MFGE8

General Information

Gene Name : MFGE8
Gene ID : ENSG00000140545.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MFGE8)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MFGE8	ENSG00000140545.14	0.27	0.65	0.46	ENCSR000AEF
HepG2	MFGE8	ENSG00000140545.14	19.72	9.37	14.54	ENCSR985KAT
K562	MFGE8	ENSG00000140545.14	78.57	62.97	70.77	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MFGE8 is not avaliable on ENCORE database.

Proteins bound to RNA

MFGE8 RNA is bound by 38 proteins.

CanvasJS.com

eCLIP assay for MFGE8 is not avaliable on ENCORE database.

38 proteins are bound to MFGE8 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	89444133	89444202	-	intron-Distal	8.08962	121.45850	K562	EIF4G2
chr15	89442142	89442340	-	3'-UTR,intron-Distal	3.89520	75.09684	K562	UPF1
chr15	89444439	89444551	-	intron-Distal	8.34708	70.35982	K562	EIF4G2
chr15	89444055	89444105	-	intron-Distal	6.73571	62.25897	K562	EIF4G2
chr15	89444673	89444717	-	intron-Distal,intron-Proximal	5.63857	56.97865	K562	EIF4G2
chr15	89444289	89444453	-	intron-Distal	5.49900	53.42599	K562	AATF
chr15	89444717	89444746	-	intron-Distal,intron-Proximal	6.28558	48.17156	K562	EIF4G2
chr15	89444202	89444266	-	intron-Distal	6.78023	47.70134	K562	EIF4G2
chr15	89444105	89444124	-	intron-Distal	7.00356	46.83420	K562	EIF4G2
chr15	89444335	89444419	-	intron-Distal	7.72818	43.04898	K562	EIF4G2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 138 entries

eCLIP assay for MFGE8 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MFGE8 is not available on ENCORE database.
142 RBPs can affect the levels of MFGE8.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MFGE8 is not available on ENCORE database.

142 RBPs can affect the gene expression of MFGE8 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MFGE8	ENSG00000140545.10	2028.89310	530.36210	1.93550	97.36550	94.79440	HepG2	CELF1
MFGE8	ENSG00000140545.10	73.54080	506.47850	-2.78390	63.18040	61.53840	HepG2	SSB
MFGE8	ENSG00000140545.10	1167.09970	373.14880	1.64500	54.97350	53.22440	HepG2	PTBP1
MFGE8	ENSG00000140545.10	2009.92230	419.42310	2.26060	52.46730	49.86280	HepG2	DDX55
MFGE8	ENSG00000140545.10	1463.13510	538.21420	1.44270	52.06150	49.76130	HepG2	AUH
MFGE8	ENSG00000140545.10	1015.00420	2797.63930	-1.46270	44.93020	42.61750	K562	DDX47
MFGE8	ENSG00000140545.10	1332.89800	361.06180	1.88410	36.44330	34.58660	HepG2	DDX6
MFGE8	ENSG00000140545.10	1286.94760	583.35900	1.14140	33.82400	32.58130	HepG2	SRFBP1
MFGE8	ENSG00000140545.10	1319.11300	532.97230	1.30730	34.31780	32.46600	HepG2	SRSF5
MFGE8	ENSG00000140545.10	1686.32370	518.60820	1.70110	33.41510	31.31590	HepG2	FIP1L1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 173 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MFGE8 is not available on ENCORE database.

12 RBPs can affect the splicing of MFGE8 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	MFGE8	ENSG00000140545.10	chr15	-	89442886	89443042	89442605	89442763	89444781	89444966	-0.33500	0.00000	0.00000	excluded	K562	SRSF1
SE	MFGE8	ENSG00000140545.10	chr15	-	89442886	89443042	89442528	89442763	89444781	89445191	-0.24500	0.00000	0.00000	excluded	K562	PCBP1
SE	MFGE8	ENSG00000140545.10	chr15	-	89442886	89443042	89442605	89442763	89444781	89444869	-0.25100	0.00000	0.00004	excluded	K562	EFTUD2
SE	MFGE8	ENSG00000140545.10	chr15	-	89442886	89443042	89442605	89442763	89444781	89444869	-0.16500	0.00000	0.00060	excluded	K562	UPF1
SE	MFGE8	ENSG00000140545.10	chr15	-	89442886	89443042	89442605	89442763	89444781	89444966	0.19700	0.00000	0.00000	included	K562	HNRNPU
A3SS	MFGE8	ENSG00000140545.10	chr15	-	89444781	89444995	89444781	89444966	89448987	89449152	0.09000	0.00002	0.00154	longer	HepG2	U2AF1
SE	MFGE8	ENSG00000140545.10	chr15	-	89443887	89443989	89442886	89443042	89444781	89444966	0.26500	0.00003	0.00089	included	K562	U2AF2
SE	MFGE8	ENSG00000140545.10	chr15	-	89442886	89443042	89442528	89442763	89444781	89445191	-0.15000	0.00003	0.00204	excluded	K562	TARDBP
A3SS	MFGE8	ENSG00000140545.10	chr15	-	89444781	89444995	89444781	89444966	89448987	89449152	0.09800	0.00018	0.01115	longer	K562	U2AF1
SE	MFGE8	ENSG00000140545.10	chr15	-	89442886	89443042	89442605	89442763	89444781	89444966	-0.14400	0.00050	0.04361	excluded	K562	SUPV3L1

Showing 1 to 10 of 19 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MFGE8

General Information

Functions

Localization

Domains (AlphaFold: MFGE8)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MFGE8 is not avaliable on ENCORE database.

38 proteins are bound to MFGE8 RNA:

eCLIP assay for MFGE8 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MFGE8 is not available on ENCORE database.

142 RBPs can affect the gene expression of MFGE8 :

The Knockdown/knockout RNA-Seq assay for MFGE8 is not available on ENCORE database.

12 RBPs can affect the splicing of MFGE8 :

The Knockdown/knockout RNA-Seq assay for MFGE8 is not avaliable on ENCORE database.