MANSC1

General Information

Gene Name : MANSC1
Gene ID : ENSG00000111261.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MANSC1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MANSC1	ENSG00000111261.13	0.12	0.10	0.11	ENCSR000AEF
HepG2	MANSC1	ENSG00000111261.13	6.95	10.60	8.78	ENCSR985KAT
K562	MANSC1	ENSG00000111261.13	4.45	5.81	5.13	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MANSC1 is not avaliable on ENCORE database.

Proteins bound to RNA

MANSC1 RNA is bound by 2 proteins.

CanvasJS.com

eCLIP assay for MANSC1 is not avaliable on ENCORE database.

2 proteins are bound to MANSC1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	12503009	12503127	-	5'-UTR,intron-Distal	4.64900	9.66125	HepG2	DDX3X
chr12	12483381	12483433	-	CDS,intron-Distal	4.22124	8.39478	HepG2	IGF2BP1
chr12	12483343	12483381	-	CDS,intron-Distal	3.88795	6.75303	HepG2	IGF2BP1
chr12	12483438	12483492	-	CDS,intron-Distal	4.12903	4.47310	HepG2	IGF2BP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 4 of 4 entries

eCLIP assay for MANSC1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MANSC1 is not available on ENCORE database.
99 RBPs can affect the levels of MANSC1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MANSC1 is not available on ENCORE database.

99 RBPs can affect the gene expression of MANSC1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MANSC1	ENSG00000111261.9	1200.21190	367.07840	1.70900	32.63880	30.74910	HepG2	DDX3X
MANSC1	ENSG00000111261.9	1264.62190	383.21240	1.72240	29.19130	27.68710	HepG2	AKAP1
MANSC1	ENSG00000111261.9	747.14110	319.43390	1.22580	26.93840	25.40530	HepG2	TRIM56
MANSC1	ENSG00000111261.9	116.49210	365.05750	-1.64790	23.43940	22.26940	HepG2	SSB
MANSC1	ENSG00000111261.9	1115.32670	468.86770	1.25010	15.89590	14.30900	HepG2	FIP1L1
MANSC1	ENSG00000111261.9	1326.72680	221.07000	2.58520	15.50950	13.07150	HepG2	U2AF2
MANSC1	ENSG00000111261.9	409.13220	187.10460	1.12860	15.02850	13.05570	HepG2	HDGF
MANSC1	ENSG00000111261.9	165.07500	404.41310	-1.29270	14.09470	12.77630	HepG2	RPLP0
MANSC1	ENSG00000111261.9	526.36820	252.24990	1.06110	10.70820	8.91400	HepG2	SERBP1
MANSC1	ENSG00000111261.9	370.70430	195.92210	0.91990	9.95180	8.84810	HepG2	CKAP4
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 106 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MANSC1 is not available on ENCORE database.

1 RBPs can affect the splicing of MANSC1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
RI	MANSC1	ENSG00000111261.9	chr12	-	12496025	12496348			12496025	12496107	12496209	12496348	0.18600	0.00976	0.05949	included	HepG2	U2AF2

Showing 1 to 1 of 1 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MANSC1

General Information

Functions

Localization

Domains (AlphaFold: MANSC1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MANSC1 is not avaliable on ENCORE database.

2 proteins are bound to MANSC1 RNA:

eCLIP assay for MANSC1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MANSC1 is not available on ENCORE database.

99 RBPs can affect the gene expression of MANSC1 :

The Knockdown/knockout RNA-Seq assay for MANSC1 is not available on ENCORE database.

1 RBPs can affect the splicing of MANSC1 :

The Knockdown/knockout RNA-Seq assay for MANSC1 is not avaliable on ENCORE database.