TP53I3

General Information

Gene Name : TP53I3
Gene ID : ENSG00000115129.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TP53I3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TP53I3	ENSG00000115129.13	2.94	4.39	3.67	ENCSR000AEF
HepG2	TP53I3	ENSG00000115129.13	27.91	18.02	22.96	ENCSR985KAT
K562	TP53I3	ENSG00000115129.13	3.48	3.84	3.66	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TP53I3 is not avaliable on ENCORE database.

Proteins bound to RNA

TP53I3 RNA is bound by 5 proteins.

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eCLIP assay for TP53I3 is not avaliable on ENCORE database.

5 proteins are bound to TP53I3 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	24307524	24307629	-	5'-UTR,intron-Distal,intron-Proximal	3.62803	14.39387	HepG2	PRPF8
chr2	24307008	24307065	-	CDS,intron-Distal,intron-Proximal	6.14851	12.84241	HepG2	PRPF8
chr2	24307539	24307589	-	5'-UTR,intron-Distal,intron-Proximal	5.74264	9.88352	HepG2	BUD13
chr2	24305907	24306016	-	CDS,intron-Distal	4.23668	9.56105	HepG2	PPIG
chr2	24307348	24307422	-	5'-UTR,intron-Distal,intron-Proximal	3.94896	9.08333	HepG2	PRPF8
chr2	24307478	24307524	-	5'-UTR,intron-Distal,intron-Proximal	5.59422	8.72621	HepG2	PRPF8
chr2	24307069	24307173	-	CDS,intron-Distal	3.15336	6.69553	HepG2	PPIG
chr2	24307173	24307297	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.81401	6.53375	HepG2	AQR
chr2	24307344	24307403	-	5'-UTR,intron-Distal,intron-Proximal	4.48633	6.41037	HepG2	BUD13
chr2	24307198	24307250	-	5'-UTR,intron-Distal,intron-Proximal	3.28837	6.22359	HepG2	BUD13
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 14 entries

eCLIP assay for TP53I3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TP53I3 is not available on ENCORE database.
128 RBPs can affect the levels of TP53I3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TP53I3 is not available on ENCORE database.

128 RBPs can affect the gene expression of TP53I3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TP53I3	ENSG00000115129.9	2465.62370	190.74560	3.69210	194.86740	191.28030	HepG2	RPS19
TP53I3	ENSG00000115129.9	7090.14870	284.48720	4.63930	127.18370	124.77900	HepG2	TIAL1
TP53I3	ENSG00000115129.9	1971.95170	512.25440	1.94460	105.27880	102.23550	HepG2	SRSF5
TP53I3	ENSG00000115129.9	2859.52570	475.77450	2.58730	74.87860	72.73750	HepG2	AKAP1
TP53I3	ENSG00000115129.9	1408.17760	293.33640	2.26310	69.27630	66.69280	HepG2	DDX21
TP53I3	ENSG00000115129.9	1434.99860	446.20150	1.68520	64.57480	62.97640	HepG2	SRSF1
TP53I3	ENSG00000115129.9	1658.27280	626.23770	1.40480	57.86360	56.26860	HepG2	SSB
TP53I3	ENSG00000115129.9	1299.27590	456.95380	1.50750	47.34780	45.73950	HepG2	NELFE
TP53I3	ENSG00000115129.9	983.47730	297.26620	1.72600	45.05920	43.02650	HepG2	ZC3H8
TP53I3	ENSG00000115129.9	1928.10260	491.91660	1.97060	44.50020	42.43690	HepG2	SUPV3L1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 148 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TP53I3 is not available on ENCORE database.

4 RBPs can affect the splicing of TP53I3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TP53I3	ENSG00000115129.9	chr2	-	24302313	24302510			24300302	24300631	24303688	24303901	0.08200	0.00001	0.00042	included	HepG2	SRSF1
SE	TP53I3	ENSG00000115129.9	chr2	-	24302313	24302510			24300302	24300631	24303688	24303901	-0.17600	0.00001	0.00063	excluded	HepG2	HNRNPC
A3SS	TP53I3	ENSG00000115129.9	chr2	-	24300503	24300728			24300503	24300631	24303688	24303862	0.53800	0.00008	0.01010	longer	HepG2	SRSF1
MXE	TP53I3	ENSG00000115129.9	chr2	-	24305754	24306022	24307058	24307201	24303688	24303901	24307600	24308085	0.20600	0.00035	0.01630	1included	HepG2	XRN2
SE	TP53I3	ENSG00000115129.9	chr2	-	24302313	24302510			24300302	24300631	24303688	24303901	0.06700	0.00054	0.04175	included	HepG2	HNRNPL
MXE	TP53I3	ENSG00000115129.9	chr2	-	24302313	24302510	24303688	24303862	24300503	24300728	24305754	24306022	-0.51200	0.00311	0.05567	2included	HepG2	SRSF1

Showing 1 to 6 of 6 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TP53I3

General Information

Functions

Localization

Domains (AlphaFold: TP53I3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TP53I3 is not avaliable on ENCORE database.

5 proteins are bound to TP53I3 RNA:

eCLIP assay for TP53I3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TP53I3 is not available on ENCORE database.

128 RBPs can affect the gene expression of TP53I3 :

The Knockdown/knockout RNA-Seq assay for TP53I3 is not available on ENCORE database.

4 RBPs can affect the splicing of TP53I3 :

The Knockdown/knockout RNA-Seq assay for TP53I3 is not avaliable on ENCORE database.