MTA1

General Information

Gene Name : MTA1
Gene ID : ENSG00000182979.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MTA1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MTA1	ENSG00000182979.17	6.07	20.66	13.37	ENCSR000AEF
HepG2	MTA1	ENSG00000182979.17	58.07	20.71	39.39	ENCSR985KAT
K562	MTA1	ENSG00000182979.17	32.83	19.81	26.32	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MTA1 is not avaliable on ENCORE database.

Proteins bound to RNA

MTA1 RNA is bound by 52 proteins.

CanvasJS.com

eCLIP assay for MTA1 is not avaliable on ENCORE database.

52 proteins are bound to MTA1 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr14	105933427	105933511	+	intron-Distal	4.69809	42.51817	HepG2	RBFOX2
chr14	105933050	105933124	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.90633	40.27095	HepG2	PRPF8
chr14	105933372	105933427	+	intron-Distal	4.15945	30.09195	HepG2	RBFOX2
chr14	105916509	105916574	+	3'-UTR,CDS,intron-Proximal	3.85422	29.67093	HepG2	PRPF8
chr14	105930479	105930529	+	3'-UTR,5'-UTR,CDS,intron-Proximal	5.57251	22.64395	HepG2	PRPF8
chr14	105916574	105916642	+	3'-UTR,CDS,intron-Proximal	3.46720	21.38649	HepG2	PRPF8
chr14	105933135	105933200	+	intron-Distal,intron-Proximal	3.69533	20.60527	HepG2	RBFOX2
chr14	105930978	105931035	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.88114	20.50766	HepG2	PRPF8
chr14	105935751	105935837	+	3'-UTR,CDS,intron-Proximal	3.80723	20.37926	K562	SF3B4
chr14	105934387	105934560	+	5'-UTR,intron-Distal	3.48348	19.15064	HepG2	RBFOX2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 356 entries

eCLIP assay for MTA1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MTA1 is not available on ENCORE database.
89 RBPs can affect the levels of MTA1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MTA1 is not available on ENCORE database.

89 RBPs can affect the gene expression of MTA1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MTA1	ENSG00000182979.13	878.18690	1537.84250	-0.80830	23.14280	21.53960	HepG2	ZC3H8
MTA1	ENSG00000182979.13	865.68800	1634.79970	-0.91720	20.58310	19.54520	HepG2	SRSF1
MTA1	ENSG00000182979.13	1004.68930	2054.78040	-1.03220	19.23580	17.52770	HepG2	U2AF1
MTA1	ENSG00000182979.13	1385.65630	798.12050	0.79580	18.98540	17.51790	HepG2	SAFB2
MTA1	ENSG00000182979.13	1445.16370	2150.25890	-0.57330	16.76000	15.69670	HepG2	ZNF622
MTA1	ENSG00000182979.13	1429.10810	878.66230	0.70160	15.83090	14.63620	HepG2	TRIM56
MTA1	ENSG00000182979.13	1005.01850	1911.82850	-0.92770	14.42780	13.23390	K562	AQR
MTA1	ENSG00000182979.13	2117.03230	1489.36090	0.50720	13.83470	12.72050	HepG2	PUM1
MTA1	ENSG00000182979.13	764.04460	1777.80460	-1.21840	13.43810	11.73670	HepG2	SNRNP70
MTA1	ENSG00000182979.13	1226.12270	2189.16350	-0.83630	12.27800	11.34650	HepG2	RBM22
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 102 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MTA1 is not available on ENCORE database.

39 RBPs can affect the splicing of MTA1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	MTA1	ENSG00000182979.13	chr14	+	105933043	105933079	105931670	105932915	105935803	105935835	-0.19300	0.00000	excluded	K562	WDR43
SE	MTA1	ENSG00000182979.13	chr14	+	105933043	105933079	105931670	105932915	105935803	105935835	0.13900	0.00011	included	HepG2	AKAP1
SE	MTA1	ENSG00000182979.13	chr14	+	105933043	105933079	105931670	105932915	105935803	105935835	0.13100	0.00125	included	HepG2	DDX6
SE	MTA1	ENSG00000182979.13	chr14	+	105933043	105933079	105931670	105932915	105935803	105935835	0.12400	0.00117	included	HepG2	SSB
SE	MTA1	ENSG00000182979.13	chr14	+	105933043	105933079	105931670	105932915	105935803	105935835	-0.38400	0.00000	excluded	HepG2	PCBP1
SE	MTA1	ENSG00000182979.13	chr14	+	105933043	105933079	105931670	105932915	105935803	105935835	-0.18800	0.00073	excluded	HepG2	FUBP3
RI	MTA1	ENSG00000182979.13	chr14	+	105916394	105916661	105916394	105916521	105916597	105916661	0.17900	0.00000	included	HepG2	U2AF2
RI	MTA1	ENSG00000182979.13	chr14	+	105916394	105916661	105916394	105916521	105916597	105916661	0.21900	0.00000	included	HepG2	PRPF8
RI	MTA1	ENSG00000182979.13	chr14	+	105916394	105916661	105916394	105916521	105916597	105916661	0.08000	0.00009	included	HepG2	MATR3
RI	MTA1	ENSG00000182979.13	chr14	+	105930799	105931200	105930799	105930904	105931010	105931200	0.10200	0.00000	included	K562	RBM22

Showing 1 to 10 of 64 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MTA1

General Information

Functions

Localization

Domains (AlphaFold: MTA1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MTA1 is not avaliable on ENCORE database.

52 proteins are bound to MTA1 RNA:

eCLIP assay for MTA1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MTA1 is not available on ENCORE database.

89 RBPs can affect the gene expression of MTA1 :

The Knockdown/knockout RNA-Seq assay for MTA1 is not available on ENCORE database.

39 RBPs can affect the splicing of MTA1 :

The Knockdown/knockout RNA-Seq assay for MTA1 is not avaliable on ENCORE database.