IPO7

General Information

Gene Name : IPO7
Gene ID : ENSG00000205339.9
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: IPO7)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	IPO7	ENSG00000205339.9	33.73	30.52	32.12	ENCSR000AEF
HepG2	IPO7	ENSG00000205339.9	50.71	86.47	68.59	ENCSR985KAT
K562	IPO7	ENSG00000205339.9	80.80	86.60	83.70	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for IPO7 is not avaliable on ENCORE database.

Proteins bound to RNA

IPO7 RNA is bound by 42 proteins.

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eCLIP assay for IPO7 is not avaliable on ENCORE database.

42 proteins are bound to IPO7 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	9450457	9450461	+	intron-Distal	4.30753	400.00000	HepG2	DKC1
chr11	9450414	9450417	+	intron-Distal	4.88519	400.00000	HepG2	DKC1
chr11	9450374	9450391	+	intron-Distal	5.28604	400.00000	HepG2	DKC1
chr11	9450417	9450420	+	intron-Distal	5.18225	400.00000	HepG2	DKC1
chr11	9450422	9450429	+	intron-Distal	5.09028	400.00000	HepG2	DKC1
chr11	9450313	9450352	+	intron-Distal	7.81009	400.00000	HepG2	DKC1
chr11	9450434	9450436	+	intron-Distal	5.30676	400.00000	HepG2	DKC1
chr11	9450420	9450422	+	intron-Distal	5.12645	400.00000	HepG2	DKC1
chr11	9450391	9450413	+	intron-Distal	5.13399	400.00000	HepG2	DKC1
chr11	9450429	9450434	+	intron-Distal	5.32566	400.00000	HepG2	DKC1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 226 entries

eCLIP assay for IPO7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for IPO7 is not available on ENCORE database.
117 RBPs can affect the levels of IPO7.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for IPO7 is not available on ENCORE database.

117 RBPs can affect the gene expression of IPO7 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
IPO7	ENSG00000205339.5	2059.35050	6170.28060	-1.58310	111.63210	108.76470	HepG2	UTP3
IPO7	ENSG00000205339.5	1792.62340	6330.90530	-1.82030	104.21010	102.00250	HepG2	TIAL1
IPO7	ENSG00000205339.5	2012.91150	7523.75740	-1.90220	79.30550	76.44430	HepG2	SF3B1
IPO7	ENSG00000205339.5	4468.27530	9540.80940	-1.09440	74.64190	72.91020	HepG2	SSB
IPO7	ENSG00000205339.5	1778.29470	5896.16010	-1.72930	73.01190	70.68580	HepG2	HNRNPA1
IPO7	ENSG00000205339.5	3519.42500	6156.10680	-0.80670	42.46550	40.24510	HepG2	DDX19B
IPO7	ENSG00000205339.5	9585.72470	5994.66510	0.67710	31.23470	29.77020	HepG2	SRSF9
IPO7	ENSG00000205339.5	11621.30280	6623.17440	0.81110	31.15800	29.54210	HepG2	TAF15
IPO7	ENSG00000205339.5	3177.47350	7965.05910	-1.32580	30.39690	28.55130	HepG2	GPKOW
IPO7	ENSG00000205339.5	4613.06630	6766.10560	-0.55260	27.32270	25.64670	HepG2	SMN1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 141 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for IPO7 is not available on ENCORE database.

10 RBPs can affect the splicing of IPO7 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	IPO7	ENSG00000205339.5	chr11	+	9438605	9438695			9435801	9435958	9441957	9442052	-0.08100	0.00000	0.00000	excluded	K562	SRSF1
SE	IPO7	ENSG00000205339.5	chr11	+	9455116	9455183			9452388	9452550	9455267	9455393	-0.09300	0.00000	0.00000	excluded	K562	AQR
SE	IPO7	ENSG00000205339.5	chr11	+	9438459	9438695			9435782	9435958	9441957	9442052	-0.07300	0.00000	0.00004	excluded	K562	PUS1
SE	IPO7	ENSG00000205339.5	chr11	+	9438605	9438695			9435801	9435958	9441957	9442052	-0.05400	0.00000	0.00016	excluded	K562	U2AF1
MXE	IPO7	ENSG00000205339.5	chr11	+	9441944	9442052	9442131	9442245	9438605	9438695	9444552	9444687	0.06000	0.00000	0.00000	1included	K562	AQR
SE	IPO7	ENSG00000205339.5	chr11	+	9424836	9424918			9406168	9406394	9430032	9430186	-0.08500	0.00003	0.00167	excluded	HepG2	SF3A3
MXE	IPO7	ENSG00000205339.5	chr11	+	9451220	9451381	9456480	9456578	9450577	9450743	9457817	9457913	0.14200	0.00003	0.00217	1included	K562	UCHL5
SE	IPO7	ENSG00000205339.5	chr11	+	9438459	9438695			9435801	9435958	9441957	9442052	-0.05500	0.00006	0.00454	excluded	K562	SF3B1
SE	IPO7	ENSG00000205339.5	chr11	+	9424836	9424918			9406168	9406394	9430032	9430186	-0.07400	0.00011	0.00330	excluded	K562	SF3B4
SE	IPO7	ENSG00000205339.5	chr11	+	9450086	9450176			9446692	9446809	9450577	9450743	-0.05600	0.00066	0.01413	excluded	K562	U2AF2

Showing 1 to 10 of 14 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

IPO7

General Information

Functions

Localization

Domains (AlphaFold: IPO7)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for IPO7 is not avaliable on ENCORE database.

42 proteins are bound to IPO7 RNA:

eCLIP assay for IPO7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for IPO7 is not available on ENCORE database.

117 RBPs can affect the gene expression of IPO7 :

The Knockdown/knockout RNA-Seq assay for IPO7 is not available on ENCORE database.

10 RBPs can affect the splicing of IPO7 :

The Knockdown/knockout RNA-Seq assay for IPO7 is not avaliable on ENCORE database.