EGR2

General Information

Gene Name       : EGR2
Gene ID             : ENSG00000122877.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: EGR2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878EGR2ENSG00000122877.1513.8113.6013.71ENCSR000AEF
HepG2EGR2ENSG00000122877.150.000.000.00ENCSR985KAT
K562EGR2ENSG00000122877.150.080.080.08ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for EGR2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • EGR2 RNA is bound by 3 proteins.  







eCLIP assay for EGR2 is not avaliable on ENCORE database.





3 proteins are bound to EGR2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr106457361364573623-CDS,intron-Distal7.5269726.60226K562WRN
chr106457361364573623-CDS,intron-Distal5.0650015.17342K562DDX3X
chr106457362364573635-CDS,intron-Distal5.0650015.17342K562DDX3X
chr106457361464573618-CDS,intron-Distal5.150055.30220K562NPM1
chr106457361864573635-CDS,intron-Distal5.150055.30220K562NPM1
chr106457362464573635-CDS,intron-Distal7.5269726.60226K562WRN
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for EGR2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for EGR2 is not available on ENCORE database.

  • 31 RBPs can affect the levels of EGR2.  








The Knockdown/knockout RNA-Seq assay for EGR2 is not available on ENCORE database.





31 RBPs can affect the gene expression of EGR2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
EGR2ENSG00000122877.947.917000.0000099999.9999011.5155010.50270HepG2AKAP1
EGR2ENSG00000122877.921.910200.0000099999.999906.326205.16180HepG2ASCC1
EGR2ENSG00000122877.920.409803.635202.489102.687702.09730HepG2BOP1
EGR2ENSG00000122877.915.467302.249402.781502.600901.85220HepG2CALR
EGR2ENSG00000122877.936.070400.0000099999.999909.641208.53480HepG2DDX3X
EGR2ENSG00000122877.941.7805010.947001.932203.967002.43140HepG2DDX47
EGR2ENSG00000122877.940.346603.789503.412304.393203.17300HepG2DDX59
EGR2ENSG00000122877.943.444300.0000099999.9999012.2478011.05760HepG2DDX6
EGR2ENSG00000122877.911.131900.0000099999.999902.806502.11270HepG2EIF4B
EGR2ENSG00000122877.929.804901.488704.323306.258205.41590HepG2ETF1
EGR2ENSG00000122877.929.047303.343403.118903.593702.43070HepG2FTO
EGR2ENSG00000122877.97.514700.0000099999.999902.187601.59320HepG2G3BP1
EGR2ENSG00000122877.97.435500.0000099999.999901.943501.35190HepG2HNRNPK
EGR2ENSG00000122877.98.798400.0000099999.999902.222001.65320HepG2MATR3
EGR2ENSG00000122877.934.267703.542603.273904.242602.95250HepG2METAP2
EGR2ENSG00000122877.916.893800.0000099999.999904.605703.79940HepG2NCBP2
EGR2ENSG00000122877.925.112505.303602.243202.856901.95310HepG2PABPC1
EGR2ENSG00000122877.917.769000.0000099999.999905.395604.39790HepG2PABPC4
EGR2ENSG00000122877.957.077603.461004.043607.861406.96790HepG2PUM1
EGR2ENSG00000122877.914.060501.422103.305502.264401.62210HepG2RAVER1
EGR2ENSG00000122877.929.675202.361603.651305.550104.38710HepG2RBM15
EGR2ENSG00000122877.915.598101.243903.648403.005502.47160HepG2RBM22
EGR2ENSG00000122877.936.371403.286003.468306.367305.47610HepG2RPS19
EGR2ENSG00000122877.924.178503.571902.758803.396502.62130HepG2SF3B1
EGR2ENSG00000122877.954.733501.404205.2845013.1487012.27240HepG2SRFBP1
EGR2ENSG00000122877.930.581003.844802.991504.139702.88970HepG2SRSF3
EGR2ENSG00000122877.921.517603.319202.696502.837501.49230HepG2SUGP2
EGR2ENSG00000122877.932.138903.970203.016904.369403.58840HepG2U2AF1
EGR2ENSG00000122877.923.267301.215004.259203.372702.27970HepG2U2AF2
EGR2ENSG00000122877.916.995602.333102.864802.973002.25320HepG2UPF1
EGR2ENSG00000122877.915.027502.565902.550002.335201.82050HepG2ZNF622
EGR2ENSG00000122877.913.137100.871103.914602.987601.84480K562U2AF1
EGR2ENSG00000122877.916.615100.899404.207304.168003.18520K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for EGR2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of EGR2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for EGR2 is not avaliable on ENCORE database.