SEPT9

General Information

Gene Name : SEPT9
Gene ID : ENSG00000184640.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SEPT9)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SEPT9	ENSG00000184640.17	88.81	141.54	115.17	ENCSR000AEF
HepG2	SEPT9	ENSG00000184640.17	428.92	259.30	344.11	ENCSR985KAT
K562	SEPT9	ENSG00000184640.17	82.15	76.20	79.18	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SEPT9 is not avaliable on ENCORE database.

Proteins bound to RNA

SEPT9 RNA is bound by 85 proteins.

CanvasJS.com

eCLIP assay for SEPT9 is not avaliable on ENCORE database.

85 proteins are bound to SEPT9 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	75496251	75496338	+	3'-UTR,intron-Distal,intron-Proximal	5.43739	400.00000	K562	UPF1
chr17	75494856	75494934	+	3'-UTR,intron-Proximal	5.80329	400.00000	HepG2	UPF1
chr17	75495730	75495804	+	3'-UTR,intron-Distal	6.55483	400.00000	K562	UPF1
chr17	75466160	75466238	+	intron-Distal	6.46877	400.00000	HepG2	AGGF1
chr17	75466561	75466622	+	intron-Distal	6.18496	400.00000	HepG2	AGGF1
chr17	75465886	75465984	+	intron-Distal	6.24542	400.00000	HepG2	AGGF1
chr17	75466238	75466314	+	intron-Distal	6.12505	400.00000	HepG2	AGGF1
chr17	75466728	75466848	+	intron-Distal,intron-Proximal	6.45799	400.00000	HepG2	XPO5
chr17	75466088	75466156	+	intron-Distal	5.59343	400.00000	HepG2	AGGF1
chr17	75466446	75466519	+	intron-Distal	4.98646	400.00000	HepG2	AGGF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 1,471 entries

eCLIP assay for SEPT9 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SEPT9 is not available on ENCORE database.
89 RBPs can affect the levels of SEPT9.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SEPT9 is not available on ENCORE database.

89 RBPs can affect the gene expression of SEPT9 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SEPT9	ENSG00000184640.13	4955.59920	10670.68470	-1.10650	37.59420	35.83280	HepG2	TAF15
SEPT9	ENSG00000184640.13	9696.74930	6044.90870	0.68170	29.29350	27.70060	HepG2	TRIM56
SEPT9	ENSG00000184640.13	8250.72370	5490.90690	0.58740	26.16800	24.46300	HepG2	SAFB2
SEPT9	ENSG00000184640.13	14345.32310	9380.78640	0.61270	25.60210	23.96910	HepG2	SRSF5
SEPT9	ENSG00000184640.13	9083.67660	6403.17320	0.50440	24.59930	22.98950	HepG2	SMN1
SEPT9	ENSG00000184640.13	12769.01850	9110.16240	0.48700	23.12990	21.49190	HepG2	SLBP
SEPT9	ENSG00000184640.13	8300.11600	5478.75770	0.59920	21.92770	20.24970	HepG2	DNAJC2
SEPT9	ENSG00000184640.13	6953.24270	9522.21900	-0.45360	17.83420	16.38910	HepG2	ZC3H8
SEPT9	ENSG00000184640.13	2247.36390	4066.02320	-0.85540	16.22200	14.96020	K562	AQR
SEPT9	ENSG00000184640.13	424.26460	1048.16530	-1.30480	16.45280	14.36880	K562	G3BP2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 97 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SEPT9 is not available on ENCORE database.

18 RBPs can affect the splicing of SEPT9 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	SEPT9	ENSG00000184640.13	chr17	+	75449971	75450078	75447325	75447610	75478225	75478417	-0.51400	0.00000	excluded	HepG2	RBM22
SE	SEPT9	ENSG00000184640.13	chr17	+	75303222	75303279	75277491	75277636	75398140	75398785	-0.12900	0.00004	excluded	HepG2	U2AF1
SE	SEPT9	ENSG00000184640.13	chr17	+	75492295	75492469	75489061	75489158	75493396	75493448	0.06700	0.00000	included	K562	XRCC6
SE	SEPT9	ENSG00000184640.13	chr17	+	75303222	75303279	75277491	75277636	75398140	75398785	-0.17800	0.00000	excluded	HepG2	HNRNPK
SE	SEPT9	ENSG00000184640.13	chr17	+	75303222	75303279	75277491	75277636	75398140	75398785	-0.10700	0.00001	excluded	HepG2	U2AF2
SE	SEPT9	ENSG00000184640.13	chr17	+	75450248	75450445	75449906	75450078	75478225	75478417	0.10800	0.00068	included	HepG2	AKAP1
SE	SEPT9	ENSG00000184640.13	chr17	+	75449971	75450078	75446648	75446868	75478225	75478417	-0.45800	0.00000	excluded	HepG2	MATR3
SE	SEPT9	ENSG00000184640.13	chr17	+	75303222	75303279	75277491	75277636	75398140	75398785	-0.13700	0.00003	excluded	HepG2	DDX6
SE	SEPT9	ENSG00000184640.13	chr17	+	75303222	75303279	75277491	75277636	75398140	75398785	-0.16500	0.00073	excluded	HepG2	PCBP2
SE	SEPT9	ENSG00000184640.13	chr17	+	75303222	75303279	75277491	75277636	75398140	75398785	-0.18600	0.00000	excluded	HepG2	SF3A3

Showing 1 to 10 of 22 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SEPT9

General Information

Functions

Localization

Domains (AlphaFold: SEPT9)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SEPT9 is not avaliable on ENCORE database.

85 proteins are bound to SEPT9 RNA:

eCLIP assay for SEPT9 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SEPT9 is not available on ENCORE database.

89 RBPs can affect the gene expression of SEPT9 :

The Knockdown/knockout RNA-Seq assay for SEPT9 is not available on ENCORE database.

18 RBPs can affect the splicing of SEPT9 :

The Knockdown/knockout RNA-Seq assay for SEPT9 is not avaliable on ENCORE database.