RP11-773D16.1

General Information

Gene Name : RP11-773D16.1
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-773D16.1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-773D16.1 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-773D16.1 RNA is bound by 1 proteins.

eCLIP assay for RP11-773D16.1 is not avaliable on ENCORE database.

1 proteins are bound to RP11-773D16.1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	81586023	81586182	-	intron-Distal,intron-Proximal	3.00732	5.30849	K562	PUM1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-773D16.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-773D16.1 is not available on ENCORE database.
31 RBPs can affect the levels of RP11-773D16.1.

The Knockdown/knockout RNA-Seq assay for RP11-773D16.1 is not available on ENCORE database.

31 RBPs can affect the gene expression of RP11-773D16.1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-773D16.1	ENSG00000225484.2	83.04130	40.96070	1.01950	2.29600	1.80660	HepG2	AKAP1
RP11-773D16.1	ENSG00000225484.2	73.21700	34.86450	1.07030	2.24070	1.61810	HepG2	EIF4B
RP11-773D16.1	ENSG00000225484.2	122.65600	68.84100	0.83320	3.30740	2.65900	HepG2	ETF1
RP11-773D16.1	ENSG00000225484.2	62.60200	33.51250	0.90140	1.87540	1.32220	HepG2	G3BP1
RP11-773D16.1	ENSG00000225484.2	72.80100	43.35270	0.74770	1.81550	1.31510	HepG2	HNRNPU
RP11-773D16.1	ENSG00000225484.2	127.61110	79.65450	0.67980	2.34050	1.54460	HepG2	RBM15
RP11-773D16.1	ENSG00000225484.2	105.41070	57.54030	0.87330	2.72740	2.21180	HepG2	RBM22
RP11-773D16.1	ENSG00000225484.2	130.09960	82.96770	0.64890	2.03040	1.43450	HepG2	RPLP0
RP11-773D16.1	ENSG00000225484.2	99.80470	64.99300	0.61870	1.72650	1.30190	HepG2	SRFBP1
RP11-773D16.1	ENSG00000225484.2	128.63360	72.96430	0.81790	3.01640	2.36120	HepG2	U2AF1
RP11-773D16.1	ENSG00000225484.2	153.86390	81.16120	0.92270	4.17870	3.46690	HepG2	UTP3
RP11-773D16.1	ENSG00000225484.2	135.27140	92.45480	0.54890	1.95160	1.47030	HepG2	ZNF622
RP11-773D16.1	ENSG00000225484.2	323.18790	224.41090	0.52610	2.63340	1.48660	K562	AARS
RP11-773D16.1	ENSG00000225484.2	167.74860	301.24750	-0.84460	4.75020	4.01870	K562	AQR
RP11-773D16.1	ENSG00000225484.2	208.63720	332.22260	-0.67120	3.78760	2.76600	K562	BOP1
RP11-773D16.1	ENSG00000225484.2	289.88170	484.85070	-0.74210	7.98900	6.95950	K562	DDX47
RP11-773D16.1	ENSG00000225484.2	219.12880	304.61810	-0.47520	2.20710	1.39490	K562	FTO
RP11-773D16.1	ENSG00000225484.2	208.03370	337.29080	-0.69720	4.43940	3.44030	K562	GPKOW
RP11-773D16.1	ENSG00000225484.2	219.50230	308.93230	-0.49310	2.35340	1.65380	K562	GRSF1
RP11-773D16.1	ENSG00000225484.2	128.10760	245.30900	-0.93720	4.35420	3.62210	K562	HNRNPC
RP11-773D16.1	ENSG00000225484.2	315.45040	438.14090	-0.47400	3.04970	1.93420	K562	HNRNPL
RP11-773D16.1	ENSG00000225484.2	287.28360	198.58440	0.53260	3.02960	2.09770	K562	HNRNPU
RP11-773D16.1	ENSG00000225484.2	186.09500	287.97320	-0.62990	2.58070	1.68290	K562	KRR1
RP11-773D16.1	ENSG00000225484.2	217.26940	329.22840	-0.59960	3.43200	2.45190	K562	METAP2
RP11-773D16.1	ENSG00000225484.2	264.65690	354.73820	-0.42260	2.63220	1.90140	K562	NSUN2
RP11-773D16.1	ENSG00000225484.2	253.22970	496.83430	-0.97230	3.49140	2.08550	K562	PABPC1
RP11-773D16.1	ENSG00000225484.2	121.42300	181.82340	-0.58250	2.30840	1.57720	K562	POLR2G
RP11-773D16.1	ENSG00000225484.2	634.04810	337.52110	0.90950	8.69080	7.77730	K562	PUS1
RP11-773D16.1	ENSG00000225484.2	68.45920	119.51790	-0.80390	2.53080	1.75150	K562	RPS19
RP11-773D16.1	ENSG00000225484.2	208.33890	350.03350	-0.74860	6.21870	5.03360	K562	SF3A3
RP11-773D16.1	ENSG00000225484.2	250.05260	376.13630	-0.58900	4.58720	3.68640	K562	UPF1
RP11-773D16.1	ENSG00000225484.2	281.26060	428.70480	-0.60810	3.04710	1.78030	K562	UTP3
RP11-773D16.1	ENSG00000225484.2	246.39720	339.42220	-0.46210	2.30560	1.52940	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-773D16.1 is not available on ENCORE database.

14 RBPs can affect the splicing of RP11-773D16.1 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP11-773D16.1	ENSG00000225484.2	chr10	-	81568514	81568588			81565794	81565878	81574368	81574472	0.08400	0.00011	0.00539	included	K562	AKAP8L
SE	RP11-773D16.1	ENSG00000225484.2	chr10	-	81568514	81568588			81565794	81565878	81574368	81574472	0.23000	0.00001	0.00027	included	HepG2	U2AF2
SE	RP11-773D16.1	ENSG00000225484.2	chr10	-	81568514	81568588			81564240	81564302	81574368	81574472	-0.08400	0.00472	0.04432	excluded	K562	AQR
SE	RP11-773D16.1	ENSG00000225484.2	chr10	-	81568518	81568719			81565794	81565878	81574368	81574472	0.47700	0.00032	0.04898	included	HepG2	HNRNPUL1
SE	RP11-773D16.1	ENSG00000225484.2	chr10	-	81568514	81568588			81565794	81565878	81574368	81574472	0.09000	0.00022	0.01148	included	K562	HNRNPU
SE	RP11-773D16.1	ENSG00000225484.2	chr10	-	81568514	81568588			81565794	81565878	81574368	81574472	0.11000	0.00011	0.01831	included	K562	CPSF6
SE	RP11-773D16.1	ENSG00000225484.2	chr10	-	81565794	81565878			81564240	81564283	81568514	81568588	-0.15600	0.00016	0.05785	excluded	HepG2	DROSHA
SE	RP11-773D16.1	ENSG00000225484.2	chr10	-	81568514	81568588			81565794	81565878	81574368	81574472	-0.20300	0.00001	0.00046	excluded	K562	HNRNPC
A3SS	RP11-773D16.1	ENSG00000225484.2	chr10	-	81564240	81564412			81564240	81564283	81565794	81565878	0.16800	0.00000	0.00000	longer	K562	AQR
MXE	RP11-773D16.1	ENSG00000225484.2	chr10	-	81565794	81565878	81568518	81568719	81564240	81564283	81574368	81574472	0.09800	0.00101	0.01984	1included	K562	U2AF1
MXE	RP11-773D16.1	ENSG00000225484.2	chr10	-	81565794	81565878	81568518	81568719	81564240	81564283	81574368	81574472	0.12700	0.00565	0.07277	1included	K562	SRSF1
MXE	RP11-773D16.1	ENSG00000225484.2	chr10	-	81565794	81565878	81568518	81568719	81564240	81564283	81574368	81574472	0.10800	0.00087	0.03836	1included	K562	FXR1
MXE	RP11-773D16.1	ENSG00000225484.2	chr10	-	81568514	81568588	81568618	81568719	81564240	81564283	81574368	81574472	0.09700	0.01712	0.09717	1included	K562	AQR
MXE	RP11-773D16.1	ENSG00000225484.2	chr10	-	81565794	81565878	81568618	81568719	81564240	81564283	81574368	81574472	0.10300	0.00122	0.01087	1included	K562	AQR
MXE	RP11-773D16.1	ENSG00000225484.2	chr10	-	81565794	81565878	81568518	81568719	81564240	81564283	81574368	81574472	0.10000	0.00192	0.01609	1included	K562	AQR
MXE	RP11-773D16.1	ENSG00000225484.2	chr10	-	81565794	81565878	81568518	81568719	81564240	81564283	81574368	81574472	0.16400	0.00025	0.01295	1included	HepG2	SF3A3
MXE	RP11-773D16.1	ENSG00000225484.2	chr10	-	81565794	81565878	81568518	81568719	81564240	81564283	81574368	81574472	0.18300	0.00001	0.00072	1included	K562	EFTUD2
MXE	RP11-773D16.1	ENSG00000225484.2	chr10	-	81565794	81565878	81568518	81568719	81564240	81564283	81574368	81574472	0.06700	0.00002	0.01452	1included	K562	APOBEC3C

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-773D16.1

General Information

Functions

Localization

Domains (AlphaFold: RP11-773D16.1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-773D16.1 is not avaliable on ENCORE database.

1 proteins are bound to RP11-773D16.1 RNA:

eCLIP assay for RP11-773D16.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-773D16.1 is not available on ENCORE database.

31 RBPs can affect the gene expression of RP11-773D16.1 :

The Knockdown/knockout RNA-Seq assay for RP11-773D16.1 is not available on ENCORE database.

14 RBPs can affect the splicing of RP11-773D16.1 :

The Knockdown/knockout RNA-Seq assay for RP11-773D16.1 is not avaliable on ENCORE database.