ZNF30

General Information

Gene Name       : ZNF30
Gene ID             : ENSG00000168661.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF30)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF30ENSG00000168661.141.760.661.21ENCSR000AEF
HepG2ZNF30ENSG00000168661.142.793.673.23ENCSR985KAT
K562ZNF30ENSG00000168661.146.026.616.31ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF30 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on ZNF30 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ZNF30 is not avaliable on ENCORE database.






NO known proteins are bound to ZNF30 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ZNF30 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF30 is not available on ENCORE database.

  • 41 RBPs can affect the levels of ZNF30.  








The Knockdown/knockout RNA-Seq assay for ZNF30 is not available on ENCORE database.





41 RBPs can affect the gene expression of ZNF30 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF30ENSG00000168661.10121.4561054.030601.168504.534303.68940HepG2DDX21
ZNF30ENSG00000168661.10175.52390113.841100.624502.145501.58790HepG2DDX3X
ZNF30ENSG00000168661.1058.2908097.80250-0.746601.825201.31310HepG2DDX6
ZNF30ENSG00000168661.10102.0127061.979100.718802.061001.46300HepG2DKC1
ZNF30ENSG00000168661.10162.12830103.886300.642002.214501.64050HepG2EIF4A3
ZNF30ENSG00000168661.10116.7816065.950400.824302.389401.34610HepG2FUS
ZNF30ENSG00000168661.10161.3143083.163300.955803.722902.75890HepG2LARP4
ZNF30ENSG00000168661.10122.0517065.658100.894302.730101.51860HepG2PRPF6
ZNF30ENSG00000168661.1045.9245086.25640-0.909401.940001.36710HepG2RBM25
ZNF30ENSG00000168661.1026.3497080.09620-1.603903.051101.61210HepG2SF1
ZNF30ENSG00000168661.10173.4075086.596301.001704.672703.78260HepG2SF3A3
ZNF30ENSG00000168661.10163.0641085.681700.928304.305503.62980HepG2TAF15
ZNF30ENSG00000168661.10133.3005078.766700.758902.748401.91470HepG2TIA1
ZNF30ENSG00000168661.10110.3308059.936200.880202.725602.10110HepG2U2AF1
ZNF30ENSG00000168661.1081.7106038.615601.081202.210801.53210HepG2UCHL5
ZNF30ENSG00000168661.10122.4552074.145100.723702.367001.80370HepG2UTP3
ZNF30ENSG00000168661.10131.3591084.462700.637002.404301.88370HepG2ZNF622
ZNF30ENSG00000168661.10122.26740258.31020-1.079108.324107.41220K562AGGF1
ZNF30ENSG00000168661.10157.15130268.77430-0.774203.084702.39410K562AKAP8L
ZNF30ENSG00000168661.10411.98820289.987900.506503.856903.10590K562DDX47
ZNF30ENSG00000168661.10187.58840303.60850-0.694604.903803.98400K562EIF2S2
ZNF30ENSG00000168661.10130.65580226.85810-0.796003.806202.57340K562EIF3D
ZNF30ENSG00000168661.10265.40440140.339000.919206.241905.01860K562EIF4A3
ZNF30ENSG00000168661.10280.28990145.946400.941407.223606.30870K562FXR1
ZNF30ENSG00000168661.10299.49770160.060600.903805.345204.28910K562G3BP2
ZNF30ENSG00000168661.10134.68600255.85010-0.925703.271301.91140K562HNRNPA2B1
ZNF30ENSG00000168661.10188.35030275.78980-0.550203.143302.19430K562HNRNPU
ZNF30ENSG00000168661.10148.57600223.88040-0.591502.362001.43480K562IGF2BP2
ZNF30ENSG00000168661.10184.86770285.26910-0.625802.684101.87290K562KIF1C
ZNF30ENSG00000168661.10339.83170235.390600.529703.242402.32530K562MAGOH
ZNF30ENSG00000168661.1097.66740223.90580-1.196904.438503.10570K562PABPN1
ZNF30ENSG00000168661.10143.50050266.30660-0.892002.984301.45510K562PPP1R8
ZNF30ENSG00000168661.10681.96070482.806400.498103.321802.42910K562PUF60
ZNF30ENSG00000168661.10650.92300513.556700.341902.271901.31440K562PUM1
ZNF30ENSG00000168661.1097.95740266.61650-1.4445011.3508010.29930K562PUS1
ZNF30ENSG00000168661.10138.44770259.72280-0.907606.302105.43230K562RBM15
ZNF30ENSG00000168661.1079.40670138.20910-0.799502.763601.77490K562RCC2
ZNF30ENSG00000168661.10184.78790122.916300.588102.283601.30710K562SAFB
ZNF30ENSG00000168661.1064.79910204.83050-1.660405.776003.82930K562SF1
ZNF30ENSG00000168661.10155.06220281.32820-0.859402.710401.30630K562SUPT6H
ZNF30ENSG00000168661.10255.58210138.365800.885205.889704.68290K562SYNCRIP
ZNF30ENSG00000168661.1085.44620154.79780-0.857303.344502.28530K562TRIM56
ZNF30ENSG00000168661.10331.41060230.377500.524503.604702.64770K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF30 is not available on ENCORE database.





2 RBPs can affect the splicing of ZNF30 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNF30ENSG00000168661.10chr19+3543349735433577354245313542462735434126354360690.779000.002960.09389includedHepG2MATR3
SEZNF30ENSG00000168661.10chr19+3543349735433577354245313542462735434126354360690.767000.001590.08969includedHepG2IGF2BP3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNF30 is not avaliable on ENCORE database.