TMEM45B

General Information

Gene Name : TMEM45B
Gene ID : ENSG00000151715.7
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TMEM45B)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TMEM45B	ENSG00000151715.7	0.00	0.00	0.00	ENCSR000AEF
HepG2	TMEM45B	ENSG00000151715.7	31.59	30.43	31.01	ENCSR985KAT
K562	TMEM45B	ENSG00000151715.7	0.00	0.00	0.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TMEM45B is not avaliable on ENCORE database.

Proteins bound to RNA

TMEM45B RNA is bound by 25 proteins.

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eCLIP assay for TMEM45B is not avaliable on ENCORE database.

25 proteins are bound to TMEM45B RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	129689435	129689511	+	intron-Distal	4.65325	56.71813	HepG2	PTBP1
chr11	129685926	129686076	+	intron-Distal	4.87630	31.48789	HepG2	PRPF4
chr11	129685746	129685798	+	5'-UTR,intron-Proximal	5.08081	27.55914	HepG2	DDX3X
chr11	129725602	129725671	+	CDS,intron-Proximal	3.98424	20.22019	HepG2	SND1
chr11	129724628	129724708	+	CDS	4.99403	17.93419	HepG2	SND1
chr11	129727344	129727390	+	CDS,intron-Proximal	5.34038	17.79328	HepG2	PRPF8
chr11	129692263	129692380	+	intron-Distal	4.59819	16.22742	HepG2	MATR3
chr11	129691734	129691836	+	intron-Distal	3.15254	12.39155	HepG2	MATR3
chr11	129705454	129705551	+	intron-Distal	4.22351	12.37621	HepG2	HLTF
chr11	129725453	129725578	+	intron-Distal,intron-Proximal	5.72019	12.16319	HepG2	QKI
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 68 entries

eCLIP assay for TMEM45B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TMEM45B is not available on ENCORE database.
124 RBPs can affect the levels of TMEM45B.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TMEM45B is not available on ENCORE database.

124 RBPs can affect the gene expression of TMEM45B :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TMEM45B	ENSG00000151715.3	753.77270	4849.69110	-2.68570	214.89900	212.49920	HepG2	SRSF1
TMEM45B	ENSG00000151715.3	1294.44570	4966.63650	-1.93990	141.40060	139.10060	HepG2	NELFE
TMEM45B	ENSG00000151715.3	1451.33190	4626.03420	-1.67240	104.47800	101.88280	HepG2	RECQL
TMEM45B	ENSG00000151715.3	4816.84750	1597.73840	1.59200	78.09200	75.54540	HepG2	UPF1
TMEM45B	ENSG00000151715.3	1294.15520	3034.88870	-1.22960	70.57970	68.26610	HepG2	SUCLG1
TMEM45B	ENSG00000151715.3	1395.47910	4817.39520	-1.78750	52.25500	49.65450	HepG2	MAGOH
TMEM45B	ENSG00000151715.3	1433.06040	4815.70960	-1.74860	52.15940	49.60990	HepG2	FXR1
TMEM45B	ENSG00000151715.3	1487.50410	2869.05160	-0.94770	48.60350	46.75040	HepG2	PUM1
TMEM45B	ENSG00000151715.3	2035.77590	583.15540	1.80350	47.80090	45.69070	HepG2	HNRNPLL
TMEM45B	ENSG00000151715.3	2000.96440	4359.47850	-1.12350	46.56450	44.63060	HepG2	TAF15
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 127 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TMEM45B is not available on ENCORE database.

10 RBPs can affect the splicing of TMEM45B :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TMEM45B	ENSG00000151715.3	chr11	+	129727933	129728033			129727207	129727353	129728468	129729898	0.05900	0.00000	0.00000	included	HepG2	U2AF1
SE	TMEM45B	ENSG00000151715.3	chr11	+	129727933	129728033			129727207	129727353	129728468	129729898	0.10100	0.00000	0.00000	included	HepG2	U2AF2
SE	TMEM45B	ENSG00000151715.3	chr11	+	129698041	129698148			129685757	129685793	129722369	129722555	0.06500	0.00000	0.00010	included	HepG2	NCBP2
SE	TMEM45B	ENSG00000151715.3	chr11	+	129720444	129720499			129685713	129685793	129722369	129722555	0.05300	0.00000	0.00018	included	HepG2	MATR3
SE	TMEM45B	ENSG00000151715.3	chr11	+	129698041	129698148			129685757	129685793	129722369	129722555	0.05200	0.00002	0.00732	included	HepG2	KHSRP
MXE	TMEM45B	ENSG00000151715.3	chr11	+	129698041	129698148	129709447	129709597	129696918	129697009	129722369	129722555	0.46400	0.00003	0.00241	1included	HepG2	NCBP2
MXE	TMEM45B	ENSG00000151715.3	chr11	+	129698041	129698148	129709447	129709597	129696918	129697009	129722369	129722555	0.39400	0.00005	0.01134	1included	HepG2	KHSRP
SE	TMEM45B	ENSG00000151715.3	chr11	+	129698041	129698148			129685757	129685793	129722369	129722555	-0.12800	0.00012	0.02521	excluded	HepG2	HNRNPUL1
SE	TMEM45B	ENSG00000151715.3	chr11	+	129698041	129698148			129685757	129685793	129722369	129722555	-0.11800	0.00034	0.00559	excluded	HepG2	U2AF2
SE	TMEM45B	ENSG00000151715.3	chr11	+	129698041	129698148			129685757	129685793	129722369	129722555	0.05500	0.00034	0.03034	included	HepG2	IGF2BP3

Showing 1 to 10 of 16 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TMEM45B

General Information

Functions

Localization

Domains (AlphaFold: TMEM45B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TMEM45B is not avaliable on ENCORE database.

25 proteins are bound to TMEM45B RNA:

eCLIP assay for TMEM45B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TMEM45B is not available on ENCORE database.

124 RBPs can affect the gene expression of TMEM45B :

The Knockdown/knockout RNA-Seq assay for TMEM45B is not available on ENCORE database.

10 RBPs can affect the splicing of TMEM45B :

The Knockdown/knockout RNA-Seq assay for TMEM45B is not avaliable on ENCORE database.