KCNG3

General Information

Gene Name       : KCNG3
Gene ID             : ENSG00000171126.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: KCNG3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878KCNG3ENSG00000171126.70.060.010.03ENCSR000AEF
HepG2KCNG3ENSG00000171126.70.841.080.96ENCSR985KAT
K562KCNG3ENSG00000171126.70.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for KCNG3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • KCNG3 RNA is bound by 3 proteins.  







eCLIP assay for KCNG3 is not avaliable on ENCORE database.





3 proteins are bound to KCNG3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr24272104542721116-5'-UTR,intron-Distal4.433685.12808HepG2NCBP2
chr24272105342721119-5'-UTR,intron-Distal,intron-Proximal4.473754.66990HepG2DDX3X
chr24272084242720903-5'-UTR,intron-Distal3.932525.48791HepG2DDX3X
chr24272005042720148-CDS,intron-Distal3.292205.30095HepG2PPIG
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for KCNG3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for KCNG3 is not available on ENCORE database.

  • 57 RBPs can affect the levels of KCNG3.  








The Knockdown/knockout RNA-Seq assay for KCNG3 is not available on ENCORE database.





57 RBPs can affect the gene expression of KCNG3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
KCNG3ENSG00000171126.738.4963073.53560-0.933702.327501.41260HepG2ADAR
KCNG3ENSG00000171126.773.21690176.00330-1.265406.608005.41910HepG2ASCC1
KCNG3ENSG00000171126.724.7291056.96660-1.203902.551301.97330HepG2BOP1
KCNG3ENSG00000171126.747.1086084.36020-0.840602.501701.86280HepG2CKAP4
KCNG3ENSG00000171126.779.74930125.79730-0.657602.651001.92200HepG2DAZAP1
KCNG3ENSG00000171126.744.0504078.02600-0.824802.515001.71680HepG2DDX19B
KCNG3ENSG00000171126.738.2162075.64880-0.985102.527201.87600HepG2DDX21
KCNG3ENSG00000171126.731.4718080.70930-1.358704.361503.54850HepG2DKC1
KCNG3ENSG00000171126.743.6836073.39820-0.748701.931301.36890HepG2DNAJC2
KCNG3ENSG00000171126.733.5887072.75010-1.115002.474601.60020HepG2EEF2
KCNG3ENSG00000171126.779.08110168.26050-1.089304.976904.19450HepG2EIF2S1
KCNG3ENSG00000171126.748.95030185.92910-1.9254012.9662011.60970HepG2EIF4A3
KCNG3ENSG00000171126.779.66120181.06350-1.184505.047704.13740HepG2EIF4B
KCNG3ENSG00000171126.770.52280144.97630-1.039704.520003.78620HepG2ETF1
KCNG3ENSG00000171126.7101.81310187.65090-0.882103.896103.08460HepG2FXR1
KCNG3ENSG00000171126.773.85220174.04410-1.236706.496905.50130HepG2G3BP1
KCNG3ENSG00000171126.778.55600184.80880-1.234206.668805.27530HepG2G3BP2
KCNG3ENSG00000171126.752.76790129.87440-1.299402.954001.80450HepG2GRSF1
KCNG3ENSG00000171126.721.2798074.75220-1.812605.415704.55430HepG2HNRNPA1
KCNG3ENSG00000171126.736.9564083.15110-1.169903.102502.37380HepG2HNRNPC
KCNG3ENSG00000171126.790.68300176.30460-0.959204.222703.37560HepG2HNRNPK
KCNG3ENSG00000171126.773.67960114.60470-0.637302.228301.61380HepG2HNRNPL
KCNG3ENSG00000171126.738.0148082.60110-1.119603.825503.12320HepG2HNRNPU
KCNG3ENSG00000171126.7101.77500176.90150-0.797603.268902.54040HepG2IGF2BP2
KCNG3ENSG00000171126.788.73760166.05690-0.904102.494401.56610HepG2IGF2BP3
KCNG3ENSG00000171126.795.26120177.95240-0.901503.542402.38980HepG2KHSRP
KCNG3ENSG00000171126.734.83340100.63750-1.530605.532803.75720HepG2KRR1
KCNG3ENSG00000171126.768.06870187.71670-1.463508.705007.55670HepG2MAGOH
KCNG3ENSG00000171126.7107.69430188.75810-0.809603.208202.53320HepG2MATR3
KCNG3ENSG00000171126.748.02380124.73810-1.377107.019205.81380HepG2NOL12
KCNG3ENSG00000171126.7238.07520128.257300.892302.149501.38330HepG2PABPC1
KCNG3ENSG00000171126.7103.67990172.02040-0.730402.907202.16840HepG2PABPC4
KCNG3ENSG00000171126.735.4971081.75710-1.203603.892402.90660HepG2PARN
KCNG3ENSG00000171126.767.55580173.55870-1.361309.034008.03980HepG2PCBP1
KCNG3ENSG00000171126.737.5664093.12340-1.309704.396403.10590HepG2PCBP2
KCNG3ENSG00000171126.7109.53060176.59860-0.689103.360702.76980HepG2PTBP1
KCNG3ENSG00000171126.759.59820126.37530-1.084405.435004.66130HepG2PUM1
KCNG3ENSG00000171126.768.21790126.29160-0.888503.519902.76760HepG2PUM2
KCNG3ENSG00000171126.776.45470121.17480-0.664401.959101.50340HepG2RBM22
KCNG3ENSG00000171126.785.31100196.54050-1.204007.485406.67230HepG2NELFE
KCNG3ENSG00000171126.795.16210183.04490-0.943705.032404.23170HepG2RECQL
KCNG3ENSG00000171126.739.0106088.28700-1.178303.426802.37630HepG2RPS10
KCNG3ENSG00000171126.720.6131057.46510-1.479103.597602.90580HepG2RPS19
KCNG3ENSG00000171126.743.6130097.07520-1.154303.240602.37390HepG2RPS2
KCNG3ENSG00000171126.761.02120141.03000-1.208602.537701.77090HepG2RPS3A
KCNG3ENSG00000171126.799.35410183.86890-0.888004.546503.81680HepG2SF3B4
KCNG3ENSG00000171126.753.1634085.77820-0.690201.881801.33400HepG2SMN1
KCNG3ENSG00000171126.748.8023091.68610-0.909802.639401.70490HepG2SMNDC1
KCNG3ENSG00000171126.790.09210191.91650-1.091006.322405.67910HepG2SRSF1
KCNG3ENSG00000171126.779.85410117.53940-0.557701.841001.31610HepG2SRSF5
KCNG3ENSG00000171126.757.41050118.83580-1.049604.381903.76700HepG2SSB
KCNG3ENSG00000171126.750.28150100.32650-0.996603.232101.85160HepG2SSRP1
KCNG3ENSG00000171126.750.35210101.60250-1.012802.966001.59030HepG2SUGP2
KCNG3ENSG00000171126.723.0226098.54470-2.097707.151305.52430HepG2TBRG4
KCNG3ENSG00000171126.723.8603080.25090-1.749906.510605.80340HepG2TIAL1
KCNG3ENSG00000171126.737.8611080.98070-1.096903.550702.92930HepG2TRIM56
KCNG3ENSG00000171126.769.91750116.29550-0.734102.415401.60320HepG2TUFM
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for KCNG3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of KCNG3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for KCNG3 is not avaliable on ENCORE database.