ACTR5

General Information

Gene Name       : ACTR5
Gene ID             : ENSG00000101442.9
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: ACTR5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ACTR5ENSG00000101442.94.644.784.71ENCSR000AEF
HepG2ACTR5ENSG00000101442.911.5112.0911.80ENCSR985KAT
K562ACTR5ENSG00000101442.97.408.688.04ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ACTR5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ACTR5 RNA is bound by 14 proteins.  







eCLIP assay for ACTR5 is not avaliable on ENCORE database.





14 proteins are bound to ACTR5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr203740071437400797+3'-UTR5.108796.34419K562PUM2
chr203740064337400741+3'-UTR3.207233.51117HepG2LSM11
chr203740031337400468+3'-UTR,CDS4.148004.71605K562FUS
chr203739410937394168+CDS,intron-Proximal3.215664.26492HepG2BCLAF1
chr203738462737384672+CDS3.660684.41267HepG2PPIG
chr203739399937394084+CDS,intron-Proximal4.6901824.34534K562AQR
chr203739399437394100+CDS,intron-Proximal3.8911811.40615K562BUD13
chr203739487637394933+CDS,intron-Proximal3.466294.10684HepG2AQR
chr203739620737396278+CDS,intron-Proximal4.093254.75655HepG2PRPF8
chr203739399837394081+CDS,intron-Proximal4.4503114.34382HepG2AQR
chr203739404137394092+CDS,intron-Proximal3.005163.99124HepG2PPIG
chr203740028737400426+CDS3.568384.63292HepG2PABPN1
chr203739372637393810+intron-Distal6.518439.27808K562WRN
chr203739043537390501+intron-Distal4.285724.27476HepG2AQR
chr203739033037390429+intron-Distal3.972187.71102K562ZNF622
chr203739044637390572+intron-Distal3.476499.74437K562BUD13
chr203739019537390212+intron-Distal6.5252412.38263K562LARP7
chr203739016937390195+intron-Distal6.5642413.11517K562LARP7
chr203739048237390570+intron-Distal3.819364.09885HepG2BCLAF1
chr203739033937390403+intron-Distal4.387144.19577K562DGCR8
chr203739033437390403+intron-Distal7.0348073.43813K562LARP7
chr203739028837390334+intron-Distal7.5604429.98652K562LARP7
chr203739044837390575+intron-Distal4.4884222.68514K562AQR
chr203739028837390334+intron-Distal7.0172811.39978HepG2LARP7
chr203737752637377581+intron-Proximal4.345136.08255HepG2RBM22
chr203739416437394203+intron-Proximal4.566313.11721K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ACTR5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ACTR5 is not available on ENCORE database.

  • 22 RBPs can affect the levels of ACTR5.  








The Knockdown/knockout RNA-Seq assay for ACTR5 is not available on ENCORE database.





22 RBPs can affect the gene expression of ACTR5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ACTR5ENSG00000101442.8143.95950203.72460-0.501001.857501.35910HepG2BOP1
ACTR5ENSG00000101442.8116.77040187.02720-0.679602.775002.08720HepG2CPSF6
ACTR5ENSG00000101442.8592.58450446.875200.407002.146001.58830HepG2DDX3X
ACTR5ENSG00000101442.8309.71040443.14680-0.516903.014702.16530HepG2EIF4G2
ACTR5ENSG00000101442.8514.92230386.650100.413202.224701.59360HepG2HNRNPK
ACTR5ENSG00000101442.8575.52560413.974100.475202.525901.92080HepG2MATR3
ACTR5ENSG00000101442.8595.59820423.711000.491202.866302.22250HepG2NCBP2
ACTR5ENSG00000101442.8850.61160470.816000.8532012.5399011.17310HepG2PUM2
ACTR5ENSG00000101442.8488.86250373.094100.389802.217901.60880HepG2RBM25
ACTR5ENSG00000101442.8162.83680241.83120-0.570603.176602.49620HepG2SAFB2
ACTR5ENSG00000101442.8605.91960335.317400.853506.622605.55150HepG2SF3A3
ACTR5ENSG00000101442.8237.48840367.74070-0.630803.418402.67650HepG2SUPV3L1
ACTR5ENSG00000101442.8433.82860265.420200.708704.763203.95210HepG2U2AF1
ACTR5ENSG00000101442.8489.48730287.104200.769608.255807.31000HepG2UTP3
ACTR5ENSG00000101442.8361.51970281.504700.360801.889001.40280K562AGGF1
ACTR5ENSG00000101442.8419.34870292.915700.517603.183702.48210K562AKAP8L
ACTR5ENSG00000101442.8467.51210354.300200.399902.709702.06400K562DDX47
ACTR5ENSG00000101442.8399.34630274.072900.543003.913103.21200K562FXR1
ACTR5ENSG00000101442.8350.73500244.095400.522802.157101.40040K562NAA15
ACTR5ENSG00000101442.8443.80570268.378800.725604.884603.89050K562PRPF8
ACTR5ENSG00000101442.8365.29000283.043500.367901.869801.36500K562RBM15
ACTR5ENSG00000101442.8281.31200209.231500.427002.039301.30670K562SF3B4
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ACTR5 is not available on ENCORE database.





8 RBPs can affect the splicing of ACTR5 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEACTR5ENSG00000101442.8chr20+3739029537390467373844993738468237394044373941610.207000.000240.04000includedHepG2KHSRP
A3SSACTR5ENSG00000101442.8chr20+3739488037395020373948993739502037394044373941610.237000.000050.02375longerHepG2AKAP1
A3SSACTR5ENSG00000101442.8chr20+3739488037395020373948993739502037394044373941610.255000.000010.00517longerHepG2MATR3
A3SSACTR5ENSG00000101442.8chr20+3739488037395020373948993739502037394044373941610.309000.000710.07601longerK562FXR1
A3SSACTR5ENSG00000101442.8chr20+373948803739502037394899373950203739404437394161-0.295000.000050.07021shorterK562ABCF1
A3SSACTR5ENSG00000101442.8chr20+373948803739502037394899373950203739404437394161-0.353000.000010.00967shorterHepG2TIA1
A3SSACTR5ENSG00000101442.8chr20+3739488037395020373948993739502037394044373941610.318000.000040.00533longerK562SRSF1
A3SSACTR5ENSG00000101442.8chr20+3739488037395020373948993739502037394044373941610.246000.000010.00163longerK562PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ACTR5 is not avaliable on ENCORE database.