RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
---|
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
---|---|---|---|---|---|---|---|---|
chr5 | 176012720 | 176012845 | + | intron-Distal | 7.22726 | 41.41933 | HepG2 | RBFOX2 |
chr5 | 176012845 | 176012908 | + | intron-Distal,intron-Proximal | 6.65476 | 29.27266 | HepG2 | RBFOX2 |
chr5 | 175976334 | 175976416 | + | 5'-UTR,intron-Distal,intron-Proximal | 5.13712 | 13.15062 | HepG2 | DDX3X |
chr5 | 175992338 | 175992408 | + | 3'-UTR,5'-UTR,CDS,intron-Proximal | 6.28551 | 11.95715 | HepG2 | DDX3X |
chr5 | 176002188 | 176002263 | + | CDS,intron-Proximal | 3.26442 | 11.20046 | HepG2 | PRPF8 |
chr5 | 176002562 | 176002637 | + | CDS,intron-Proximal | 4.64444 | 10.76264 | HepG2 | PRPF8 |
chr5 | 176012012 | 176012063 | + | CDS,intron-Proximal | 4.19694 | 9.08333 | HepG2 | PRPF8 |
chr5 | 176017174 | 176017260 | + | CDS,intron-Proximal | 4.84931 | 8.79061 | HepG2 | EFTUD2 |
chr5 | 175992730 | 175992780 | + | CDS,intron-Proximal | 5.23026 | 8.72621 | HepG2 | PRPF8 |
chr5 | 176012845 | 176012919 | + | intron-Distal,intron-Proximal | 3.41315 | 8.70001 | HepG2 | PRPF8 |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
CDHR2 | ENSG00000074276.6 | 2631.18550 | 827.22320 | 1.66930 | 97.87560 | 95.00840 | HepG2 | SRSF5 | |
CDHR2 | ENSG00000074276.6 | 1830.45390 | 538.85530 | 1.76410 | 95.66340 | 92.95070 | HepG2 | SAFB2 | |
CDHR2 | ENSG00000074276.6 | 1665.28950 | 593.21930 | 1.48900 | 50.64550 | 48.63470 | HepG2 | TRIM56 | |
CDHR2 | ENSG00000074276.6 | 1691.14730 | 756.76100 | 1.16000 | 38.40600 | 36.65200 | HepG2 | DKC1 | |
CDHR2 | ENSG00000074276.6 | 2308.79390 | 662.17790 | 1.80170 | 37.00490 | 35.08530 | HepG2 | SUPV3L1 | |
CDHR2 | ENSG00000074276.6 | 3350.91520 | 837.73530 | 1.99990 | 36.70830 | 34.84520 | HepG2 | PUF60 | |
CDHR2 | ENSG00000074276.6 | 1962.55480 | 988.45610 | 0.98940 | 35.22080 | 33.67780 | HepG2 | SRSF9 | |
CDHR2 | ENSG00000074276.6 | 561.22620 | 1227.11090 | -1.12860 | 33.01040 | 31.77890 | HepG2 | SRFBP1 | |
CDHR2 | ENSG00000074276.6 | 460.53190 | 1086.45050 | -1.23820 | 28.47120 | 27.15730 | HepG2 | RBM22 | |
CDHR2 | ENSG00000074276.6 | 1364.16580 | 723.04130 | 0.91580 | 28.03600 | 25.29980 | HepG2 | KIF1C | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SE | CDHR2 | ENSG00000074276.6 | chr5 | + | 175993946 | 175994115 | 175992672 | 175992744 | 175995678 | 175995768 | 0.24300 | 0.00007 | 0.00280 | included | HepG2 | HNRNPK | |||
A5SS | CDHR2 | ENSG00000074276.6 | chr5 | + | 176016528 | 176016617 | 176016528 | 176016588 | 176017078 | 176017147 | -0.15900 | 0.00018 | 0.02465 | shorter | HepG2 | PCBP1 | |||
SE | CDHR2 | ENSG00000074276.6 | chr5 | + | 176005034 | 176005096 | 176004637 | 176004799 | 176005365 | 176005609 | -0.29900 | 0.00267 | 0.04598 | excluded | HepG2 | U2AF1 |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".