ZNF16

General Information

Gene Name       : ZNF16
Gene ID             : ENSG00000170631.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF16)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF16ENSG00000170631.144.633.784.21ENCSR000AEF
HepG2ZNF16ENSG00000170631.144.454.984.71ENCSR985KAT
K562ZNF16ENSG00000170631.144.353.724.04ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
ZNF16Ribo-STAMP-293TshRNAZNF16-BGRSLV06-51,ZNF16-BGRSLV06-52NT-BGRSLV06-1,NT-BGRSLV06-2,SubmittedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF16 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on ZNF16 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ZNF16 is not avaliable on ENCORE database.






NO known proteins are bound to ZNF16 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ZNF16 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF16 is not available on ENCORE database.

  • 39 RBPs can affect the levels of ZNF16.  








The Knockdown/knockout RNA-Seq assay for ZNF16 is not available on ENCORE database.





39 RBPs can affect the gene expression of ZNF16 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF16ENSG00000170631.10159.80270336.35890-1.073706.871706.07480HepG2AKAP1
ZNF16ENSG00000170631.10216.80820143.677200.593503.173902.47150HepG2CKAP4
ZNF16ENSG00000170631.10185.43110132.919600.480202.207001.45660HepG2DDX19B
ZNF16ENSG00000170631.10175.64460110.861300.663802.652101.75940HepG2DDX24
ZNF16ENSG00000170631.10199.11910322.22680-0.694403.742303.02530HepG2DDX3X
ZNF16ENSG00000170631.1099.49270276.75130-1.4759010.614609.49200HepG2DDX6
ZNF16ENSG00000170631.10202.45550137.504900.558002.447301.80390HepG2DKC1
ZNF16ENSG00000170631.10151.19930266.09550-0.815504.272103.54410HepG2EIF2S1
ZNF16ENSG00000170631.10186.14730294.09000-0.659803.191502.50540HepG2EIF4A3
ZNF16ENSG00000170631.10204.80850296.65450-0.534502.412501.76470HepG2FXR1
ZNF16ENSG00000170631.10191.03210275.22740-0.526802.251501.64770HepG2G3BP1
ZNF16ENSG00000170631.10113.0310069.390600.703801.867101.34020HepG2HNRNPLL
ZNF16ENSG00000170631.10155.47920279.77570-0.847504.803803.93570HepG2IGF2BP2
ZNF16ENSG00000170631.10142.61620262.50470-0.880202.260301.37860HepG2IGF2BP3
ZNF16ENSG00000170631.10124.14530298.43010-1.265408.681607.61460HepG2MATR3
ZNF16ENSG00000170631.10197.73920305.46900-0.627403.046202.38320HepG2NCBP2
ZNF16ENSG00000170631.10151.46040272.08260-0.845104.764503.82890HepG2PABPC4
ZNF16ENSG00000170631.10206.33770304.01030-0.559103.533402.86590HepG2PCBP1
ZNF16ENSG00000170631.10198.53250309.34060-0.639804.593003.92760HepG2PTBP1
ZNF16ENSG00000170631.10198.40600146.395000.438501.866801.33970HepG2PUS1
ZNF16ENSG00000170631.10174.81390335.02600-0.938507.671006.71010HepG2QKI
ZNF16ENSG00000170631.10170.56040304.05670-0.834105.769304.82830HepG2RBM25
ZNF16ENSG00000170631.10187.06450344.26740-0.880006.566405.79270HepG2NELFE
ZNF16ENSG00000170631.10204.15140320.63660-0.651304.417603.66220HepG2RECQL
ZNF16ENSG00000170631.10208.56790322.06560-0.626804.150003.44920HepG2SF3B4
ZNF16ENSG00000170631.10367.14900260.045500.497503.387402.85060HepG2SRFBP1
ZNF16ENSG00000170631.10156.48820336.16590-1.1031010.415009.62800HepG2SRSF1
ZNF16ENSG00000170631.10117.57820273.48820-1.2179011.5430010.55330HepG2SRSF9
ZNF16ENSG00000170631.10202.67250302.15670-0.576103.513402.89540HepG2TAF15
ZNF16ENSG00000170631.10190.99260277.64330-0.539702.941202.08120HepG2TIA1
ZNF16ENSG00000170631.1087.72260152.59880-0.798703.835403.21990HepG2ZNF622
ZNF16ENSG00000170631.101227.84530202.991002.5965073.9020071.24460K562AQR
ZNF16ENSG00000170631.10219.21980143.457300.611703.240802.54400K562DDX47
ZNF16ENSG00000170631.10149.7807094.326600.667002.300501.46720K562EFTUD2
ZNF16ENSG00000170631.10249.11610122.975901.018307.084805.77840K562EIF4A3
ZNF16ENSG00000170631.10260.7044091.791001.5059010.855209.35660K562PRPF8
ZNF16ENSG00000170631.10167.4605093.490700.840803.137402.26490K562RPS19
ZNF16ENSG00000170631.10186.88450117.727200.666603.058002.20190K562SF3A3
ZNF16ENSG00000170631.10174.21270115.165900.597002.456101.69910K562U2AF2
ZNF16ENSG00000170631.10164.70610112.568600.549002.224201.45840K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF16 is not available on ENCORE database.






No RBPs affect the alternative splcing events of ZNF16 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ZNF16 is not avaliable on ENCORE database.