RP11-96C23.5

General Information

Gene Name : RP11-96C23.5
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-96C23.5)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-96C23.5 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-96C23.5 RNA is bound by 2 proteins.

CanvasJS.com

eCLIP assay for RP11-96C23.5 is not avaliable on ENCORE database.

2 proteins are bound to RP11-96C23.5 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	88743602	88743689	+	3'-UTR,intron-Proximal	4.52731	6.77156	K562	AQR
chr10	88743000	88743083	+	intron-Distal,intron-Proximal	4.39579	6.48405	K562	AQR
chr10	88742961	88743096	+	intron-Distal,intron-Proximal	4.28441	3.83824	K562	BUD13
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 3 of 3 entries

eCLIP assay for RP11-96C23.5 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for RP11-96C23.5 is not available on ENCORE database.
36 RBPs can affect the levels of RP11-96C23.5.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RP11-96C23.5 is not available on ENCORE database.

36 RBPs can affect the gene expression of RP11-96C23.5 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-96C23.5	ENSG00000271880.1	76.10920	224.81010	-1.56260	12.36040	11.11070	K562	RBM15
RP11-96C23.5	ENSG00000271880.1	183.71660	63.28930	1.53730	10.78860	9.48540	K562	UPF1
RP11-96C23.5	ENSG00000271880.1	97.81830	223.58790	-1.19270	8.32400	7.41220	K562	AGGF1
RP11-96C23.5	ENSG00000271880.1	132.25600	48.93240	1.43440	7.66810	5.96120	K562	HNRNPA1
RP11-96C23.5	ENSG00000271880.1	128.55540	250.36500	-0.96160	6.96710	5.46880	K562	DKC1
RP11-96C23.5	ENSG00000271880.1	115.26310	246.90960	-1.09910	6.62650	5.22180	K562	KIF1C
RP11-96C23.5	ENSG00000271880.1	312.24630	176.82420	0.82030	5.90410	4.48620	K562	PUM2
RP11-96C23.5	ENSG00000271880.1	207.33460	100.63080	1.04280	5.62620	4.39930	K562	FMR1
RP11-96C23.5	ENSG00000271880.1	94.91810	232.65070	-1.29340	5.29300	4.37460	K562	AKAP8L
RP11-96C23.5	ENSG00000271880.1	95.07830	233.93180	-1.29890	6.18930	4.07300	K562	UTP18
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 36 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-96C23.5

General Information

Functions

Localization

Domains (AlphaFold: RP11-96C23.5)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-96C23.5 is not avaliable on ENCORE database.

2 proteins are bound to RP11-96C23.5 RNA:

eCLIP assay for RP11-96C23.5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-96C23.5 is not available on ENCORE database.

36 RBPs can affect the gene expression of RP11-96C23.5 :

The Knockdown/knockout RNA-Seq assay for RP11-96C23.5 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP11-96C23.5 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-96C23.5 is not avaliable on ENCORE database.