ODAM

General Information

Gene Name : ODAM
Gene ID : ENSG00000109205.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ODAM)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ODAM	ENSG00000109205.16	0.00	0.00	0.00	ENCSR000AEF
HepG2	ODAM	ENSG00000109205.16	50.98	53.19	52.08	ENCSR985KAT
K562	ODAM	ENSG00000109205.16	0.00	0.00	0.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ODAM is not avaliable on ENCORE database.

Proteins bound to RNA

ODAM RNA is bound by 3 proteins.

CanvasJS.com

eCLIP assay for ODAM is not avaliable on ENCORE database.

3 proteins are bound to ODAM RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr4	71066215	71066288	+	5'-UTR,CDS	4.80349	13.28648	HepG2	IGF2BP1
chr4	71067961	71068037	+	3'-UTR,CDS,intron-Proximal	4.09880	7.97066	HepG2	U2AF2
chr4	71067262	71067320	+	intron-Distal,intron-Proximal	4.90886	4.45977	HepG2	U2AF2
chr4	71068606	71068634	+	3'-UTR,CDS	3.73226	4.09794	HepG2	IGF2BP1
chr4	71068008	71068037	+	3'-UTR,CDS	4.16068	3.16051	HepG2	PPIG
chr4	71068872	71068912	+	3'-UTR,CDS,intron-Proximal	3.70610	3.15019	HepG2	IGF2BP1
chr4	71067978	71068017	+	3'-UTR,CDS	4.11374	3.06406	HepG2	IGF2BP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 7 of 7 entries

eCLIP assay for ODAM is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ODAM is not available on ENCORE database.
157 RBPs can affect the levels of ODAM.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ODAM is not available on ENCORE database.

157 RBPs can affect the gene expression of ODAM :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ODAM	ENSG00000109205.12	3556.04670	515.49000	2.78620	131.60010	129.58460	HepG2	SRSF1
ODAM	ENSG00000109205.12	10182.12430	1277.99370	2.99400	102.11120	98.01670	HepG2	CCAR1
ODAM	ENSG00000109205.12	2686.65760	991.68150	1.43780	97.74750	94.83430	HepG2	HNRNPL
ODAM	ENSG00000109205.12	2177.92090	722.40800	1.59200	93.55910	90.56980	HepG2	DDX19B
ODAM	ENSG00000109205.12	2222.51980	795.55560	1.48210	78.01380	75.72050	HepG2	PUS1
ODAM	ENSG00000109205.12	40.90700	602.06900	-3.87950	76.19810	73.72280	HepG2	SUPV3L1
ODAM	ENSG00000109205.12	2179.90050	445.68480	2.29010	69.27260	66.42840	HepG2	FXR1
ODAM	ENSG00000109205.12	34.92600	823.21060	-4.55890	68.20240	66.10880	HepG2	BOP1
ODAM	ENSG00000109205.12	3050.87830	649.32220	2.23210	69.78450	65.89360	HepG2	RCC2
ODAM	ENSG00000109205.12	1561.58430	491.67570	1.66710	66.74150	64.57500	HepG2	RECQL
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 157 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ODAM is not available on ENCORE database.

16 RBPs can affect the splicing of ODAM :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ODAM	ENSG00000109205.12	chr4	+	71067170	71067218			71066213	71066318	71067974	71068046	-0.14700	0.00000	0.00024	excluded	HepG2	RBM22
SE	ODAM	ENSG00000109205.12	chr4	+	71064295	71064343			71063445	71063874	71066213	71066290	-0.10400	0.00000	0.00000	excluded	HepG2	U2AF1
SE	ODAM	ENSG00000109205.12	chr4	+	71067170	71067218			71066213	71066318	71067974	71068046	-0.21000	0.00000	0.00014	excluded	HepG2	HNRNPK
SE	ODAM	ENSG00000109205.12	chr4	+	71064295	71064343			71063445	71063874	71066213	71066290	-0.14800	0.00000	0.00000	excluded	HepG2	U2AF2
MXE	ODAM	ENSG00000109205.12	chr4	+	71064295	71064343	71066213	71066318	71063640	71063874	71067974	71068046	-0.12600	0.00000	0.00011	2included	HepG2	U2AF1
SE	ODAM	ENSG00000109205.12	chr4	+	71067170	71067218			71066213	71066318	71067974	71068046	0.23600	0.00002	0.00042	included	HepG2	U2AF2
SE	ODAM	ENSG00000109205.12	chr4	+	71067170	71067218			71066213	71066318	71067974	71068046	0.11600	0.00002	0.01664	included	HepG2	SMNDC1
SE	ODAM	ENSG00000109205.12	chr4	+	71065818	71065866			71064295	71064343	71066213	71066318	0.05500	0.00004	0.00419	included	HepG2	SFPQ
SE	ODAM	ENSG00000109205.12	chr4	+	71067170	71067218			71066213	71066318	71067974	71068046	0.23500	0.00009	0.00784	included	HepG2	SFPQ
SE	ODAM	ENSG00000109205.12	chr4	+	71067170	71067218			71066213	71066318	71067974	71068046	0.09200	0.00010	0.01082	included	HepG2	HNRNPL

Showing 1 to 10 of 22 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ODAM

General Information

Functions

Localization

Domains (AlphaFold: ODAM)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ODAM is not avaliable on ENCORE database.

3 proteins are bound to ODAM RNA:

eCLIP assay for ODAM is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ODAM is not available on ENCORE database.

157 RBPs can affect the gene expression of ODAM :

The Knockdown/knockout RNA-Seq assay for ODAM is not available on ENCORE database.

16 RBPs can affect the splicing of ODAM :

The Knockdown/knockout RNA-Seq assay for ODAM is not avaliable on ENCORE database.