GTF2I

General Information

Gene Name : GTF2I
Gene ID : ENSG00000263001.5
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: GTF2I)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GTF2I	ENSG00000263001.5	89.45	77.80	83.62	ENCSR000AEF
HepG2	GTF2I	ENSG00000263001.5	74.13	125.85	99.99	ENCSR985KAT
K562	GTF2I	ENSG00000263001.5	80.86	92.60	86.73	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GTF2I is not avaliable on ENCORE database.

Proteins bound to RNA

GTF2I RNA is bound by 32 proteins.

CanvasJS.com

eCLIP assay for GTF2I is not avaliable on ENCORE database.

32 proteins are bound to GTF2I RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	74132507	74132606	+	intron-Distal	5.32254	39.22187	HepG2	QKI
chr7	74132606	74132673	+	intron-Distal	4.66796	32.54359	HepG2	QKI
chr7	74113288	74113333	+	CDS,intron-Proximal	5.11553	30.48275	HepG2	BCLAF1
chr7	74114575	74114706	+	CDS,intron-Proximal	3.10292	28.90935	HepG2	BCLAF1
chr7	74113333	74113388	+	CDS	4.43427	25.92874	HepG2	BCLAF1
chr7	74132512	74132643	+	intron-Distal	6.90193	23.43250	K562	QKI
chr7	74131211	74131272	+	CDS,intron-Proximal	3.62732	20.48804	HepG2	BCLAF1
chr7	74119515	74119551	+	CDS,intron-Proximal	4.00129	19.86646	HepG2	BCLAF1
chr7	74114575	74114684	+	CDS,intron-Proximal	3.20391	19.22629	K562	ZNF622
chr7	74131212	74131254	+	CDS,intron-Proximal	3.87961	17.68850	K562	DDX24
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 136 entries

eCLIP assay for GTF2I is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for GTF2I is not available on ENCORE database.
101 RBPs can affect the levels of GTF2I.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for GTF2I is not available on ENCORE database.

101 RBPs can affect the gene expression of GTF2I :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GTF2I	ENSG00000077809.8	14114.56450	8429.19930	0.74360	42.40510	41.03810	HepG2	SRSF1
GTF2I	ENSG00000077809.8	5357.19950	12373.83060	-1.20770	42.98490	40.99720	HepG2	PUF60
GTF2I	ENSG00000077809.8	4482.74520	6911.68140	-0.62470	27.96420	26.22810	HepG2	SAFB2
GTF2I	ENSG00000077809.8	6269.15000	8826.37100	-0.49360	22.84020	21.64630	HepG2	ZNF622
GTF2I	ENSG00000077809.8	10093.08540	15277.60270	-0.59810	22.41680	20.98390	HepG2	ETF1
GTF2I	ENSG00000077809.8	8279.84140	12217.18990	-0.56120	20.89040	19.38550	HepG2	SRSF5
GTF2I	ENSG00000077809.8	9641.27740	13072.47090	-0.43920	18.54850	16.93970	HepG2	DAZAP1
GTF2I	ENSG00000077809.8	5439.70280	7748.18110	-0.51030	17.81630	16.49490	HepG2	UTP3
GTF2I	ENSG00000077809.8	9735.23760	7557.75790	0.36520	16.59170	14.97330	K562	NSUN2
GTF2I	ENSG00000077809.8	10210.22440	13135.22950	-0.36340	14.35340	13.22430	HepG2	PUM1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 116 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for GTF2I is not available on ENCORE database.

23 RBPs can affect the splicing of GTF2I :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	GTF2I	ENSG00000077809.8	chr7	+	74133197	74133260	74131213	74131270	74143123	74143234	-0.39700	0.00000	0.00000	excluded	HepG2	U2AF2
SE	GTF2I	ENSG00000077809.8	chr7	+	74158477	74158589	74157787	74157859	74159096	74159280	-0.67700	0.00000	0.00002	excluded	HepG2	U2AF2
SE	GTF2I	ENSG00000077809.8	chr7	+	74129176	74129236	74125362	74125440	74131213	74131270	0.07700	0.00000	0.00025	included	HepG2	NCBP2
SE	GTF2I	ENSG00000077809.8	chr7	+	74129176	74129236	74125362	74125440	74131213	74131270	0.08800	0.00000	0.00014	included	HepG2	SRSF1
SE	GTF2I	ENSG00000077809.8	chr7	+	74133197	74133260	74131213	74131270	74143123	74143234	-0.24500	0.00000	0.00000	excluded	K562	U2AF2
SE	GTF2I	ENSG00000077809.8	chr7	+	74129176	74129236	74125362	74125440	74131213	74131270	0.11400	0.00000	0.00000	included	HepG2	HNRNPC
A3SS	GTF2I	ENSG00000077809.8	chr7	+	74133179	74133260	74133197	74133260	74131213	74131270	0.14400	0.00000	0.00002	longer	K562	AQR
A5SS	GTF2I	ENSG00000077809.8	chr7	+	74173109	74173313	74173109	74173185	74173877	74175022	0.12700	0.00000	0.00000	longer	HepG2	HNRNPA1
SE	GTF2I	ENSG00000077809.8	chr7	+	74133197	74133260	74131213	74131270	74143123	74143234	-0.21200	0.00001	0.00047	excluded	K562	SF3B4
SE	GTF2I	ENSG00000077809.8	chr7	+	74158477	74158589	74157787	74157859	74159096	74159280	0.38500	0.00001	0.00230	included	HepG2	TAF15

Showing 1 to 10 of 31 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GTF2I

General Information

Functions

Localization

Domains (AlphaFold: GTF2I)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GTF2I is not avaliable on ENCORE database.

32 proteins are bound to GTF2I RNA:

eCLIP assay for GTF2I is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GTF2I is not available on ENCORE database.

101 RBPs can affect the gene expression of GTF2I :

The Knockdown/knockout RNA-Seq assay for GTF2I is not available on ENCORE database.

23 RBPs can affect the splicing of GTF2I :

The Knockdown/knockout RNA-Seq assay for GTF2I is not avaliable on ENCORE database.