LY6E

General Information

Gene Name : LY6E
Gene ID : ENSG00000160932.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: LY6E)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	LY6E	ENSG00000160932.10	17.49	40.63	29.06	ENCSR000AEF
HepG2	LY6E	ENSG00000160932.10	74.10	26.67	50.38	ENCSR985KAT
K562	LY6E	ENSG00000160932.10	53.22	22.94	38.08	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for LY6E is not avaliable on ENCORE database.

Proteins bound to RNA

LY6E RNA is bound by 14 proteins.

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eCLIP assay for LY6E is not avaliable on ENCORE database.

14 proteins are bound to LY6E RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	144103270	144103408	+	3'-UTR,intron-Distal	6.15187	40.55798	HepG2	UPF1
chr8	144099923	144100004	+	5'-UTR,intron-Distal,intron-Proximal	4.78556	40.20066	HepG2	DDX3X
chr8	144102364	144102411	+	CDS,intron-Proximal	4.85608	30.91208	HepG2	DDX3X
chr8	144102326	144102349	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.63420	30.64822	K562	YBX3
chr8	144102317	144102326	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.94782	29.01591	K562	YBX3
chr8	144102349	144102354	+	3'-UTR,5'-UTR,CDS	4.23121	27.48385	K562	YBX3
chr8	144103275	144103396	+	3'-UTR,intron-Distal	5.03005	24.30622	HepG2	AKAP1
chr8	144102312	144102359	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.56360	23.74031	HepG2	DDX3X
chr8	144103153	144103252	+	3'-UTR,CDS,intron-Distal	6.40440	20.82980	HepG2	LARP4
chr8	144103509	144103606	+	3'-UTR,intron-Distal	5.99608	18.08639	HepG2	AKAP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 59 entries

eCLIP assay for LY6E is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for LY6E is not available on ENCORE database.
124 RBPs can affect the levels of LY6E.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for LY6E is not available on ENCORE database.

124 RBPs can affect the gene expression of LY6E :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
LY6E	ENSG00000160932.6	1716.78540	688.42120	1.31820	50.65940	48.28930	K562	AGGF1
LY6E	ENSG00000160932.6	212.03750	1148.15850	-2.43690	47.98720	46.49550	HepG2	SSB
LY6E	ENSG00000160932.6	253.92660	752.38090	-1.56710	35.34340	33.09250	HepG2	EIF4G1
LY6E	ENSG00000160932.6	296.35290	806.74150	-1.44480	33.79970	32.11800	HepG2	DKC1
LY6E	ENSG00000160932.6	928.88910	424.25560	1.13050	27.40930	25.86800	HepG2	TRIM56
LY6E	ENSG00000160932.6	1439.37830	692.18270	1.05610	22.44160	20.67990	K562	RBM15
LY6E	ENSG00000160932.6	554.26530	1400.99610	-1.33780	20.12780	18.75920	HepG2	ETF1
LY6E	ENSG00000160932.6	598.03680	1322.49570	-1.14500	17.85200	16.87250	HepG2	SRFBP1
LY6E	ENSG00000160932.6	1832.51620	710.31070	1.36720	17.65780	16.32590	K562	PUS1
LY6E	ENSG00000160932.6	298.48380	756.53380	-1.34180	17.41510	16.28190	HepG2	NELFE
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 155 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for LY6E is not available on ENCORE database.

5 RBPs can affect the splicing of LY6E :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	LY6E	ENSG00000160932.6	chr8	+	144102286	144102408	144102299	144102408	144099898	144100003	0.08500	0.00000	0.00005	longer	K562	AQR
SE	LY6E	ENSG00000160932.6	chr8	+	144101678	144101794	144099933	144100003	144102299	144102408	-0.11200	0.00002	0.03831	excluded	K562	TRA2A
SE	LY6E	ENSG00000160932.6	chr8	+	144101678	144101794	144099945	144100003	144102299	144102408	-0.11300	0.00006	0.00399	excluded	K562	TARDBP
SE	LY6E	ENSG00000160932.6	chr8	+	144101678	144101794	144099933	144100003	144102299	144102408	-0.09300	0.00263	0.04540	excluded	K562	SRSF1
A3SS	LY6E	ENSG00000160932.6	chr8	+	144102711	144102850	144102765	144102850	144102299	144102408	0.18400	0.00283	0.01753	longer	K562	AQR
SE	LY6E	ENSG00000160932.6	chr8	+	144101678	144101794	144099933	144100003	144102299	144102408	-0.08500	0.00316	0.09425	excluded	K562	PTBP1
A3SS	LY6E	ENSG00000160932.6	chr8	+	144102299	144102408	144102304	144102408	144101678	144101794	-0.46600	0.00783	0.04283	shorter	K562	AQR

Showing 1 to 7 of 7 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

LY6E

General Information

Functions

Localization

Domains (AlphaFold: LY6E)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for LY6E is not avaliable on ENCORE database.

14 proteins are bound to LY6E RNA:

eCLIP assay for LY6E is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for LY6E is not available on ENCORE database.

124 RBPs can affect the gene expression of LY6E :

The Knockdown/knockout RNA-Seq assay for LY6E is not available on ENCORE database.

5 RBPs can affect the splicing of LY6E :

The Knockdown/knockout RNA-Seq assay for LY6E is not avaliable on ENCORE database.