PSME1

General Information

Gene Name : PSME1
Gene ID : ENSG00000092010.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PSME1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PSME1	ENSG00000092010.14	223.32	291.29	257.31	ENCSR000AEF
HepG2	PSME1	ENSG00000092010.14	231.20	324.20	277.70	ENCSR985KAT
K562	PSME1	ENSG00000092010.14	53.45	45.37	49.41	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PSME1 is not avaliable on ENCORE database.

Proteins bound to RNA

PSME1 RNA is bound by 32 proteins.

CanvasJS.com

eCLIP assay for PSME1 is not avaliable on ENCORE database.

32 proteins are bound to PSME1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr14	24607308	24607367	+	3'-UTR,CDS,intron-Proximal	5.75394	54.62135	HepG2	PRPF8
chr14	24606911	24607004	+	3'-UTR,CDS	3.77811	43.66762	HepG2	BCLAF1
chr14	24608115	24608159	+	3'-UTR	4.28461	31.08180	HepG2	LARP4
chr14	24608089	24608114	+	3'-UTR	3.90214	26.73734	HepG2	LARP4
chr14	24607368	24607441	+	3'-UTR,CDS,intron-Proximal	3.58095	26.24210	HepG2	EFTUD2
chr14	24608062	24608089	+	3'-UTR	4.61790	26.18894	HepG2	LARP4
chr14	24606909	24607007	+	3'-UTR,CDS,intron-Proximal	3.84983	23.39514	HepG2	ZNF800
chr14	24606908	24606931	+	3'-UTR,CDS,intron-Proximal	5.24142	22.57742	HepG2	GRWD1
chr14	24607409	24607441	+	3'-UTR,CDS	4.08884	22.36410	HepG2	G3BP1
chr14	24607409	24607467	+	3'-UTR,CDS	3.92344	21.90299	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 146 entries

eCLIP assay for PSME1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PSME1 is not available on ENCORE database.
112 RBPs can affect the levels of PSME1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PSME1 is not available on ENCORE database.

112 RBPs can affect the gene expression of PSME1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PSME1	ENSG00000092010.10	3189.91770	6448.48150	-1.01540	54.04900	52.30790	HepG2	PTBP1
PSME1	ENSG00000092010.10	3346.41750	6337.32430	-0.92130	46.06400	44.15630	HepG2	PCBP1
PSME1	ENSG00000092010.10	3852.67580	6713.67110	-0.80120	36.25530	34.56320	HepG2	SF3B4
PSME1	ENSG00000092010.10	3787.00350	6102.61690	-0.68840	30.88330	29.68020	HepG2	SRFBP1
PSME1	ENSG00000092010.10	4015.56410	6983.82840	-0.79840	25.52680	23.90120	HepG2	QKI
PSME1	ENSG00000092010.10	1405.01620	710.97220	0.98260	23.02990	21.28130	K562	EIF2S2
PSME1	ENSG00000092010.10	3362.51640	5403.11060	-0.68420	20.70610	19.55770	HepG2	RBM22
PSME1	ENSG00000092010.10	1403.25830	774.42060	0.85750	20.24540	18.82770	K562	AGGF1
PSME1	ENSG00000092010.10	3874.98340	5701.09220	-0.55700	19.38250	18.16440	HepG2	SRSF9
PSME1	ENSG00000092010.10	3025.28590	5974.54950	-0.98180	19.50750	17.66920	HepG2	CIRBP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 133 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PSME1 is not available on ENCORE database.

13 RBPs can affect the splicing of PSME1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
RI	PSME1	ENSG00000092010.10	chr14	+	24607257	24607472	24607257	24607326	24607404	24607472	0.08800	0.00000	0.00001	included	HepG2	SF3A3
RI	PSME1	ENSG00000092010.10	chr14	+	24607257	24607472	24607257	24607326	24607404	24607472	0.05800	0.00000	0.00000	included	HepG2	PCBP1
RI	PSME1	ENSG00000092010.10	chr14	+	24607257	24607472	24607257	24607326	24607404	24607472	0.12400	0.00004	0.00076	included	K562	AKAP8L
RI	PSME1	ENSG00000092010.10	chr14	+	24607257	24607472	24607257	24607326	24607404	24607472	0.11600	0.00004	0.00076	included	K562	EFTUD2
RI	PSME1	ENSG00000092010.10	chr14	+	24607257	24607472	24607257	24607326	24607404	24607472	0.15900	0.00022	0.00185	included	K562	PUS1
RI	PSME1	ENSG00000092010.10	chr14	+	24606193	24606640	24606193	24606226	24606529	24606640	0.24200	0.00060	0.00894	included	HepG2	SF3A3
A3SS	PSME1	ENSG00000092010.10	chr14	+	24607257	24607472	24607404	24607472	24606908	24607006	-0.06300	0.00065	0.02839	shorter	HepG2	U2AF1
A5SS	PSME1	ENSG00000092010.10	chr14	+	24607682	24607777	24607682	24607769	24607944	24608176	0.07900	0.00101	0.07934	longer	K562	UTP18
A5SS	PSME1	ENSG00000092010.10	chr14	+	24607682	24607777	24607682	24607769	24607944	24608176	0.07100	0.00128	0.04724	longer	K562	PUS1
RI	PSME1	ENSG00000092010.10	chr14	+	24607257	24607472	24607257	24607326	24607404	24607472	0.07800	0.00135	0.01829	included	K562	PRPF8

Showing 1 to 10 of 17 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PSME1

General Information

Functions

Localization

Domains (AlphaFold: PSME1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PSME1 is not avaliable on ENCORE database.

32 proteins are bound to PSME1 RNA:

eCLIP assay for PSME1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PSME1 is not available on ENCORE database.

112 RBPs can affect the gene expression of PSME1 :

The Knockdown/knockout RNA-Seq assay for PSME1 is not available on ENCORE database.

13 RBPs can affect the splicing of PSME1 :

The Knockdown/knockout RNA-Seq assay for PSME1 is not avaliable on ENCORE database.