RP11-96C23.5

General Information

Gene Name : RP11-96C23.5
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-96C23.5)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-96C23.5 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-96C23.5 RNA is bound by 2 proteins.

eCLIP assay for RP11-96C23.5 is not avaliable on ENCORE database.

2 proteins are bound to RP11-96C23.5 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	88742961	88743096	+	intron-Distal,intron-Proximal	4.28441	3.83824	K562	BUD13
chr10	88743602	88743689	+	3'-UTR,intron-Proximal	4.52731	6.77156	K562	AQR
chr10	88743000	88743083	+	intron-Distal,intron-Proximal	4.39579	6.48405	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-96C23.5 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for RP11-96C23.5 is not available on ENCORE database.
36 RBPs can affect the levels of RP11-96C23.5.

The Knockdown/knockout RNA-Seq assay for RP11-96C23.5 is not available on ENCORE database.

36 RBPs can affect the gene expression of RP11-96C23.5 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-96C23.5	ENSG00000271880.1	97.81830	223.58790	-1.19270	8.32400	7.41220	K562	AGGF1
RP11-96C23.5	ENSG00000271880.1	160.22120	245.67880	-0.61670	3.16120	2.09550	K562	AKAP8
RP11-96C23.5	ENSG00000271880.1	94.91810	232.65070	-1.29340	5.29300	4.37460	K562	AKAP8L
RP11-96C23.5	ENSG00000271880.1	145.51870	244.10180	-0.74630	4.63870	3.42050	K562	ATP5C1
RP11-96C23.5	ENSG00000271880.1	150.12100	93.00480	0.69060	2.30240	1.51350	K562	BOP1
RP11-96C23.5	ENSG00000271880.1	160.09200	267.20810	-0.73910	4.76230	3.18350	K562	CCDC124
RP11-96C23.5	ENSG00000271880.1	131.06060	72.51720	0.85370	3.45240	1.74280	K562	CEBPZ
RP11-96C23.5	ENSG00000271880.1	169.64670	98.87800	0.77870	3.04020	2.21960	K562	CPSF6
RP11-96C23.5	ENSG00000271880.1	163.01360	262.32960	-0.68640	3.84900	2.11080	K562	DDX19B
RP11-96C23.5	ENSG00000271880.1	128.55540	250.36500	-0.96160	6.96710	5.46880	K562	DKC1
RP11-96C23.5	ENSG00000271880.1	87.64820	44.16970	0.98860	2.97300	2.12350	K562	EIF4A3
RP11-96C23.5	ENSG00000271880.1	110.93460	52.46130	1.08030	4.22430	2.61750	K562	EXOSC5
RP11-96C23.5	ENSG00000271880.1	207.33460	100.63080	1.04280	5.62620	4.39930	K562	FMR1
RP11-96C23.5	ENSG00000271880.1	118.88670	48.31440	1.29900	4.29560	2.49300	K562	GEMIN5
RP11-96C23.5	ENSG00000271880.1	154.08430	94.39390	0.70690	2.56370	1.79780	K562	GPKOW
RP11-96C23.5	ENSG00000271880.1	132.25600	48.93240	1.43440	7.66810	5.96120	K562	HNRNPA1
RP11-96C23.5	ENSG00000271880.1	199.25440	112.02100	0.83070	3.05280	2.21850	K562	HSPD1
RP11-96C23.5	ENSG00000271880.1	115.26310	246.90960	-1.09910	6.62650	5.22180	K562	KIF1C
RP11-96C23.5	ENSG00000271880.1	171.55480	80.62750	1.08920	4.44160	3.22770	K562	KRR1
RP11-96C23.5	ENSG00000271880.1	149.92700	236.34590	-0.65660	3.28240	2.08370	K562	MAK16
RP11-96C23.5	ENSG00000271880.1	185.20140	276.59980	-0.57870	3.13860	2.15970	K562	MBNL1
RP11-96C23.5	ENSG00000271880.1	121.57000	53.70440	1.17860	5.03920	3.97400	K562	MTPAP
RP11-96C23.5	ENSG00000271880.1	99.38000	193.87570	-0.96410	3.93690	2.83260	K562	NAA15
RP11-96C23.5	ENSG00000271880.1	100.35330	59.69020	0.74940	2.16470	1.49660	K562	NSUN2
RP11-96C23.5	ENSG00000271880.1	28.22670	59.57250	-1.07760	2.32370	1.43140	K562	PCBP2
RP11-96C23.5	ENSG00000271880.1	282.63440	180.46000	0.64720	3.60730	2.37970	K562	PUM1
RP11-96C23.5	ENSG00000271880.1	312.24630	176.82420	0.82030	5.90410	4.48620	K562	PUM2
RP11-96C23.5	ENSG00000271880.1	127.42130	230.74410	-0.85670	4.12300	3.47970	K562	PUS1
RP11-96C23.5	ENSG00000271880.1	76.10920	224.81010	-1.56260	12.36040	11.11070	K562	RBM15
RP11-96C23.5	ENSG00000271880.1	118.00130	58.86960	1.00310	3.92440	2.96160	K562	SF3A3
RP11-96C23.5	ENSG00000271880.1	76.07760	163.27550	-1.10180	3.54820	2.00430	K562	SFPQ
RP11-96C23.5	ENSG00000271880.1	74.67400	153.76430	-1.04200	2.93120	1.65480	K562	SNRNP200
RP11-96C23.5	ENSG00000271880.1	26.21940	63.73990	-1.28160	2.86920	2.15180	K562	SRSF1
RP11-96C23.5	ENSG00000271880.1	183.71660	63.28930	1.53730	10.78860	9.48540	K562	UPF1
RP11-96C23.5	ENSG00000271880.1	95.07830	233.93180	-1.29890	6.18930	4.07300	K562	UTP18
RP11-96C23.5	ENSG00000271880.1	107.42620	48.94260	1.13410	3.71450	2.24000	K562	XRN2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-96C23.5

General Information

Functions

Localization

Domains (AlphaFold: RP11-96C23.5)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-96C23.5 is not avaliable on ENCORE database.

2 proteins are bound to RP11-96C23.5 RNA:

eCLIP assay for RP11-96C23.5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-96C23.5 is not available on ENCORE database.

36 RBPs can affect the gene expression of RP11-96C23.5 :

The Knockdown/knockout RNA-Seq assay for RP11-96C23.5 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP11-96C23.5 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-96C23.5 is not avaliable on ENCORE database.