NAV2

General Information

Gene Name : NAV2
Gene ID : ENSG00000166833.20
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NAV2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NAV2	ENSG00000166833.20	1.06	1.00	1.03	ENCSR000AEF
HepG2	NAV2	ENSG00000166833.20	18.30	13.96	16.13	ENCSR985KAT
K562	NAV2	ENSG00000166833.20	0.11	0.05	0.08	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NAV2 is not avaliable on ENCORE database.

Proteins bound to RNA

NAV2 RNA is bound by 19 proteins.

CanvasJS.com

eCLIP assay for NAV2 is not avaliable on ENCORE database.

19 proteins are bound to NAV2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	20114839	20114958	+	intron-Distal,intron-Proximal	7.29283	38.87250	HepG2	QKI
chr11	20072931	20073004	+	intron-Distal,intron-Proximal	6.32640	23.14960	HepG2	RBFOX2
chr11	20115003	20115055	+	intron-Distal	6.36764	18.28830	HepG2	QKI
chr11	20098146	20098253	+	intron-Distal	4.69100	12.18529	HepG2	QKI
chr11	20104115	20104173	+	CDS,intron-Distal,intron-Proximal	5.95259	11.01763	HepG2	U2AF2
chr11	20142936	20143062	+	3'-UTR	4.20472	10.39320	HepG2	PCBP2
chr11	20095939	20096026	+	intron-Distal	4.35906	9.41611	HepG2	MATR3
chr11	20095976	20096031	+	intron-Distal	3.64264	8.49452	HepG2	SUGP2
chr11	20114965	20115003	+	intron-Distal	5.17639	8.32953	HepG2	QKI
chr11	20101772	20101823	+	intron-Proximal	4.18260	8.04968	HepG2	EFTUD2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 56 entries

eCLIP assay for NAV2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NAV2 is not available on ENCORE database.
123 RBPs can affect the levels of NAV2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NAV2 is not available on ENCORE database.

123 RBPs can affect the gene expression of NAV2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NAV2	ENSG00000166833.15	6109.26180	2968.32770	1.04120	67.44370	65.81910	HepG2	SRFBP1
NAV2	ENSG00000166833.15	396.30230	2109.64240	-2.41230	45.44960	42.39560	HepG2	SNRNP70
NAV2	ENSG00000166833.15	1131.91160	3167.58840	-1.48460	29.86830	28.35260	HepG2	AKAP1
NAV2	ENSG00000166833.15	950.85180	1769.87250	-0.89640	25.73660	23.67860	HepG2	PARN
NAV2	ENSG00000166833.15	1250.09720	2628.02550	-1.07190	24.33990	23.10670	HepG2	RBM22
NAV2	ENSG00000166833.15	986.19480	2070.51920	-1.07000	25.62040	22.90190	HepG2	TUFM
NAV2	ENSG00000166833.15	113.26520	6.61230	4.09830	23.15850	21.40700	K562	EIF2S2
NAV2	ENSG00000166833.15	1154.91030	2706.90260	-1.22890	22.50710	21.04330	HepG2	RECQL
NAV2	ENSG00000166833.15	761.14160	1762.40190	-1.21130	22.75630	19.99530	HepG2	RBM27
NAV2	ENSG00000166833.15	3350.60480	2238.89240	0.58150	20.46290	18.79390	HepG2	DAZAP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 125 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NAV2 is not available on ENCORE database.

18 RBPs can affect the splicing of NAV2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	NAV2	ENSG00000166833.15	chr11	+	20072834	20072879			20070273	20070741	20075625	20075786	-0.24800	0.00006	excluded	HepG2	U2AF1
SE	NAV2	ENSG00000166833.15	chr11	+	20104137	20104146			20101609	20101755	20104552	20104725	0.49300	0.00002	included	HepG2	QKI
SE	NAV2	ENSG00000166833.15	chr11	+	20071381	20071447			20070273	20070741	20072834	20072879	0.72800	0.00000	included	HepG2	QKI
SE	NAV2	ENSG00000166833.15	chr11	+	20071381	20071447			20070273	20070741	20072834	20072879	0.48900	0.00000	included	HepG2	U2AF2
SE	NAV2	ENSG00000166833.15	chr11	+	20072834	20072879			20070273	20070741	20075625	20075786	-0.58900	0.00000	excluded	HepG2	U2AF2
SE	NAV2	ENSG00000166833.15	chr11	+	20072834	20072879			20070273	20070741	20075625	20075786	-0.45800	0.00005	excluded	HepG2	SFPQ
SE	NAV2	ENSG00000166833.15	chr11	+	20071381	20071447			20070273	20070741	20072834	20072879	0.81000	0.00000	included	HepG2	PTBP1
SE	NAV2	ENSG00000166833.15	chr11	+	20071381	20071447			20070273	20070741	20072834	20072879	0.52200	0.00000	included	HepG2	SRSF1
SE	NAV2	ENSG00000166833.15	chr11	+	20072834	20072879			20070273	20070741	20075625	20075786	-0.34500	0.00024	excluded	HepG2	FUBP3
MXE	NAV2	ENSG00000166833.15	chr11	+	20071381	20071447	20072834	20072879	20070273	20070741	20075625	20075786	0.36000	0.00004	1included	HepG2	SRSF1

Showing 1 to 10 of 29 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NAV2

General Information

Functions

Localization

Domains (AlphaFold: NAV2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NAV2 is not avaliable on ENCORE database.

19 proteins are bound to NAV2 RNA:

eCLIP assay for NAV2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NAV2 is not available on ENCORE database.

123 RBPs can affect the gene expression of NAV2 :

The Knockdown/knockout RNA-Seq assay for NAV2 is not available on ENCORE database.

18 RBPs can affect the splicing of NAV2 :

The Knockdown/knockout RNA-Seq assay for NAV2 is not avaliable on ENCORE database.