HNRNPH3

General Information

Gene Name : HNRNPH3
Gene ID : ENSG00000096746.17
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: HNRNPH3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	HNRNPH3	ENSG00000096746.17	261.24	198.88	230.06	ENCSR000AEF
HepG2	HNRNPH3	ENSG00000096746.17	202.79	244.86	223.82	ENCSR985KAT
K562	HNRNPH3	ENSG00000096746.17	338.26	378.31	358.28	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for HNRNPH3 is not avaliable on ENCORE database.

Proteins bound to RNA

HNRNPH3 RNA is bound by 53 proteins.

CanvasJS.com

eCLIP assay for HNRNPH3 is not avaliable on ENCORE database.

53 proteins are bound to HNRNPH3 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	70101065	70101109	+	CDS,intron-Proximal	5.82780	67.34613	K562	AQR
chr10	70101285	70101352	+	CDS,intron-Proximal	4.99322	54.59112	K562	AQR
chr10	70102138	70102164	+	3'-UTR	7.40445	51.62042	K562	LIN28B
chr10	70102164	70102186	+	3'-UTR	7.39723	48.64573	K562	LIN28B
chr10	70102230	70102280	+	3'-UTR	4.53321	45.92453	K562	PUM2
chr10	70091826	70091913	+	5'-UTR,intron-Distal	3.82000	37.27274	K562	DDX3X
chr10	70099195	70099312	+	CDS,intron-Proximal	3.37726	36.65598	K562	UCHL5
chr10	70101739	70101778	+	CDS	3.86059	30.74839	K562	UCHL5
chr10	70097274	70097296	+	intron-Distal	5.09739	30.70880	K562	KHSRP
chr10	70092046	70092128	+	intron-Distal,intron-Proximal	4.83154	30.57287	K562	GTF2F1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 188 entries

eCLIP assay for HNRNPH3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for HNRNPH3 is not available on ENCORE database.
113 RBPs can affect the levels of HNRNPH3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for HNRNPH3 is not available on ENCORE database.

113 RBPs can affect the gene expression of HNRNPH3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
HNRNPH3	ENSG00000096746.13	16889.24890	6449.24050	1.38880	44.62180	42.37370	K562	PUS1
HNRNPH3	ENSG00000096746.13	1849.85560	3144.65150	-0.76550	32.66040	30.94670	HepG2	CKAP4
HNRNPH3	ENSG00000096746.13	1893.30880	4318.75940	-1.18970	32.00200	30.34910	HepG2	BOP1
HNRNPH3	ENSG00000096746.13	1923.11620	4494.43400	-1.22470	24.61930	22.92060	HepG2	GPKOW
HNRNPH3	ENSG00000096746.13	2238.99750	4323.88200	-0.94950	23.50520	21.99750	HepG2	PUF60
HNRNPH3	ENSG00000096746.13	10145.56190	5702.90280	0.83100	20.99270	17.38470	K562	HNRNPH1
HNRNPH3	ENSG00000096746.13	3569.05350	5865.25970	-0.71670	17.52210	15.44930	K562	U2AF2
HNRNPH3	ENSG00000096746.13	3700.02390	5194.69760	-0.48950	16.19690	15.24850	HepG2	SRFBP1
HNRNPH3	ENSG00000096746.13	9509.34020	6283.90450	0.59760	16.18760	14.73930	K562	RBM15
HNRNPH3	ENSG00000096746.13	2207.31600	3203.49880	-0.53740	15.55640	14.30420	HepG2	PUS1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 132 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for HNRNPH3 is not available on ENCORE database.

56 RBPs can affect the splicing of HNRNPH3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	HNRNPH3	ENSG00000096746.13	chr10	+	70097614	70097753	70096955	70097090	70098259	70098399	-0.09300	0.00000	excluded	K562	SRSF1
SE	HNRNPH3	ENSG00000096746.13	chr10	+	70097614	70097753	70096955	70097090	70098259	70098399	-0.07100	0.00009	excluded	K562	SF3B4
SE	HNRNPH3	ENSG00000096746.13	chr10	+	70097614	70097753	70096955	70097090	70098259	70098399	-0.22000	0.00000	excluded	HepG2	U2AF1
SE	HNRNPH3	ENSG00000096746.13	chr10	+	70092773	70092859	70091878	70091973	70096955	70097090	0.05600	0.00032	included	K562	FMR1
SE	HNRNPH3	ENSG00000096746.13	chr10	+	70097614	70097753	70096955	70097090	70098259	70098399	-0.11100	0.00289	excluded	HepG2	DKC1
SE	HNRNPH3	ENSG00000096746.13	chr10	+	70097614	70097753	70096955	70097090	70098259	70098399	-0.14700	0.00002	excluded	HepG2	HNRNPK
SE	HNRNPH3	ENSG00000096746.13	chr10	+	70097614	70097753	70096955	70097090	70098259	70098399	-0.30600	0.00000	excluded	HepG2	U2AF2
SE	HNRNPH3	ENSG00000096746.13	chr10	+	70092758	70092859	70091878	70091973	70096955	70097090	0.07700	0.00000	included	K562	AQR
SE	HNRNPH3	ENSG00000096746.13	chr10	+	70097614	70097753	70096909	70097090	70098259	70098426	-0.48300	0.00000	excluded	K562	AQR
SE	HNRNPH3	ENSG00000096746.13	chr10	+	70098896	70099017	70098259	70098444	70099196	70099312	-0.05200	0.00000	excluded	K562	AQR

Showing 1 to 10 of 172 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

HNRNPH3

General Information

Functions

Localization

Domains (AlphaFold: HNRNPH3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for HNRNPH3 is not avaliable on ENCORE database.

53 proteins are bound to HNRNPH3 RNA:

eCLIP assay for HNRNPH3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for HNRNPH3 is not available on ENCORE database.

113 RBPs can affect the gene expression of HNRNPH3 :

The Knockdown/knockout RNA-Seq assay for HNRNPH3 is not available on ENCORE database.

56 RBPs can affect the splicing of HNRNPH3 :

The Knockdown/knockout RNA-Seq assay for HNRNPH3 is not avaliable on ENCORE database.