RP11-85K15.2

General Information

Gene Name : RP11-85K15.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-85K15.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-85K15.2 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-85K15.2 RNA is bound by 20 proteins.

eCLIP assay for RP11-85K15.2 is not avaliable on ENCORE database.

20 proteins are bound to RP11-85K15.2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr14	35438478	35438533	-	intron-Distal,intron-Proximal	3.14986	8.27081	HepG2	AQR
chr14	35438389	35438447	-	intron-Distal	3.59764	7.89598	HepG2	GRWD1
chr14	35438984	35439058	-	intron-Distal	4.10314	6.41317	HepG2	QKI
chr14	35451638	35451726	-	intron-Distal,intron-Proximal	3.86565	11.79607	HepG2	NCBP2
chr14	35428802	35428871	-	intron-Distal	4.70702	13.77500	HepG2	QKI
chr14	35451523	35451663	-	intron-Distal,intron-Proximal	3.31411	8.20720	HepG2	EFTUD2
chr14	35402719	35402749	-	intron-Distal	3.49321	4.63751	K562	IGF2BP1
chr14	35415951	35416098	-	intron-Distal	3.99477	7.08005	HepG2	QKI
chr14	35433147	35433193	-	intron-Distal	3.35688	6.59473	HepG2	GRWD1
chr14	35402719	35402749	-	intron-Distal	4.72279	13.09062	HepG2	TROVE2
chr14	35429141	35429166	-	intron-Distal	3.77002	3.16028	HepG2	SUGP2
chr14	35408873	35408924	-	intron-Distal	3.13246	6.59727	HepG2	SUGP2
chr14	35402732	35402743	-	intron-Distal	7.75199	54.45191	K562	TROVE2
chr14	35438473	35438529	-	intron-Distal,intron-Proximal	4.45400	15.05553	HepG2	U2AF2
chr14	35451159	35451256	-	intron-Distal	5.32019	10.04692	HepG2	HNRNPM
chr14	35433057	35433136	-	intron-Distal,intron-Proximal,polyA_site	4.39678	10.13353	HepG2	KHSRP
chr14	35411551	35411651	-	intron-Distal	3.53450	9.70038	HepG2	SUGP2
chr14	35402715	35402732	-	intron-Distal	7.75199	54.45191	K562	TROVE2
chr14	35438469	35438530	-	intron-Distal,intron-Proximal	3.02000	6.92610	HepG2	BUD13
chr14	35429210	35429296	-	intron-Distal	3.33972	5.72064	HepG2	MATR3
chr14	35426165	35426203	-	intron-Distal	3.35888	3.42293	HepG2	HNRNPC
chr14	35443562	35443630	-	intron-Distal	4.17720	8.99324	HepG2	CSTF2
chr14	35417955	35418015	-	intron-Distal	3.30254	6.34217	HepG2	HNRNPC
chr14	35424213	35424308	-	intron-Distal,intron-Proximal	3.29001	8.54136	HepG2	KHSRP
chr14	35433171	35433242	-	intron-Distal	3.13086	8.60088	HepG2	BCLAF1
chr14	35407190	35407233	-	intron-Distal	3.74415	3.00349	HepG2	ILF3
chr14	35428787	35428889	-	intron-Distal	4.86173	7.30165	K562	QKI
chr14	35409289	35409348	-	intron-Distal	4.86089	6.84124	HepG2	SUGP2
chr14	35404378	35404437	-	intron-Distal	4.64502	4.51735	HepG2	QKI
chr14	35424124	35424180	-	intron-Distal,intron-Proximal	3.88011	13.64056	HepG2	U2AF2
chr14	35438343	35438409	-	intron-Distal,intron-Proximal	5.56647	25.56347	HepG2	PRPF8
chr14	35428837	35428910	-	intron-Distal	3.10009	5.10681	HepG2	SUGP2
chr14	35409551	35409591	-	intron-Distal	3.32570	4.33009	HepG2	SUGP2
chr14	35428758	35428802	-	intron-Distal	4.45336	6.41317	HepG2	QKI
chr14	35438471	35438516	-	intron-Distal,intron-Proximal	3.61674	7.64107	HepG2	PPIG
chr14	35442591	35442644	-	intron-Distal	3.87212	7.38558	HepG2	HNRNPC
chr14	35423116	35423135	-	intron-Distal	4.11556	3.24590	HepG2	ILF3
chr14	35447049	35447063	-	intron-Distal	4.59777	6.49695	HepG2	HNRNPC
chr14	35402743	35402750	-	intron-Distal	7.73870	53.55909	K562	TROVE2
chr14	35437496	35437593	-	intron-Distal	3.76962	3.24590	HepG2	ILF3
chr14	35433190	35433236	-	intron-Distal	3.29704	5.58370	HepG2	PPIG
chr14	35433071	35433126	-	intron-Distal,intron-Proximal,polyA_site	5.48028	12.75230	HepG2	TIAL1
chr14	35408951	35409009	-	intron-Distal	3.04885	4.01959	HepG2	SUGP2
chr14	35446994	35447049	-	intron-Distal	4.25873	10.61900	HepG2	HNRNPC
chr14	35419636	35419742	-	intron-Distal	4.31420	22.72639	HepG2	CSTF2
chr14	35451581	35451633	-	intron-Distal	3.44347	5.10493	HepG2	AQR
chr14	35423426	35423435	-	intron-Distal	3.00769	4.27525	HepG2	ILF3
chr14	35423135	35423209	-	intron-Distal	3.50148	20.14626	HepG2	ILF3
chr14	35438462	35438515	-	intron-Distal,intron-Proximal	3.79104	10.05825	HepG2	GRWD1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-85K15.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-85K15.2 is not available on ENCORE database.
14 RBPs can affect the levels of RP11-85K15.2.

The Knockdown/knockout RNA-Seq assay for RP11-85K15.2 is not available on ENCORE database.

14 RBPs can affect the gene expression of RP11-85K15.2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-85K15.2	ENSG00000258704.1	27.76390	55.52820	-1.00000	2.25740	1.69770	HepG2	ACO1
RP11-85K15.2	ENSG00000258704.1	32.37960	74.79950	-1.20790	2.79510	2.26080	HepG2	AKAP1
RP11-85K15.2	ENSG00000258704.1	21.36550	52.61540	-1.30020	2.24850	1.54430	HepG2	DDX55
RP11-85K15.2	ENSG00000258704.1	132.13350	76.08220	0.79630	2.24430	1.50560	HepG2	EIF4G2
RP11-85K15.2	ENSG00000258704.1	13.19640	38.91330	-1.56010	2.30490	1.59880	HepG2	FIP1L1
RP11-85K15.2	ENSG00000258704.1	33.83390	67.59870	-0.99850	2.18300	1.45250	HepG2	LARP4
RP11-85K15.2	ENSG00000258704.1	36.61750	70.29010	-0.94080	1.84300	1.37880	HepG2	PTBP1
RP11-85K15.2	ENSG00000258704.1	21.76270	87.73330	-2.01130	8.07620	7.29920	HepG2	RBM22
RP11-85K15.2	ENSG00000258704.1	6.70090	29.43410	-2.13510	3.23630	2.57800	HepG2	RPS19
RP11-85K15.2	ENSG00000258704.1	22.66250	50.89740	-1.16730	2.43930	1.80770	HepG2	SF3A3
RP11-85K15.2	ENSG00000258704.1	53.31120	99.08740	-0.89430	3.29640	2.76450	HepG2	SRFBP1
RP11-85K15.2	ENSG00000258704.1	42.72800	76.38650	-0.83810	1.87610	1.46530	HepG2	SRSF1
RP11-85K15.2	ENSG00000258704.1	24.89550	58.56700	-1.23420	2.84980	1.77720	HepG2	XRCC6
RP11-85K15.2	ENSG00000258704.1	26.66740	49.64340	-0.89650	1.77820	1.31370	HepG2	ZNF622
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-85K15.2 is not available on ENCORE database.

4 RBPs can affect the splicing of RP11-85K15.2 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP11-85K15.2	ENSG00000258704.1	chr14	-	35441147	35441270	35438375	35438513	35451629	35451721	-0.29200	0.00070	0.06243	excluded	HepG2	SRSF7
SE	RP11-85K15.2	ENSG00000258704.1	chr14	-	35441147	35441270	35438375	35438513	35451629	35451721	0.81400	0.00006	0.02036	included	K562	HNRNPA1
SE	RP11-85K15.2	ENSG00000258704.1	chr14	-	35433134	35433246	35424064	35424160	35438375	35438513	-0.21500	0.00324	0.06342	excluded	HepG2	SRSF1
SE	RP11-85K15.2	ENSG00000258704.1	chr14	-	35441147	35441270	35438375	35438513	35451629	35451721	0.48600	0.00118	0.04265	included	K562	HNRNPU

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-85K15.2

General Information

Functions

Localization

Domains (AlphaFold: RP11-85K15.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-85K15.2 is not avaliable on ENCORE database.

20 proteins are bound to RP11-85K15.2 RNA:

eCLIP assay for RP11-85K15.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-85K15.2 is not available on ENCORE database.

14 RBPs can affect the gene expression of RP11-85K15.2 :

The Knockdown/knockout RNA-Seq assay for RP11-85K15.2 is not available on ENCORE database.

4 RBPs can affect the splicing of RP11-85K15.2 :

The Knockdown/knockout RNA-Seq assay for RP11-85K15.2 is not avaliable on ENCORE database.