MYBBP1A

General Information

Gene Name : MYBBP1A
Gene ID : ENSG00000132382.14
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MYBBP1A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MYBBP1A	ENSG00000132382.14	11.21	36.91	24.06	ENCSR000AEF
HepG2	MYBBP1A	ENSG00000132382.14	53.61	28.57	41.09	ENCSR985KAT
K562	MYBBP1A	ENSG00000132382.14	53.30	47.56	50.43	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MYBBP1A is not avaliable on ENCORE database.

Proteins bound to RNA

MYBBP1A RNA is bound by 23 proteins.

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eCLIP assay for MYBBP1A is not avaliable on ENCORE database.

23 proteins are bound to MYBBP1A RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	4455233	4455287	-	CDS,intron-Distal	5.41616	21.25094	HepG2	PPIG
chr17	4444829	4444907	-	CDS,intron-Distal,intron-Proximal	6.38454	19.65873	HepG2	SF3B4
chr17	4448458	4448569	-	CDS,intron-Distal,intron-Proximal	5.78059	18.87516	HepG2	PRPF8
chr17	4448319	4448395	-	CDS,intron-Distal,intron-Proximal	4.03426	16.24592	HepG2	PPIG
chr17	4446481	4446537	-	intron-Distal,intron-Proximal	4.56404	15.66089	HepG2	SF3B4
chr17	4447735	4447801	-	CDS,intron-Distal,intron-Proximal	4.21260	13.56463	HepG2	PRPF8
chr17	4448186	4448217	-	CDS,intron-Distal,intron-Proximal	4.29855	12.76865	HepG2	PPIG
chr17	4449014	4449057	-	CDS,intron-Distal,intron-Proximal	4.03812	12.68282	HepG2	PPIG
chr17	4455433	4455476	-	CDS,intron-Distal,intron-Proximal	5.00074	12.59749	HepG2	PPIG
chr17	4457313	4457342	-	CDS,intron-Distal,intron-Proximal	4.18855	11.91397	HepG2	PPIG
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 98 entries

eCLIP assay for MYBBP1A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MYBBP1A is not available on ENCORE database.
123 RBPs can affect the levels of MYBBP1A.

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The Knockdown/knockout RNA-Seq assay for MYBBP1A is not available on ENCORE database.

123 RBPs can affect the gene expression of MYBBP1A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MYBBP1A	ENSG00000132382.10	2258.45050	984.90730	1.19720	62.13220	60.10550	HepG2	PUM1
MYBBP1A	ENSG00000132382.10	1362.97260	503.46700	1.43670	42.83050	39.69840	K562	EIF3G
MYBBP1A	ENSG00000132382.10	5008.37350	2653.73090	0.91620	40.21750	38.02710	K562	DDX47
MYBBP1A	ENSG00000132382.10	2065.64440	1041.84830	0.98730	37.70380	35.86970	HepG2	SUCLG1
MYBBP1A	ENSG00000132382.10	2180.61380	1025.54320	1.08820	35.94220	33.89170	K562	FXR1
MYBBP1A	ENSG00000132382.10	604.17260	1229.17960	-1.02470	30.16350	28.40040	HepG2	ZC3H8
MYBBP1A	ENSG00000132382.10	1370.41490	606.84290	1.17510	27.16890	25.18040	K562	PTBP1
MYBBP1A	ENSG00000132382.10	1204.88350	614.71330	0.97080	25.21270	23.72320	HepG2	TRIM56
MYBBP1A	ENSG00000132382.10	2151.45310	1300.11680	0.72660	21.09110	19.66850	HepG2	UTP3
MYBBP1A	ENSG00000132382.10	2370.43780	949.58520	1.31970	19.34880	17.79980	HepG2	MATR3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 145 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MYBBP1A is not available on ENCORE database.

7 RBPs can affect the splicing of MYBBP1A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A5SS	MYBBP1A	ENSG00000132382.10	chr17	-	4448553	4448640	4448561	4448640	4448320	4448470	-0.17700	0.00004	0.01763	shorter	HepG2	TBRG4
RI	MYBBP1A	ENSG00000132382.10	chr17	-	4448320	4448640	4448320	4448470	4448561	4448640	-0.24000	0.00007	0.00853	excluded	HepG2	TBRG4
RI	MYBBP1A	ENSG00000132382.10	chr17	-	4448320	4448640	4448320	4448470	4448561	4448640	-0.18300	0.00021	0.02747	excluded	HepG2	CDC40
RI	MYBBP1A	ENSG00000132382.10	chr17	-	4448320	4448640	4448320	4448470	4448561	4448640	0.08700	0.00047	0.03516	included	K562	PPIL4
RI	MYBBP1A	ENSG00000132382.10	chr17	-	4457104	4457388	4457104	4457212	4457313	4457388	-0.06000	0.00070	0.01425	excluded	K562	FXR1
RI	MYBBP1A	ENSG00000132382.10	chr17	-	4448320	4448640	4448320	4448470	4448561	4448640	-0.32900	0.00071	0.04081	excluded	HepG2	HNRNPA1
RI	MYBBP1A	ENSG00000132382.10	chr17	-	4448320	4448640	4448320	4448470	4448553	4448640	0.07400	0.00096	0.02343	included	HepG2	KHSRP
RI	MYBBP1A	ENSG00000132382.10	chr17	-	4448320	4448640	4448320	4448470	4448553	4448640	0.07200	0.00126	0.02698	included	HepG2	IGF2BP3

Showing 1 to 8 of 8 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MYBBP1A

General Information

Functions

Localization

Domains (AlphaFold: MYBBP1A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MYBBP1A is not avaliable on ENCORE database.

23 proteins are bound to MYBBP1A RNA:

eCLIP assay for MYBBP1A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MYBBP1A is not available on ENCORE database.

123 RBPs can affect the gene expression of MYBBP1A :

The Knockdown/knockout RNA-Seq assay for MYBBP1A is not available on ENCORE database.

7 RBPs can affect the splicing of MYBBP1A :

The Knockdown/knockout RNA-Seq assay for MYBBP1A is not avaliable on ENCORE database.