E2F3

General Information

Gene Name : E2F3
Gene ID : ENSG00000112242.14
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: E2F3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	E2F3	ENSG00000112242.14	12.50	11.09	11.79	ENCSR000AEF
HepG2	E2F3	ENSG00000112242.14	10.11	15.03	12.57	ENCSR985KAT
K562	E2F3	ENSG00000112242.14	29.80	27.97	28.88	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for E2F3 is not avaliable on ENCORE database.

Proteins bound to RNA

E2F3 RNA is bound by 43 proteins.

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eCLIP assay for E2F3 is not avaliable on ENCORE database.

43 proteins are bound to E2F3 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	20493791	20493889	+	3'-UTR	5.98787	36.53610	K562	PUM2
chr6	20493455	20493529	+	3'-UTR	5.04700	35.85577	K562	PUM2
chr6	20424615	20424729	+	intron-Distal	4.35530	27.04295	K562	TARDBP
chr6	20411611	20411721	+	intron-Distal	5.66143	24.68026	HepG2	PCBP2
chr6	20403260	20403340	+	intron-Distal	6.29722	22.32421	K562	NONO
chr6	20451550	20451637	+	intron-Distal	5.40855	20.06847	K562	EXOSC5
chr6	20492560	20492615	+	3'-UTR	4.51016	19.54206	K562	YBX3
chr6	20404592	20404638	+	intron-Distal	4.31356	18.15667	HepG2	PCBP2
chr6	20403236	20403350	+	intron-Distal	5.40716	18.12149	K562	GTF2F1
chr6	20493239	20493318	+	3'-UTR	4.18364	17.76792	K562	PUM2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 154 entries

eCLIP assay for E2F3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for E2F3 is not available on ENCORE database.
105 RBPs can affect the levels of E2F3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for E2F3 is not available on ENCORE database.

105 RBPs can affect the gene expression of E2F3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
E2F3	ENSG00000112242.10	359.65720	1055.02210	-1.55260	48.92790	47.42360	HepG2	SSB
E2F3	ENSG00000112242.10	1607.71290	452.13120	1.83010	30.00870	27.93830	HepG2	EIF4B
E2F3	ENSG00000112242.10	2009.07290	1215.09550	0.72540	21.23690	20.18990	HepG2	SRFBP1
E2F3	ENSG00000112242.10	887.50400	441.38980	1.00760	20.61340	19.20590	HepG2	PCBP1
E2F3	ENSG00000112242.10	849.28920	449.11620	0.91910	16.50200	15.38100	HepG2	PTBP1
E2F3	ENSG00000112242.10	2042.93290	1254.38750	0.70360	16.30310	14.94190	K562	FXR1
E2F3	ENSG00000112242.10	1060.73140	482.42280	1.13660	15.19170	13.78790	HepG2	NCBP2
E2F3	ENSG00000112242.10	283.34460	587.32670	-1.05160	14.46760	13.48230	HepG2	TIAL1
E2F3	ENSG00000112242.10	1714.56780	1075.80090	0.67230	13.19770	12.23370	HepG2	RBM22
E2F3	ENSG00000112242.10	1377.62610	2050.99670	-0.57410	13.53090	12.08650	K562	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 125 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for E2F3 is not available on ENCORE database.

4 RBPs can affect the splicing of E2F3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	E2F3	ENSG00000112242.10	chr6	+	20482963	20483180			20482992	20483180	20481436	20481656	0.22400	0.00000	0.00000	longer	K562	AQR
MXE	E2F3	ENSG00000112242.10	chr6	+	20481436	20481656	20482992	20483232	20480076	20480188	20488343	20488479	-0.15100	0.00010	0.00307	2included	K562	SF3B4
MXE	E2F3	ENSG00000112242.10	chr6	+	20482992	20483232	20488343	20488479	20481454	20481656	20490398	20493789	-0.18300	0.00023	0.02148	2included	K562	PHF6
SE	E2F3	ENSG00000112242.10	chr6	+	20468931	20469017			20404033	20404063	20480076	20480188	-0.13900	0.00069	0.08149	excluded	K562	LARP4
MXE	E2F3	ENSG00000112242.10	chr6	+	20481436	20481656	20482992	20483180	20480076	20480188	20488343	20488479	-0.11200	0.00252	0.03935	2included	K562	SF3B4

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

E2F3

General Information

Functions

Localization

Domains (AlphaFold: E2F3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for E2F3 is not avaliable on ENCORE database.

43 proteins are bound to E2F3 RNA:

eCLIP assay for E2F3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for E2F3 is not available on ENCORE database.

105 RBPs can affect the gene expression of E2F3 :

The Knockdown/knockout RNA-Seq assay for E2F3 is not available on ENCORE database.

4 RBPs can affect the splicing of E2F3 :

The Knockdown/knockout RNA-Seq assay for E2F3 is not avaliable on ENCORE database.