RGS20

General Information

Gene Name       : RGS20
Gene ID             : ENSG00000147509.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RGS20)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RGS20ENSG00000147509.132.562.512.54ENCSR000AEF
HepG2RGS20ENSG00000147509.130.490.880.69ENCSR985KAT
K562RGS20ENSG00000147509.130.970.810.89ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RGS20 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RGS20 RNA is bound by 7 proteins.  







eCLIP assay for RGS20 is not avaliable on ENCORE database.





7 proteins are bound to RGS20 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr85479342054793492+5'-UTR,intron-Distal4.054056.87384K562CSTF2T
chr85479380854793877+intron-Distal3.803107.63581K562CSTF2T
chr85479445854794664+intron-Distal6.284418.62753K562GEMIN5
chr85479449254794583+intron-Distal3.950319.92038K562CSTF2T
chr85479454454794636+intron-Distal5.439965.28698K562DDX51
chr85479404254794157+intron-Distal4.2076715.90122K562CSTF2T
chr85479477254794844+intron-Distal3.889745.99425K562CSTF2T
chr85479407654794161+intron-Distal4.518993.86024K562EWSR1
chr85479464254794680+intron-Distal4.001343.19904K562TIA1
chr85479472354794769+intron-Distal3.658865.94541K562TIA1
chr85479408254794128+intron-Distal3.877933.30664K562NONO
chr85479415754794245+intron-Distal5.300579.69896K562CSTF2T
chr85479294554793031+intron-Distal,intron-Proximal3.493753.00221HepG2CSTF2T
chr85479381154793892+intron-Distal4.400244.70436K562EWSR1
chr85479402954794149+intron-Distal4.251605.73677K562FUS
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RGS20 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RGS20 is not available on ENCORE database.

  • 24 RBPs can affect the levels of RGS20.  








The Knockdown/knockout RNA-Seq assay for RGS20 is not available on ENCORE database.





24 RBPs can affect the gene expression of RGS20 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RGS20ENSG00000147509.921.565903.806302.502202.317901.75250HepG2ACO1
RGS20ENSG00000147509.957.247207.877002.861405.909305.16560HepG2AKAP1
RGS20ENSG00000147509.918.577103.828102.278702.438001.71300HepG2AKAP8L
RGS20ENSG00000147509.929.5704010.176301.538802.141101.56460HepG2CELF1
RGS20ENSG00000147509.947.659805.193303.198005.824404.75240HepG2DDX55
RGS20ENSG00000147509.914.354501.586903.177202.498601.45410HepG2AGO1
RGS20ENSG00000147509.926.618306.704501.989102.250401.62600HepG2EIF4B
RGS20ENSG00000147509.921.009103.723602.496102.932002.07490HepG2EWSR1
RGS20ENSG00000147509.973.480905.624703.707408.947507.72600HepG2RAVER1
RGS20ENSG00000147509.966.1053011.575102.513608.265707.48120HepG2RBM22
RGS20ENSG00000147509.938.5612014.839401.377602.013401.41970HepG2RPLP0
RGS20ENSG00000147509.920.412605.072602.008602.088501.38750HepG2RPS2
RGS20ENSG00000147509.921.623605.176602.062402.319401.34110HepG2RPS5
RGS20ENSG00000147509.921.446703.959402.437302.275801.55560HepG2RRP9
RGS20ENSG00000147509.967.5968013.075002.370007.917607.19050HepG2SRFBP1
RGS20ENSG00000147509.914.686803.698001.989601.832101.36560HepG2SRSF9
RGS20ENSG00000147509.982.547205.168903.9972011.6932010.46270HepG2SUPV3L1
RGS20ENSG00000147509.932.2330010.652301.597302.435401.96100HepG2TIAL1
RGS20ENSG00000147509.910.828701.089003.313702.178301.57210HepG2ZC3H8
RGS20ENSG00000147509.950.1596017.152501.548003.108201.80180K562ABCF1
RGS20ENSG00000147509.944.6417019.833101.170402.082901.51350K562AKAP8L
RGS20ENSG00000147509.992.3172042.047601.134503.371702.29450K562CELF1
RGS20ENSG00000147509.941.8761015.636901.421102.210101.38680K562KRR1
RGS20ENSG00000147509.942.4999017.870401.249802.097101.33400K562METAP2
RGS20ENSG00000147509.949.9047018.622401.422002.750001.92170K562PCBP3
RGS20ENSG00000147509.936.2699014.283801.344302.131001.42870K562POLR2G
RGS20ENSG00000147509.956.9298025.349301.167102.735001.87760K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RGS20 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RGS20 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RGS20 is not avaliable on ENCORE database.