG00000112337.6802.47950308.285001.3801017.2611015.16590HepG2UBE2L3
SLC17A2ENSG00000112337.6704.30510434.845300.695609.911408.73200HepG2UPF1
SLC17A2ENSG00000112337.61128.15010446.972601.3356037.7687034.55950HepG2UTP18
SLC17A2ENSG00000112337.6750.218601153.50960-0.620604.436003.03790HepG2XPO5
SLC17A2ENSG00000112337.6230.93960359.69140-0.639203.138502.00640HepG2XRCC6
SLC17A2ENSG00000112337.6571.98830183.785401.6379019.2327017.39400HepG2XRN2
SLC17A2ENSG00000112337.6534.64090238.751501.163008.830607.74410HepG2ZC3H8
SLC17A2ENSG00000112337.6859.04650478.248900.8449017.5901016.50520HepG2ZNF622
SLC17A2ENSG00000112337.6478.46580326.725800.550202.866801.54570HepG2ZRANB2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC17A2 is not available on ENCORE database.





9 RBPs can affect the splicing of SLC17A2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESLC17A2ENSG00000112337.6chr6-259159632591609625914807259148982591691225917074-0.610000.000000.00011excludedHepG2U2AF1
SESLC17A2ENSG00000112337.6chr6-2591572625915874259148072591489825915963259160960.157000.000000.00028includedHepG2HNRNPK
SESLC17A2ENSG00000112337.6chr6-2593050425930612259259962592610725930767259308390.193000.000360.05912includedHepG2TIA1
SESLC17A2ENSG00000112337.6chr6-2591572625915874259148072591489825915963259160960.111000.001160.08391includedHepG2DDX6
SESLC17A2ENSG00000112337.6chr6-2593050425930612259259962592610725930767259308390.154000.000080.06980includedHepG2PPIG
SESLC17A2ENSG00000112337.6chr6-259148072591489825912981259136792591572625915874-0.088000.002020.04440excludedHepG2SRSF1
SESLC17A2ENSG00000112337.6chr6-259157262591587425914807259148982591596325916096-0.287000.001310.03768excludedHepG2SF3A3
A5SSSLC17A2ENSG00000112337.6chr6-2593050425930839259307672593083925925996259261070.151000.000110.07048longerHepG2PPIG
MXESLC17A2ENSG00000112337.6chr6-2591480725914898259157262591587425912981259136792591596325916096-0.275000.001310.026032includedHepG2U2AF1
MXESLC17A2ENSG00000112337.6chr6-25914807259148982591572625915874259129812591367925915963259160960.242000.002490.047851includedHepG2SRSF1
MXESLC17A2ENSG00000112337.6chr6-2591480725914898259169122591707425912981259136792591719625917315-0.166000.001590.074232includedHepG2XPO5
MXESLC17A2ENSG00000112337.6chr6-25915963259160962591691225917074259148072591489825917196259173150.127000.000100.004281includedHepG2HNRNPK
MXESLC17A2ENSG00000112337.6chr6-2591480725914898259159632591609625912981259136792591691225917074-0.335000.000140.008222includedHepG2TIAL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SLC17A2 is not avaliable on ENCORE database.