RGAG1

General Information

Gene Name       : RGAG1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RGAG1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RGAG1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on RGAG1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for RGAG1 is not avaliable on ENCORE database.






NO known proteins are bound to RGAG1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for RGAG1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RGAG1 is not available on ENCORE database.

  • 41 RBPs can affect the levels of RGAG1.  








The Knockdown/knockout RNA-Seq assay for RGAG1 is not available on ENCORE database.





41 RBPs can affect the gene expression of RGAG1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RGAG1ENSG00000243978.478.165201.632205.5815021.0669019.61350HepG2CKAP4
RGAG1ENSG00000243978.416.337501.128503.855603.345702.35070HepG2GEMIN5
RGAG1ENSG00000243978.421.685403.897302.476102.676902.04560HepG2GPKOW
RGAG1ENSG00000243978.437.741102.339404.011807.167006.19980HepG2HNRNPA1
RGAG1ENSG00000243978.427.770402.584003.425805.416004.58950HepG2HNRNPU
RGAG1ENSG00000243978.410.178700.515104.304402.169801.58680HepG2MAGOH
RGAG1ENSG00000243978.419.877100.517605.263004.403703.62450HepG2MATR3
RGAG1ENSG00000243978.416.850102.116202.993102.774401.96440HepG2PRPF8
RGAG1ENSG00000243978.441.811900.885705.560809.041508.04760HepG2PUF60
RGAG1ENSG00000243978.417.870601.667103.422103.546002.86740HepG2PUS1
RGAG1ENSG00000243978.4100.993201.233206.3556011.5862010.43360HepG2RPS19
RGAG1ENSG00000243978.424.867000.588405.401304.611602.75830HepG2SF1
RGAG1ENSG00000243978.421.190400.623705.086304.338903.77900HepG2SRSF1
RGAG1ENSG00000243978.412.044600.873803.784902.536001.86740HepG2SRSF7
RGAG1ENSG00000243978.413.462101.465803.199002.665602.15890HepG2SSB
RGAG1ENSG00000243978.431.469002.514703.645406.296505.59770HepG2TIAL1
RGAG1ENSG00000243978.416.789904.170502.009202.012901.40050HepG2UPF1
RGAG1ENSG00000243978.415.976002.680502.575202.127001.48410HepG2XRN2
RGAG1ENSG00000243978.447.5626016.455901.531103.098301.84110K562AARS
RGAG1ENSG00000243978.42.5308014.76930-2.544901.965001.47130K562AGGF1
RGAG1ENSG00000243978.411.3529049.01940-2.110303.157702.22440K562BOP1
RGAG1ENSG00000243978.410.8758052.10970-2.260403.407602.53440K562CPSF6
RGAG1ENSG00000243978.417.8967052.84800-1.562202.570001.93900K562DDX47
RGAG1ENSG00000243978.476.3630016.448702.214806.914904.90120K562EEF2
RGAG1ENSG00000243978.49.7710028.67070-1.553002.200201.54810K562EIF2S2
RGAG1ENSG00000243978.414.5291045.63530-1.651203.461202.50430K562FIP1L1
RGAG1ENSG00000243978.412.9652044.96940-1.794302.717001.81020K562FTO
RGAG1ENSG00000243978.411.4569038.21750-1.738002.837502.07350K562GRSF1
RGAG1ENSG00000243978.476.3628033.931301.170203.691101.50870K562HNRNPH1
RGAG1ENSG00000243978.410.8839037.53070-1.785902.918501.95890K562HNRNPM
RGAG1ENSG00000243978.411.3434061.87890-2.447607.351806.07150K562HSPD1
RGAG1ENSG00000243978.424.1901051.79790-1.098502.343401.59020K562PPIG
RGAG1ENSG00000243978.419.4751056.55900-1.538103.694802.58380K562PUM2
RGAG1ENSG00000243978.439.5685014.729901.425502.514001.57220K562RCC2
RGAG1ENSG00000243978.480.0438020.399501.972204.995902.14340K562DROSHA
RGAG1ENSG00000243978.488.6609028.992701.612503.215401.64690K562SDAD1
RGAG1ENSG00000243978.425.647607.536001.766802.562301.74200K562SF3B4
RGAG1ENSG00000243978.498.8192034.979901.498205.951104.64400K562SRPK2
RGAG1ENSG00000243978.482.6265035.813801.206004.013802.17820K562SRSF9
RGAG1ENSG00000243978.418.4683059.88390-1.697104.402802.64910K562SSRP1
RGAG1ENSG00000243978.424.434307.253001.752202.378101.63340K562U2AF2
RGAG1ENSG00000243978.416.2101036.69510-1.178701.925701.31820K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RGAG1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RGAG1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RGAG1 is not avaliable on ENCORE database.