MFSD11

General Information

Gene Name       : MFSD11
Gene ID             : ENSG00000092931.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MFSD11)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MFSD11ENSG00000092931.116.297.526.90ENCSR000AEF
HepG2MFSD11ENSG00000092931.1110.8518.3214.59ENCSR985KAT
K562MFSD11ENSG00000092931.1112.9210.1211.52ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MFSD11 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MFSD11 RNA is bound by 14 proteins.  







eCLIP assay for MFSD11 is not avaliable on ENCORE database.





14 proteins are bound to MFSD11 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr177477107774771142+3'-UTR,CDS,intron-Proximal4.144363.43980K562ZNF622
chr177476581774765917+3'-UTR,CDS,intron-Proximal3.530347.01246HepG2BCLAF1
chr177473949274739539+3'-UTR,CDS,intron-Distal,intron-Proximal4.031833.20027K562ZNF622
chr177476344574763527+3'-UTR,CDS,intron-Proximal5.145826.15877HepG2U2AF2
chr177473831074738359+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.050703.80065HepG2PPIG
chr177477107974771152+3'-UTR,CDS3.211865.69345HepG2BCLAF1
chr177473947774739509+3'-UTR,CDS,intron-Distal,intron-Proximal3.761603.31827HepG2GRWD1
chr177473947974739539+3'-UTR,CDS,intron-Distal,intron-Proximal4.308005.23082K562DDX24
chr177473437674734436+3'-UTR,5'-UTR,CDS3.854418.12130HepG2PPIG
chr177474048574740556+3'-UTR,5'-UTR,CDS,intron-Proximal4.828984.55944K562ZNF622
chr177474048374740552+3'-UTR,5'-UTR,CDS,intron-Proximal5.070895.56813HepG2PPIG
chr177473430674734387+3'-UTR,5'-UTR,CDS,intron-Proximal4.1009014.33450HepG2SF3A3
chr177473833074738356+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.842093.38114HepG2GRWD1
chr177476591774765954+3'-UTR,CDS,intron-Proximal3.906383.68471HepG2BCLAF1
chr177473436274734411+3'-UTR,5'-UTR,CDS,intron-Proximal3.221034.24070HepG2GRWD1
chr177475013874750196+5'-UTR,CDS,intron-Proximal4.130259.70941HepG2PRPF8
chr177473389674733975+5'-UTR,intron-Distal,intron-Proximal3.467593.63681K562RBM15
chr177475011774750164+5'-UTR,CDS,intron-Proximal4.346094.20763HepG2U2AF2
chr177473428074734344+5'-UTR,intron-Proximal4.422753.82050HepG2SF3B4
chr177477118174771249+CDS3.215663.18789HepG2BCLAF1
chr177473805074738109+CDS,intron-Proximal4.428795.35091K562PUM2
chr177475646874756527+intron-Distal3.134833.09748HepG2ILF3
chr177475495574755018+intron-Distal3.321963.27276HepG2HNRNPL
chr177475645774756536+intron-Distal3.345484.22071K562ILF3
chr177474489574745034+intron-Distal6.1935412.52551K562PTBP1
chr177474496274745041+intron-Distal5.101118.82480HepG2PTBP1
chr177475628474756340+intron-Distal4.075903.06194K562ILF3
chr177474489674744962+intron-Distal5.4499811.05790HepG2PTBP1
chr177475023174750333+intron-Distal,intron-Proximal5.9066313.79263K562PRPF8
chr177476072074760802+intron-Distal3.513297.45054HepG2HNRNPL
chr177475025974750322+intron-Distal,intron-Proximal5.8909816.15035HepG2PRPF8
chr177475627474756340+intron-Distal3.414085.53320HepG2ILF3
chr177475522774755301+intron-Distal3.029353.37821K562ILF3
chr177475017774750231+intron-Proximal3.397664.76426K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MFSD11 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MFSD11 is not available on ENCORE database.

  • 54 RBPs can affect the levels of MFSD11.  








The Knockdown/knockout RNA-Seq assay for MFSD11 is not available on ENCORE database.





54 RBPs can affect the gene expression of MFSD11 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MFSD11ENSG00000092931.7254.52300441.59240-0.794903.956901.92610HepG2AARS
MFSD11ENSG00000092931.7610.51600242.787301.3302018.2734016.93700HepG2BOP1
MFSD11ENSG00000092931.7211.86360307.65210-0.538202.880402.09540HepG2CALR
MFSD11ENSG00000092931.7782.34360548.380400.512502.436401.72190HepG2CNOT7
MFSD11ENSG00000092931.7515.63700623.67790-0.274401.904901.35270HepG2CELF1
MFSD11ENSG00000092931.7861.91470670.691100.361803.843302.99380HepG2DAZAP1
MFSD11ENSG00000092931.7206.96810401.95720-0.957608.542707.42110HepG2DDX21
MFSD11ENSG00000092931.7313.05790445.34950-0.508503.150901.77670HepG2DDX47
MFSD11ENSG00000092931.7300.72060451.47270-0.586203.199502.54030HepG2DDX6
MFSD11ENSG00000092931.7366.22870259.040400.499502.687601.53740HepG2EIF2S2
MFSD11ENSG00000092931.7468.31890633.78860-0.436502.963402.12210HepG2EIF4G2
MFSD11ENSG00000092931.7998.57260757.786600.398004.530803.79620HepG2ETF1
MFSD11ENSG00000092931.7625.10360483.919100.369201.988001.39760HepG2FXR1
MFSD11ENSG00000092931.7706.54160448.842800.654505.068404.18050HepG2G3BP1
MFSD11ENSG00000092931.7606.87650386.833500.649604.703003.37380HepG2GNB2L1
MFSD11ENSG00000092931.7433.69730610.97380-0.494405.495304.57320HepG2HNRNPL
MFSD11ENSG00000092931.7444.94900354.098400.329402.174601.63040HepG2HNRNPU
MFSD11ENSG00000092931.7748.55060484.088600.628704.923104.05590HepG2MAGOH
MFSD11ENSG00000092931.7733.91140486.778400.592204.017903.26950HepG2MATR3
MFSD11ENSG00000092931.7628.70370443.632500.502903.222902.44510HepG2PABPC4
MFSD11ENSG00000092931.7332.21530430.86340-0.375102.395501.82150HepG2PCBP1
MFSD11ENSG00000092931.7540.56050438.428000.302001.893501.42420HepG2PTBP1
MFSD11ENSG00000092931.7395.11730634.82640-0.684106.711805.83710HepG2PUF60
MFSD11ENSG00000092931.7468.00980673.39360-0.524904.911704.03230HepG2PUM2
MFSD11ENSG00000092931.7304.93250410.39410-0.428502.623901.78680HepG2RBM15
MFSD11ENSG00000092931.7623.30130454.445000.455704.067003.33850HepG2RECQL
MFSD11ENSG00000092931.7307.33430431.73400-0.490302.342801.46990HepG2SMNDC1
MFSD11ENSG00000092931.7388.45430265.540200.548702.153501.46750HepG2SNRNP70
MFSD11ENSG00000092931.7902.80580715.383700.335603.439802.89960HepG2SRFBP1
MFSD11ENSG00000092931.7748.27700476.436000.651208.440307.71650HepG2SRSF1
MFSD11ENSG00000092931.7168.07980256.80090-0.611502.421701.49170HepG2SRSF3
MFSD11ENSG00000092931.7528.92890387.611300.448403.988103.34900HepG2SRSF9
MFSD11ENSG00000092931.7860.62650712.833400.271702.197501.63170HepG2SUCLG1
MFSD11ENSG00000092931.7986.48630440.986601.1615014.7208013.37440HepG2SUPV3L1
MFSD11ENSG00000092931.7671.97800428.256300.649806.832106.01970HepG2TAF15
MFSD11ENSG00000092931.7348.21870235.032800.567003.094302.33350HepG2TARDBP
MFSD11ENSG00000092931.7184.12980295.59840-0.682902.729601.74010HepG2TFIP11
MFSD11ENSG00000092931.7541.46850393.491100.460403.454702.52470HepG2TIA1
MFSD11ENSG00000092931.7439.41680344.073700.352801.907301.47480HepG2TIAL1
MFSD11ENSG00000092931.7486.37210620.15370-0.350602.318701.52510HepG2TUFM
MFSD11ENSG00000092931.7422.69850294.977000.518902.649602.03410HepG2U2AF1
MFSD11ENSG00000092931.7362.37430260.527300.475902.693701.94470HepG2UCHL5
MFSD11ENSG00000092931.7709.99650394.917100.8462014.0121012.67080HepG2UPF1
MFSD11ENSG00000092931.7399.35520248.441600.684706.441605.48690HepG2ZC3H8
MFSD11ENSG00000092931.7769.80520434.334700.8256015.5448014.51170HepG2ZNF622
MFSD11ENSG00000092931.7279.51970423.27420-0.598603.192201.78900HepG2ZRANB2
MFSD11ENSG00000092931.7550.04220728.43490-0.405302.605602.03200K562AQR
MFSD11ENSG00000092931.7314.88300184.421800.771704.524203.39700K562BOP1
MFSD11ENSG00000092931.7605.63320416.586000.539705.289304.34100K562EIF2S2
MFSD11ENSG00000092931.7282.55060377.71850-0.418802.551401.45910K562EIF4B
MFSD11ENSG00000092931.7341.23230217.318200.650803.719703.04110K562HNRNPC
MFSD11ENSG00000092931.7222.60260373.83590-0.747905.775104.19590K562HNRNPL
MFSD11ENSG00000092931.7499.77360396.208900.334902.095201.31930K562HNRNPU
MFSD11ENSG00000092931.7395.47780530.87300-0.424802.977301.57530K562PCBP1
MFSD11ENSG00000092931.7702.70980542.013500.374502.187101.69280K562PUS1
MFSD11ENSG00000092931.7381.13850505.89390-0.408502.123301.39160K562RBM22
MFSD11ENSG00000092931.7451.88720334.195800.435202.044401.34770K562RPS19
MFSD11ENSG00000092931.7299.43900415.39080-0.472203.178002.26070K562SF3B4
MFSD11ENSG00000092931.7281.14040517.25530-0.879609.182707.90360K562SRSF1
MFSD11ENSG00000092931.7277.82120387.24480-0.479102.332301.34050K562U2AF1
MFSD11ENSG00000092931.7486.16450351.063000.469603.761602.93580K562UPF1
MFSD11ENSG00000092931.7422.65520312.399400.436002.728101.88660K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MFSD11 is not available on ENCORE database.





3 RBPs can affect the splicing of MFSD11 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMFSD11ENSG00000092931.7chr17+7474065674740719747404037474054874750128747501690.080000.001350.01572includedK562AQR
SEMFSD11ENSG00000092931.7chr17+747382587473835574738050747381307474040374740548-0.298000.000350.01090excludedHepG2SRSF1
A3SSMFSD11ENSG00000092931.7chr17+7473500274735075747350197473507574734363747345300.253000.000010.00009longerK562AQR
A3SSMFSD11ENSG00000092931.7chr17+7473801074738130747380507473813074737038747371460.186000.000310.01746longerK562U2AF1
A5SSMFSD11ENSG00000092931.7chr17+747501287475028674750128747501697476346774763533-0.158000.000560.03562shorterHepG2SRSF1
MXEMFSD11ENSG00000092931.7chr17+7473825874738355747394797473953874738050747381307474040374740548-0.212000.004790.075792includedHepG2SRSF1
MXEMFSD11ENSG00000092931.7chr17+74740656747407197475012874750169747404037474054874763467747635330.086000.001170.010451includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MFSD11 is not avaliable on ENCORE database.