CECR5

General Information

Gene Name       : CECR5
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CECR5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CECR5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CECR5 RNA is bound by 3 proteins.  







eCLIP assay for CECR5 is not avaliable on ENCORE database.





3 proteins are bound to CECR5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr221762392317624043-CDS,intron-Distal,intron-Proximal3.234653.47285K562PRPF8
chr221762392217624008-CDS,intron-Distal,intron-Proximal5.066316.75320K562AQR
chr221762586317625914-intron-Distal,intron-Proximal3.823594.00320K562AQR
chr221762840917628515-intron-Distal5.025695.59072K562EIF4G2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CECR5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CECR5 is not available on ENCORE database.

  • 43 RBPs can affect the levels of CECR5.  








The Knockdown/knockout RNA-Seq assay for CECR5 is not available on ENCORE database.





43 RBPs can affect the gene expression of CECR5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CECR5ENSG00000069998.8745.15870391.032000.9302015.7933014.55170K562AGGF1
CECR5ENSG00000069998.8615.25330429.709800.517704.257102.98310K562AKAP8
CECR5ENSG00000069998.8677.28380406.892600.735007.736406.59430K562AKAP8L
CECR5ENSG00000069998.8570.30590770.53180-0.434102.408901.85520K562AQR
CECR5ENSG00000069998.8540.51910426.939800.340202.445101.59070K562ATP5C1
CECR5ENSG00000069998.8139.96040236.86010-0.759003.726502.71240K562BOP1
CECR5ENSG00000069998.8591.51840467.284900.340002.409101.32270K562CCDC124
CECR5ENSG00000069998.8151.31810251.85020-0.735004.033303.08640K562CPSF6
CECR5ENSG00000069998.8731.11290984.19820-0.428904.339103.10940K562CELF1
CECR5ENSG00000069998.8552.47860385.942500.517405.033503.23910K562DDX27
CECR5ENSG00000069998.8717.21690437.807300.712009.814607.95610K562DKC1
CECR5ENSG00000069998.8437.05390579.62130-0.407303.310302.53540K562EIF2S2
CECR5ENSG00000069998.8469.44400330.657900.505503.255802.33260K562FIP1L1
CECR5ENSG00000069998.8153.01550256.25160-0.743904.056903.01710K562FMR1
CECR5ENSG00000069998.877.57930221.90310-1.516209.984608.48340K562G3BP2
CECR5ENSG00000069998.8326.44600439.21840-0.428102.775701.63420K562GLRX3
CECR5ENSG00000069998.8133.63170240.45500-0.847504.787703.74640K562GPKOW
CECR5ENSG00000069998.8953.81070772.322800.304401.954901.31370K562GRSF1
CECR5ENSG00000069998.8196.92520393.85750-1.000008.877107.85870K562HNRNPC
CECR5ENSG00000069998.8629.66550483.956200.379602.582101.56260K562HNRNPL
CECR5ENSG00000069998.8476.69300271.976200.809505.622304.23180K562HNRNPM
CECR5ENSG00000069998.8602.47880772.04740-0.357802.990802.06260K562HNRNPU
CECR5ENSG00000069998.8677.76860431.793400.650406.041004.71680K562KIF1C
CECR5ENSG00000069998.8111.26520205.31850-0.883903.689402.59310K562KRR1
CECR5ENSG00000069998.8581.30860371.437800.646106.062504.80060K562MAGOH
CECR5ENSG00000069998.8916.28440483.720600.9215014.3098012.01100K562MBNL1
CECR5ENSG00000069998.8611.42990853.03030-0.480404.192102.80390K562MSI2
CECR5ENSG00000069998.8519.92230339.055000.616702.798101.90870K562NAA15
CECR5ENSG00000069998.8390.91060513.04340-0.392203.127502.33790K562NSUN2
CECR5ENSG00000069998.8290.72520507.46490-0.803704.448102.85130K562PABPC1
CECR5ENSG00000069998.8262.43800442.13440-0.752505.107103.97530K562PCBP3
CECR5ENSG00000069998.8198.39900339.13820-0.773505.795004.63950K562POLR2G
CECR5ENSG00000069998.8551.57660375.369900.555104.002402.99190K562PPIG
CECR5ENSG00000069998.8663.95370403.482200.718506.621905.82360K562PUS1
CECR5ENSG00000069998.8653.25310393.168800.732408.007807.03060K562RBM15
CECR5ENSG00000069998.8113.46210217.81200-0.940903.784801.96620K562TAF15
CECR5ENSG00000069998.8148.25520231.16870-0.640903.173801.45900K562TBRG4
CECR5ENSG00000069998.8473.98720345.377700.456602.946902.09890K562TIA1
CECR5ENSG00000069998.8458.27080339.001800.434802.464001.44600K562TRA2A
CECR5ENSG00000069998.8476.17560360.969900.399502.195401.36700K562TRIM56
CECR5ENSG00000069998.8260.19690368.18890-0.500802.303601.38300K562UCHL5
CECR5ENSG00000069998.8220.26090543.99440-1.3044022.0067020.22220K562UPF1
CECR5ENSG00000069998.8644.86040867.99350-0.428703.452902.47080K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CECR5 is not available on ENCORE database.





3 RBPs can affect the splicing of CECR5 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECECR5ENSG00000069998.8chr22-176219481762212317619439176196281762398717624021-0.113000.003320.03330excludedK562AQR
SECECR5ENSG00000069998.8chr22-1761943917619628176184711761924717621948176221230.093000.000160.02974includedK562ZC3H8
A3SSCECR5ENSG00000069998.8chr22-1762591317626059176259131762600717629337176294180.219000.000080.00068longerK562AQR
A3SSCECR5ENSG00000069998.8chr22-1762933717629534176293371762945017630431176306350.230000.000000.00000longerK562AQR
MXECECR5ENSG00000069998.8chr22-17619439176196281762398717624021176184091761924717625913176260070.231000.001320.057871includedK562SAFB

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CECR5 is not avaliable on ENCORE database.