PTOV1

General Information

Gene Name : PTOV1
Gene ID : ENSG00000104960.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PTOV1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PTOV1	ENSG00000104960.15	2.26	14.45	8.36	ENCSR000AEF
HepG2	PTOV1	ENSG00000104960.15	98.46	33.26	65.86	ENCSR985KAT
K562	PTOV1	ENSG00000104960.15	58.73	41.51	50.12	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PTOV1 is not avaliable on ENCORE database.

Proteins bound to RNA

PTOV1 RNA is bound by 48 proteins.

CanvasJS.com

eCLIP assay for PTOV1 is not avaliable on ENCORE database.

48 proteins are bound to PTOV1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	50361927	50362011	+	intron-Distal,intron-Proximal	4.97063	28.94135	K562	AQR
chr19	50361383	50361416	+	intron-Proximal	4.41284	28.69508	HepG2	PRPF8
chr19	50361367	50361383	+	3'-UTR,CDS,intron-Proximal	4.29577	25.42953	HepG2	PRPF8
chr19	50358332	50358377	+	CDS,intron-Distal,intron-Proximal	3.93921	22.23767	HepG2	PRPF8
chr19	50359953	50360048	+	intron-Distal	4.68172	21.48037	HepG2	PRPF4
chr19	50361845	50361901	+	3'-UTR,CDS	4.82402	20.87700	HepG2	PPIG
chr19	50358105	50358146	+	CDS,intron-Proximal	4.65785	20.36554	HepG2	PPIG
chr19	50359475	50359556	+	intron-Distal	5.02302	20.31278	HepG2	XPO5
chr19	50358225	50358272	+	CDS,intron-Distal,intron-Proximal	4.31762	20.27334	HepG2	PPIG
chr19	50363186	50363259	+	3'-UTR,CDS,intron-Distal,intron-Proximal	5.49878	19.67516	HepG2	SF3A3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 209 entries

eCLIP assay for PTOV1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PTOV1 is not available on ENCORE database.
92 RBPs can affect the levels of PTOV1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PTOV1 is not available on ENCORE database.

92 RBPs can affect the gene expression of PTOV1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PTOV1	ENSG00000104960.11	3021.60930	1629.70190	0.89060	34.23800	32.31380	K562	AGGF1
PTOV1	ENSG00000104960.11	720.04870	1497.74380	-1.05660	33.79360	32.27940	HepG2	SRSF9
PTOV1	ENSG00000104960.11	3864.60430	1681.62150	1.20040	30.32150	28.49860	K562	PUS1
PTOV1	ENSG00000104960.11	753.51960	1421.24140	-0.91540	23.89490	22.39540	HepG2	UTP3
PTOV1	ENSG00000104960.11	803.13190	1654.74160	-1.04290	23.56360	22.15150	HepG2	TAF15
PTOV1	ENSG00000104960.11	2713.06010	1638.60770	0.72740	17.81420	16.28720	K562	RBM15
PTOV1	ENSG00000104960.11	3073.64220	1695.79910	0.85790	14.12580	12.47050	K562	AKAP8L
PTOV1	ENSG00000104960.11	1310.39850	844.77410	0.63330	12.54730	11.33460	HepG2	HNRNPU
PTOV1	ENSG00000104960.11	1141.08450	750.56410	0.60430	12.27250	11.00350	HepG2	DNAJC2
PTOV1	ENSG00000104960.11	1121.64130	752.31480	0.57610	9.87480	8.77530	HepG2	SAFB2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 105 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PTOV1 is not available on ENCORE database.

7 RBPs can affect the splicing of PTOV1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	PTOV1	ENSG00000104960.11	chr19	+	50361126	50361234	50361160	50361234	50360949	50361039	0.06600	0.00000	0.00000	longer	K562	AQR
A3SS	PTOV1	ENSG00000104960.11	chr19	+	50363822	50363997	50363870	50363997	50363524	50363593	0.09200	0.00000	0.00014	longer	HepG2	HNRNPL
RI	PTOV1	ENSG00000104960.11	chr19	+	50361126	50361371	50361126	50361234	50361313	50361371	0.06000	0.00000	0.00000	included	K562	AQR
RI	PTOV1	ENSG00000104960.11	chr19	+	50358074	50358322	50358074	50358145	50358226	50358322	0.06900	0.00000	0.00000	included	K562	AQR
A3SS	PTOV1	ENSG00000104960.11	chr19	+	50363822	50363997	50363870	50363997	50363524	50363593	0.07200	0.00001	0.02529	longer	HepG2	NOL12
A3SS	PTOV1	ENSG00000104960.11	chr19	+	50363822	50363997	50363870	50363997	50363524	50363593	0.07500	0.00001	0.01747	longer	HepG2	DDX3X
A3SS	PTOV1	ENSG00000104960.11	chr19	+	50363822	50363997	50363870	50363997	50363536	50363593	0.15200	0.00006	0.07126	longer	K562	SAFB
A3SS	PTOV1	ENSG00000104960.11	chr19	+	50363822	50363997	50363870	50363997	50363524	50363593	0.08300	0.00016	0.08320	longer	HepG2	KHSRP
A3SS	PTOV1	ENSG00000104960.11	chr19	+	50363822	50363997	50363870	50363997	50363524	50363593	0.06500	0.00022	0.05379	longer	HepG2	NCBP2
A3SS	PTOV1	ENSG00000104960.11	chr19	+	50363822	50363996	50363846	50363996	50363524	50363593	-0.39500	0.01670	0.08191	shorter	K562	AQR

Showing 1 to 10 of 10 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PTOV1

General Information

Functions

Localization

Domains (AlphaFold: PTOV1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PTOV1 is not avaliable on ENCORE database.

48 proteins are bound to PTOV1 RNA:

eCLIP assay for PTOV1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PTOV1 is not available on ENCORE database.

92 RBPs can affect the gene expression of PTOV1 :

The Knockdown/knockout RNA-Seq assay for PTOV1 is not available on ENCORE database.

7 RBPs can affect the splicing of PTOV1 :

The Knockdown/knockout RNA-Seq assay for PTOV1 is not avaliable on ENCORE database.