RPS17L

General Information

Gene Name       : RPS17L
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RPS17L)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RPS17L is not avaliable on ENCORE database.



Proteins bound to RNA
  • RPS17L RNA is bound by 3 proteins.  







eCLIP assay for RPS17L is not avaliable on ENCORE database.





3 proteins are bound to RPS17L RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr158320556783205634-3'-UTR,CDS,intron-Distal5.978405.71015K562PABPC4
chr158320553683205585-3'-UTR,CDS,intron-Distal,intron-Proximal5.4026111.78126K562YBX3
chr158320552983205633-3'-UTR,CDS,intron-Distal,intron-Proximal3.990545.38431K562LIN28B
chr158320711583207123-3'-UTR,CDS,intron-Distal,intron-Proximal4.386038.58756K562LIN28B
chr158320705683207097-3'-UTR,CDS,intron-Distal,intron-Proximal5.5693612.57080K562LIN28B
chr158320709783207115-3'-UTR,CDS,intron-Distal4.5849810.34406K562LIN28B
chr158320552383205567-3'-UTR,CDS,intron-Distal,intron-Proximal4.624496.79809K562PABPC4
chr158320708883207124-3'-UTR,CDS,intron-Distal,intron-Proximal7.4505827.62909K562PABPC4
chr158320763083207688-5'-UTR,CDS,intron-Distal,intron-Proximal4.172957.73347K562LIN28B
chr158320763083207643-5'-UTR,CDS,intron-Distal,intron-Proximal7.1418222.08990K562PABPC4
chr158320766283207734-5'-UTR,CDS,intron-Distal6.5462614.74338K562PABPC4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RPS17L is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RPS17L is not available on ENCORE database.

  • 127 RBPs can affect the levels of RPS17L.  








The Knockdown/knockout RNA-Seq assay for RPS17L is not available on ENCORE database.





127 RBPs can affect the gene expression of RPS17L :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RPS17LENSG00000182774.66101.074009334.85350-0.6136014.6598013.49420HepG2ACO1
RPS17LENSG00000182774.610399.372907435.367100.483903.574102.45730HepG2ADAR
RPS17LENSG00000182774.611770.1850027118.42510-1.2041020.1057018.80830HepG2AKAP1
RPS17LENSG00000182774.68431.3936011226.93760-0.413103.450802.29520HepG2AKAP8
RPS17LENSG00000182774.66255.059909378.53740-0.5843020.3744018.57210HepG2AKAP8L
RPS17LENSG00000182774.613000.3639022438.82420-0.787403.614702.71910HepG2ASCC1
RPS17LENSG00000182774.611645.5920014258.03010-0.292003.132802.40890HepG2AUH
RPS17LENSG00000182774.611572.785907457.061300.634006.846005.33320HepG2BCCIP
RPS17LENSG00000182774.67181.233405266.588000.447302.827102.22270HepG2BOP1
RPS17LENSG00000182774.67801.605409332.61570-0.258502.486101.84870HepG2CKAP4
RPS17LENSG00000182774.64279.9092010557.28040-1.3026016.8968015.07050HepG2CNOT7
RPS17LENSG00000182774.611465.132507625.303000.588305.598504.15280HepG2YBX3
RPS17LENSG00000182774.67528.939009755.16810-0.373704.487303.64580HepG2DDX21
RPS17LENSG00000182774.68464.298005553.600800.607906.985904.93530HepG2DDX28
RPS17LENSG00000182774.69893.8114025978.69690-1.3927024.5041022.83200HepG2DDX3X
RPS17LENSG00000182774.66999.820809411.66420-0.427105.207903.41810HepG2DDX52
RPS17LENSG00000182774.611132.4397022313.18350-1.003108.107107.10230HepG2DDX6
RPS17LENSG00000182774.66706.657608930.87120-0.4132011.003909.83780HepG2DKC1
RPS17LENSG00000182774.64836.7879011228.19480-1.2150032.8081030.35770HepG2EEF2
RPS17LENSG00000182774.65943.612009359.35240-0.6551010.135908.04630HepG2EFTUD2
RPS17LENSG00000182774.610116.1687021453.23630-1.0845018.5145017.07610HepG2EIF2S1
RPS17LENSG00000182774.612325.1253023709.81430-0.9439014.7648013.31110HepG2EIF4A3
RPS17LENSG00000182774.617208.7302023082.03270-0.423602.878002.17740HepG2EIF4B
RPS17LENSG00000182774.621106.4667015060.986300.486806.895205.63600HepG2EIF4G2
RPS17LENSG00000182774.69071.4601016371.44630-0.8518014.1532012.96360HepG2ETF1
RPS17LENSG00000182774.67832.827409121.63420-0.219802.043101.32700HepG2EWSR1
RPS17LENSG00000182774.612708.545408727.714900.542006.772104.16640HepG2EXOSC9
RPS17LENSG00000182774.66908.304508147.03270-0.237902.652601.51030HepG2FAM120A
RPS17LENSG00000182774.613251.680009296.413100.511304.943003.48200HepG2FASTKD2
RPS17LENSG00000182774.6854.563004843.58490-2.502805.578804.14150HepG2FTO
RPS17LENSG00000182774.612147.3041023917.77170-0.9774018.4643016.85660HepG2FXR1
RPS17LENSG00000182774.69287.5041022189.57450-1.2565024.0577022.18250HepG2G3BP1
RPS17LENSG00000182774.615412.9418023554.02800-0.611808.772407.17180HepG2G3BP2
RPS17LENSG00000182774.65164.939008114.80890-0.651806.031304.70560HepG2GEMIN5
RPS17LENSG00000182774.66724.8159010544.94560-0.649009.572607.64130HepG2GNB2L1
RPS17LENSG00000182774.67519.294508911.98600-0.245103.105202.07460HepG2HDGF
RPS17LENSG00000182774.66081.345708407.50130-0.467302.016301.41410HepG2HNRNPC
RPS17LENSG00000182774.66354.11320524.603303.5983010.044706.39010HepG2HNRNPUL1
RPS17LENSG00000182774.68641.2409010234.43680-0.244101.956201.33890HepG2IGF2BP1
RPS17LENSG00000182774.610970.3989022556.04790-1.0399015.9785014.51910HepG2IGF2BP2
RPS17LENSG00000182774.610667.3830021164.53310-0.988402.785401.80040HepG2IGF2BP3
RPS17LENSG00000182774.610957.137908531.068000.361002.263301.59170HepG2ILF2
RPS17LENSG00000182774.611418.3289014150.37360-0.309502.013201.31240HepG2LARP4
RPS17LENSG00000182774.67733.9132023926.10200-1.6293026.0196024.15950HepG2MAGOH
RPS17LENSG00000182774.69827.6169024060.73520-1.2918026.5489024.77150HepG2MATR3
RPS17LENSG00000182774.66809.1568024628.08710-1.8548041.2902039.06330HepG2NCBP2
RPS17LENSG00000182774.66164.77640570.895803.4326027.1963023.13460HepG2NUFIP2
RPS17LENSG00000182774.69841.9620021935.61330-1.1563018.9542017.10460HepG2PABPC4
RPS17LENSG00000182774.612084.8706020536.63860-0.765007.204206.29930HepG2PCBP1
RPS17LENSG00000182774.67588.2835011104.08590-0.549202.255701.31520HepG2PCBP2
RPS17LENSG00000182774.65341.527407537.30550-0.496804.287602.74510HepG2PKM
RPS17LENSG00000182774.610843.425008494.602200.352107.955206.72950HepG2PRPF4
RPS17LENSG00000182774.67179.8243020898.56580-1.5414022.1160020.85270HepG2PTBP1
RPS17LENSG00000182774.67921.8492015084.08000-0.9291010.367809.31340HepG2PUF60
RPS17LENSG00000182774.613757.1545016013.24850-0.219102.000101.47970HepG2PUM1
RPS17LENSG00000182774.69717.6075016001.03490-0.7195011.299809.99490HepG2PUM2
RPS17LENSG00000182774.64699.093209508.12320-1.0168070.8464068.63700HepG2PUS1
RPS17LENSG00000182774.69436.5183022629.89460-1.2619016.9962015.64030HepG2QKI
RPS17LENSG00000182774.68862.62140574.814103.9465032.9834028.62280HepG2RBM17
RPS17LENSG00000182774.67632.1741020539.50760-1.4282020.0039018.30290HepG2RBM25
RPS17LENSG00000182774.64235.33180503.338403.072809.997206.88990HepG2RBM39
RPS17LENSG00000182774.67691.2922010117.21580-0.395503.987702.71270HepG2RCC2
RPS17LENSG00000182774.66845.7690023256.62810-1.7644027.3774026.03800HepG2NELFE
RPS17LENSG00000182774.610543.1597021663.05320-1.038909.578208.53320HepG2RECQL
RPS17LENSG00000182774.64980.912908869.13110-0.8324021.3550019.89980HepG2RPS19
RPS17LENSG00000182774.65910.2874011490.10180-0.9591022.4844020.40750HepG2RPS2
RPS17LENSG00000182774.66653.4836010599.12910-0.671806.448305.23080HepG2RPS3A
RPS17LENSG00000182774.69284.5984011729.25500-0.337203.569702.34300HepG2RPS5
RPS17LENSG00000182774.612817.894707437.384700.785203.820803.08450HepG2SAFB2
RPS17LENSG00000182774.614874.667109980.980700.575505.424203.58670HepG2SART3
RPS17LENSG00000182774.66640.17790554.467203.5819017.2968013.77140HepG2SF1
RPS17LENSG00000182774.611645.5385021754.93390-0.9016011.4969010.41960HepG2SF3B4
RPS17LENSG00000182774.66757.34040496.947603.7652034.6900030.33580HepG2SNRNP200
RPS17LENSG00000182774.64116.120005759.18170-0.484601.958601.30460HepG2SNRNP70
RPS17LENSG00000182774.611581.2316015454.21200-0.416205.104504.48240HepG2SRFBP1
RPS17LENSG00000182774.611720.859806983.022000.747108.609606.04650HepG2SRP68
RPS17LENSG00000182774.67596.9083022708.73530-1.5798024.2564023.15830HepG2SRSF1
RPS17LENSG00000182774.610255.1594014894.32830-0.538402.861702.22530HepG2SRSF5
RPS17LENSG00000182774.613914.2921018475.88020-0.409103.293502.70190HepG2SRSF9
RPS17LENSG00000182774.67925.6565013417.06530-0.7595010.589709.71280HepG2SSB
RPS17LENSG00000182774.618686.9944012179.771200.617407.103205.18490HepG2SSRP1
RPS17LENSG00000182774.612720.0711016938.10150-0.413205.770704.93250HepG2SUCLG1
RPS17LENSG00000182774.619330.2834012329.444400.648706.377204.38620HepG2SUGP2
RPS17LENSG00000182774.615197.7083020415.08760-0.425803.343002.73550HepG2TAF15
RPS17LENSG00000182774.66424.227004891.809500.393103.575402.45980HepG2TFIP11
RPS17LENSG00000182774.611651.4860018754.87410-0.686804.289603.25760HepG2TIA1
RPS17LENSG00000182774.65143.355508113.31240-0.657603.805803.23960HepG2TIAL1
RPS17LENSG00000182774.611666.500108188.087900.510703.199502.60290HepG2TRIM56
RPS17LENSG00000182774.610170.3713014737.86530-0.535207.147105.63220HepG2TUFM
RPS17LENSG00000182774.65883.722509170.17220-0.640205.210604.36320HepG2U2AF1
RPS17LENSG00000182774.610535.6936015600.69130-0.566304.057003.03300HepG2UBE2L3
RPS17LENSG00000182774.68771.559804311.295901.0246010.343908.88070HepG2UCHL5
RPS17LENSG00000182774.66901.9577010071.30790-0.545203.515702.74300HepG2UPF1
RPS17LENSG00000182774.612311.047109723.475500.340306.151705.31730HepG2UTP3
RPS17LENSG00000182774.614104.504807184.698900.9731019.5539017.70350HepG2XRN2
RPS17LENSG00000182774.65222.362308383.25580-0.6828012.2023010.95870HepG2ZC3H8
RPS17LENSG00000182774.69563.1708011076.53240-0.211905.115104.42840HepG2ZNF622
RPS17LENSG00000182774.614092.6902016826.99380-0.255802.498301.38320K562AARS
RPS17LENSG00000182774.635349.7268024380.342900.535908.360307.44670K562AGGF1
RPS17LENSG00000182774.631934.1600026791.876000.253202.587201.64300K562AKAP8
RPS17LENSG00000182774.636426.9382025369.236800.521808.883807.63980K562AKAP8L
RPS17LENSG00000182774.631068.7873026619.163700.222902.709201.80570K562ATP5C1
RPS17LENSG00000182774.617931.6477020532.95870-0.195402.690901.40340K562BCCIP
RPS17LENSG00000182774.616496.7031019841.20150-0.266304.321303.10490K562BCLAF1
RPS17LENSG00000182774.617117.9127013388.629500.354404.732003.70490K562EIF3G
RPS17LENSG00000182774.618086.7103012804.022900.498207.137105.71710K562FIP1L1
RPS17LENSG00000182774.6523.891704908.03980-3.2278018.9180014.57350K562FXR2
RPS17LENSG00000182774.623076.6277016714.135800.465307.375704.92420K562G3BP1
RPS17LENSG00000182774.6209.0919011728.95170-5.80980152.29860147.94980K562G3BP2
RPS17LENSG00000182774.614960.1152018460.21440-0.303302.567201.47050K562GLRX3
RPS17LENSG00000182774.634798.7553026790.300800.377205.567104.49120K562GRSF1
RPS17LENSG00000182774.632128.1419011408.947601.493602.659501.47290K562HNRNPA2B1
RPS17LENSG00000182774.613436.3153018406.76190-0.454107.703906.75390K562HNRNPC
RPS17LENSG00000182774.617189.3160010531.598000.706702.429701.56070K562HNRNPM
RPS17LENSG00000182774.625770.0183017359.387500.569906.167304.99110K562HSPD1
RPS17LENSG00000182774.630648.3076025771.835300.249902.669101.61720K562MAK16
RPS17LENSG00000182774.645506.7090034123.817100.415204.698702.72130K562NOL12
RPS17LENSG00000182774.629593.785609962.757701.570603.243602.14740K562PABPN1
RPS17LENSG00000182774.618460.0186025808.89400-0.483505.229104.08360K562PCBP3
RPS17LENSG00000182774.622070.7854017972.526600.296203.027201.52650K562PHF6
RPS17LENSG00000182774.613464.2071019795.97310-0.556106.053304.87260K562POLR2G
RPS17LENSG00000182774.623161.5077014535.252000.672104.652903.55030K562PPIG
RPS17LENSG00000182774.620611.0257016504.245900.320503.551002.50800K562PSIP1
RPS17LENSG00000182774.647478.9095036208.780300.390803.487302.28080K562PUM1
RPS17LENSG00000182774.639220.0290025156.571300.6406011.5647010.50270K562PUS1
RPS17LENSG00000182774.629126.8351024513.568200.248702.659102.07610K562RBM15
RPS17LENSG00000182774.614439.2564011118.830400.376902.936201.55790K562RBM25
RPS17LENSG00000182774.614291.0157018010.22100-0.333703.055801.90090K562NELFE
RPS17LENSG00000182774.612203.1765017205.07940-0.495606.384104.78020K562RPS3
RPS17LENSG00000182774.622703.7083014303.413600.666505.476603.60890K562RRP9
RPS17LENSG00000182774.612433.6336017639.72180-0.504608.683006.82690K562SAFB
RPS17LENSG00000182774.627452.8741021279.049200.367408.081506.74750K562SF3A3
RPS17LENSG00000182774.615964.5005012190.240100.389002.413701.61780K562SF3B4
RPS17LENSG00000182774.630215.9369011081.578601.447002.546501.31820K562SFPQ
RPS17LENSG00000182774.616933.6115021800.90260-0.3645013.6329011.77040K562SRPK2
RPS17LENSG00000182774.620315.0388016529.463700.297402.713401.67680K562SRSF5
RPS17LENSG00000182774.620218.9002017240.525700.229803.159001.90340K562SRSF7
RPS17LENSG00000182774.620565.9490016799.533100.291702.698801.35870K562SSRP1
RPS17LENSG00000182774.616605.4719019856.33110-0.257903.233102.34570K562SYNCRIP
RPS17LENSG00000182774.64004.9674011737.26590-1.551208.724007.28450K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RPS17L is not available on ENCORE database.






No RBPs affect the alternative splcing events of RPS17L on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RPS17L is not avaliable on ENCORE database.