| RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
|---|
| Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
|---|---|---|---|---|---|---|---|---|
| chr1 | 36032268 | 36032340 | + | 3'-UTR,intron-Distal,intron-Proximal | 4.76606 | 43.52224 | K562 | AGGF1 |
| chr1 | 36032080 | 36032158 | + | 3'-UTR,intron-Distal | 5.07201 | 21.47409 | K562 | AGGF1 |
| chr1 | 36032256 | 36032341 | + | 3'-UTR,intron-Distal,intron-Proximal | 4.22680 | 20.16363 | K562 | HNRNPL |
| chr1 | 36031990 | 36032050 | + | 3'-UTR,intron-Distal | 4.92042 | 18.97375 | K562 | AGGF1 |
| chr1 | 36031985 | 36032071 | + | 3'-UTR,intron-Distal | 5.38035 | 12.57551 | K562 | HNRNPL |
| chr1 | 36031556 | 36031655 | + | 3'-UTR,intron-Distal | 5.50792 | 9.47550 | K562 | UPF1 |
| chr1 | 36032209 | 36032256 | + | 3'-UTR,intron-Distal | 3.09761 | 8.33309 | K562 | HNRNPL |
| chr1 | 36027166 | 36027244 | + | intron-Distal | 5.10334 | 7.43302 | K562 | AGGF1 |
| chr1 | 36029510 | 36029563 | + | intron-Proximal | 5.11607 | 6.83960 | K562 | AQR |
| chr1 | 36032279 | 36032333 | + | 3'-UTR,intron-Distal,intron-Proximal | 3.42893 | 6.64740 | HepG2 | HNRNPL |
| Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
| Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
|---|---|---|---|---|---|---|---|---|---|
| NCDN | ENSG00000020129.11 | 777.88420 | 254.43340 | 1.61220 | 47.10170 | 45.26610 | HepG2 | PUM1 | |
| NCDN | ENSG00000020129.11 | 788.74150 | 384.80060 | 1.03530 | 21.46230 | 20.04260 | HepG2 | PUS1 | |
| NCDN | ENSG00000020129.11 | 666.33690 | 229.26120 | 1.53920 | 21.43450 | 19.76240 | HepG2 | IGF2BP2 | |
| NCDN | ENSG00000020129.11 | 461.43110 | 184.06890 | 1.32580 | 20.99300 | 19.62300 | HepG2 | TRIM56 | |
| NCDN | ENSG00000020129.11 | 641.12870 | 269.13890 | 1.25220 | 19.71910 | 18.50960 | HepG2 | PTBP1 | |
| NCDN | ENSG00000020129.11 | 882.42540 | 275.76400 | 1.67790 | 17.13660 | 15.92740 | HepG2 | AKAP1 | |
| NCDN | ENSG00000020129.11 | 782.72280 | 264.08840 | 1.56740 | 16.93220 | 15.52480 | HepG2 | DDX3X | |
| NCDN | ENSG00000020129.11 | 509.48100 | 235.49300 | 1.11320 | 15.92450 | 14.63210 | HepG2 | CELF1 | |
| NCDN | ENSG00000020129.11 | 636.72850 | 264.45230 | 1.26760 | 14.93270 | 13.70460 | HepG2 | PCBP1 | |
| NCDN | ENSG00000020129.11 | 493.55120 | 236.65150 | 1.06030 | 14.63370 | 13.35620 | HepG2 | SRSF5 | |
| Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
| Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MXE | NCDN | ENSG00000020129.11 | chr1 | + | 36027992 | 36028234 | 36028802 | 36029027 | 36025926 | 36026895 | 36029367 | 36029510 | -0.22700 | 0.00162 | 0.06019 | 2included | HepG2 | BCCIP | |
| SE | NCDN | ENSG00000020129.11 | chr1 | + | 36027992 | 36028234 | 36025926 | 36026895 | 36028802 | 36029027 | -0.06900 | 0.00733 | 0.06352 | excluded | K562 | AQR |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".