SOCS2

General Information

Gene Name : SOCS2
Gene ID : ENSG00000120833.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SOCS2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SOCS2	ENSG00000120833.13	11.86	8.17	10.02	ENCSR000AEF
HepG2	SOCS2	ENSG00000120833.13	1.57	2.29	1.93	ENCSR985KAT
K562	SOCS2	ENSG00000120833.13	88.27	100.43	94.35	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SOCS2 is not avaliable on ENCORE database.

Proteins bound to RNA

SOCS2 RNA is bound by 11 proteins.

CanvasJS.com

eCLIP assay for SOCS2 is not avaliable on ENCORE database.

11 proteins are bound to SOCS2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	93966427	93966530	+	3'-UTR,5'-UTR,intron-Proximal	4.44186	14.31693	K562	BUD13
chr12	93968799	93968908	+	3'-UTR,CDS	4.20126	13.19940	K562	YBX3
chr12	93966811	93966888	+	CDS,intron-Proximal	4.45511	13.11100	K562	AQR
chr12	93966669	93966779	+	3'-UTR,5'-UTR,CDS	4.00326	9.54304	K562	RBM15
chr12	93966504	93966530	+	3'-UTR,5'-UTR	3.06489	8.24506	K562	YBX3
chr12	93966553	93966594	+	3'-UTR,5'-UTR	3.40483	7.64771	K562	RBM15
chr12	93969272	93969320	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.92091	7.40140	K562	YBX3
chr12	93966429	93966489	+	3'-UTR,5'-UTR,intron-Proximal	4.25389	6.48405	K562	AQR
chr12	93969491	93969580	+	3'-UTR,intron-Distal	3.18311	5.72056	K562	IGF2BP1
chr12	93969777	93969829	+	3'-UTR,intron-Distal	4.44324	5.66560	K562	TIA1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 22 entries

eCLIP assay for SOCS2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SOCS2 is not available on ENCORE database.
137 RBPs can affect the levels of SOCS2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SOCS2 is not available on ENCORE database.

137 RBPs can affect the gene expression of SOCS2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SOCS2	ENSG00000120833.9	769.63390	46.83980	4.03830	124.62610	122.22990	HepG2	RBM22
SOCS2	ENSG00000120833.9	457.26260	10.79550	5.40440	110.51520	107.67330	HepG2	UTP3
SOCS2	ENSG00000120833.9	757.82280	22.86750	5.05040	93.09980	89.82680	HepG2	FIP1L1
SOCS2	ENSG00000120833.9	509.69230	52.90960	3.26790	75.88630	74.18720	HepG2	SRFBP1
SOCS2	ENSG00000120833.9	5865.77140	1883.68700	1.63870	57.12800	54.37360	K562	HSPD1
SOCS2	ENSG00000120833.9	290.10900	16.60220	4.12700	52.73670	51.24670	HepG2	SRSF1
SOCS2	ENSG00000120833.9	397.96330	25.26620	3.97730	52.89850	49.52870	HepG2	XRCC6
SOCS2	ENSG00000120833.9	3932.11000	1888.72450	1.05780	48.74230	46.36500	K562	DDX47
SOCS2	ENSG00000120833.9	3358.51280	1346.95270	1.31800	40.79340	38.67260	K562	EIF2S2
SOCS2	ENSG00000120833.9	456.10860	56.03690	3.02480	39.84850	38.06570	HepG2	ETF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 171 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SOCS2 is not available on ENCORE database.

7 RBPs can affect the splicing of SOCS2 :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
RI	SOCS2	ENSG00000120833.9	chr12	+	93966460	93969982	93966460	93966812	93968497	93969982	0.18800	0.00000	0.00000	included	K562	PUS1
RI	SOCS2	ENSG00000120833.9	chr12	+	93966460	93969982	93966460	93966812	93968497	93969982	0.06700	0.00000	0.00000	included	K562	AKAP8L
RI	SOCS2	ENSG00000120833.9	chr12	+	93966460	93969982	93966460	93966812	93968497	93969982	0.05900	0.00000	0.00001	included	K562	RBM15
RI	SOCS2	ENSG00000120833.9	chr12	+	93966460	93969982	93966460	93966812	93968497	93969982	0.10500	0.00000	0.00000	included	K562	UTP18
RI	SOCS2	ENSG00000120833.9	chr12	+	93966460	93969982	93966460	93966812	93968497	93969982	0.07800	0.00103	0.00692	included	K562	AQR
RI	SOCS2	ENSG00000120833.9	chr12	+	93966460	93969982	93966460	93966812	93968497	93969982	-0.05300	0.00767	0.09140	excluded	K562	FXR1
RI	SOCS2	ENSG00000120833.9	chr12	+	93966460	93969982	93966460	93966812	93968497	93969982	0.12600	0.00770	0.07989	included	K562	U2AF2

Showing 1 to 7 of 7 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SOCS2

General Information

Functions

Localization

Domains (AlphaFold: SOCS2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SOCS2 is not avaliable on ENCORE database.

11 proteins are bound to SOCS2 RNA:

eCLIP assay for SOCS2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SOCS2 is not available on ENCORE database.

137 RBPs can affect the gene expression of SOCS2 :

The Knockdown/knockout RNA-Seq assay for SOCS2 is not available on ENCORE database.

7 RBPs can affect the splicing of SOCS2 :

The Knockdown/knockout RNA-Seq assay for SOCS2 is not avaliable on ENCORE database.