ARFRP1

General Information

Gene Name : ARFRP1
Gene ID : ENSG00000101246.19
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ARFRP1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ARFRP1	ENSG00000101246.19	3.31	7.96	5.63	ENCSR000AEF
HepG2	ARFRP1	ENSG00000101246.19	51.51	14.70	33.10	ENCSR985KAT
K562	ARFRP1	ENSG00000101246.19	26.21	13.44	19.82	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ARFRP1 is not avaliable on ENCORE database.

Proteins bound to RNA

ARFRP1 RNA is bound by 47 proteins.

CanvasJS.com

eCLIP assay for ARFRP1 is not avaliable on ENCORE database.

47 proteins are bound to ARFRP1 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr20	62333575	62333642	-	intron-Distal,intron-Proximal	5.62474	54.32248	HepG2	SF3A3
chr20	62330608	62330667	-	3'-UTR,intron-Distal	5.67014	49.14708	HepG2	CSTF2T
chr20	62330735	62330795	-	3'-UTR,intron-Distal,intron-Proximal	5.18973	45.30641	HepG2	CSTF2T
chr20	62331448	62331523	-	3'-UTR,intron-Distal	4.37841	38.00867	HepG2	CSTF2T
chr20	62330133	62330156	-	3'-UTR,intron-Distal	6.45297	34.46581	HepG2	CSTF2T
chr20	62331369	62331448	-	3'-UTR,intron-Distal,intron-Proximal	3.92549	33.27162	HepG2	CSTF2T
chr20	62338426	62338512	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.89217	32.68242	HepG2	EFTUD2
chr20	62331217	62331262	-	3'-UTR,intron-Distal	4.91494	32.01662	HepG2	CSTF2T
chr20	62330100	62330133	-	3'-UTR,intron-Distal	5.33225	31.46222	HepG2	CSTF2T
chr20	62330599	62330710	-	3'-UTR,intron-Distal,intron-Proximal	3.85370	31.29974	HepG2	FAM120A
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 271 entries

eCLIP assay for ARFRP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ARFRP1 is not available on ENCORE database.
98 RBPs can affect the levels of ARFRP1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ARFRP1 is not available on ENCORE database.

98 RBPs can affect the gene expression of ARFRP1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ARFRP1	ENSG00000101246.15	699.34840	332.40030	1.07300	20.45090	18.91310	HepG2	HNRNPU
ARFRP1	ENSG00000101246.15	814.39070	322.95620	1.33430	19.65250	18.54160	HepG2	TIAL1
ARFRP1	ENSG00000101246.15	813.66300	336.00510	1.27580	19.90560	18.52280	HepG2	BOP1
ARFRP1	ENSG00000101246.15	689.78270	345.19140	0.99860	18.93830	17.48730	HepG2	SMN1
ARFRP1	ENSG00000101246.15	1127.16510	658.53600	0.77530	18.53410	17.27500	HepG2	PUM1
ARFRP1	ENSG00000101246.15	1974.03650	1247.54000	0.66200	14.33090	13.13360	HepG2	ETF1
ARFRP1	ENSG00000101246.15	571.02470	296.47300	0.94560	13.21280	11.67360	HepG2	PPIL4
ARFRP1	ENSG00000101246.15	620.50860	300.81810	1.04450	12.51810	11.30530	HepG2	HNRNPA1
ARFRP1	ENSG00000101246.15	291.25020	598.38340	-1.03880	12.42870	11.23970	K562	HNRNPC
ARFRP1	ENSG00000101246.15	544.29000	296.01200	0.87860	12.35520	11.14200	HepG2	SAFB2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 109 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ARFRP1 is not available on ENCORE database.

14 RBPs can affect the splicing of ARFRP1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ARFRP1	ENSG00000101246.15	chr20	-	62333181	62333252	62329995	62332054	62333487	62333569	-0.28200	0.00000	0.00326	excluded	K562	SAFB
A3SS	ARFRP1	ENSG00000101246.15	chr20	-	62338002	62338161	62338002	62338090	62338350	62338444	0.12100	0.00000	0.00000	longer	K562	AQR
SE	ARFRP1	ENSG00000101246.15	chr20	-	62338350	62338444	62338002	62338090	62339218	62339348	-0.13200	0.00002	0.00761	excluded	K562	HNRNPA1
SE	ARFRP1	ENSG00000101246.15	chr20	-	62338350	62338444	62338002	62338090	62339218	62339348	-0.18100	0.00004	0.02497	excluded	K562	IGF2BP2
SE	ARFRP1	ENSG00000101246.15	chr20	-	62333181	62333252	62329995	62332054	62333487	62333569	-0.21100	0.00004	0.00118	excluded	K562	HNRNPC
A3SS	ARFRP1	ENSG00000101246.15	chr20	-	62331953	62332140	62331953	62332054	62333181	62333302	0.10600	0.00008	0.00068	longer	K562	AQR
SE	ARFRP1	ENSG00000101246.15	chr20	-	62333181	62333252	62331953	62332054	62333487	62333569	-0.28400	0.00009	0.02897	excluded	K562	SERBP1
SE	ARFRP1	ENSG00000101246.15	chr20	-	62338350	62338444	62338002	62338090	62339218	62339348	-0.16400	0.00010	0.00442	excluded	K562	AGGF1
SE	ARFRP1	ENSG00000101246.15	chr20	-	62338350	62338444	62338002	62338090	62339218	62339348	-0.21900	0.00011	0.00333	excluded	K562	SF3B4
SE	ARFRP1	ENSG00000101246.15	chr20	-	62338350	62338444	62338002	62338090	62339218	62339348	-0.21900	0.00067	0.01638	excluded	K562	U2AF1

Showing 1 to 10 of 17 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ARFRP1

General Information

Functions

Localization

Domains (AlphaFold: ARFRP1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ARFRP1 is not avaliable on ENCORE database.

47 proteins are bound to ARFRP1 RNA:

eCLIP assay for ARFRP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ARFRP1 is not available on ENCORE database.

98 RBPs can affect the gene expression of ARFRP1 :

The Knockdown/knockout RNA-Seq assay for ARFRP1 is not available on ENCORE database.

14 RBPs can affect the splicing of ARFRP1 :

The Knockdown/knockout RNA-Seq assay for ARFRP1 is not avaliable on ENCORE database.