DNAJB2

General Information

Gene Name : DNAJB2
Gene ID : ENSG00000135924.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: DNAJB2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	DNAJB2	ENSG00000135924.15	7.01	11.37	9.19	ENCSR000AEF
HepG2	DNAJB2	ENSG00000135924.15	29.69	19.98	24.84	ENCSR985KAT
K562	DNAJB2	ENSG00000135924.15	1.33	1.50	1.42	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for DNAJB2 is not avaliable on ENCORE database.

Proteins bound to RNA

DNAJB2 RNA is bound by 10 proteins.

CanvasJS.com

eCLIP assay for DNAJB2 is not avaliable on ENCORE database.

10 proteins are bound to DNAJB2 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	220151201	220151329	+	3'-UTR	5.91653	26.59129	K562	UPF1
chr2	220151084	220151269	+	3'-UTR	6.65722	22.33527	HepG2	UPF1
chr2	220150962	220151067	+	3'-UTR	6.26776	18.93283	K562	UPF1
chr2	220150855	220150961	+	3'-UTR	5.19810	18.01611	HepG2	AKAP1
chr2	220150856	220150942	+	3'-UTR	5.28388	16.53238	K562	UPF1
chr2	220150850	220150958	+	3'-UTR	6.01024	15.72143	HepG2	UPF1
chr2	220151491	220151592	+	3'-UTR	6.04823	15.56941	K562	UPF1
chr2	220151142	220151201	+	3'-UTR	6.34213	14.85952	K562	UPF1
chr2	220151081	220151142	+	3'-UTR	5.98805	14.45346	K562	UPF1
chr2	220151329	220151435	+	3'-UTR	4.68490	14.35538	K562	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 43 entries

eCLIP assay for DNAJB2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for DNAJB2 is not available on ENCORE database.
150 RBPs can affect the levels of DNAJB2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for DNAJB2 is not available on ENCORE database.

150 RBPs can affect the gene expression of DNAJB2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DNAJB2	ENSG00000135924.11	2817.45160	1118.95130	1.33210	71.74540	70.08550	HepG2	SRFBP1
DNAJB2	ENSG00000135924.11	959.24970	184.02480	2.38190	62.67830	60.01380	K562	HNRNPC
DNAJB2	ENSG00000135924.11	701.49640	187.04240	1.90700	52.14330	49.59860	K562	NSUN2
DNAJB2	ENSG00000135924.11	1896.45750	574.01420	1.72400	49.38990	47.48150	HepG2	BOP1
DNAJB2	ENSG00000135924.11	1638.37260	575.65700	1.50890	47.76360	46.16030	HepG2	TIAL1
DNAJB2	ENSG00000135924.11	706.36290	198.32490	1.83240	45.84090	43.37270	K562	UPF1
DNAJB2	ENSG00000135924.11	1039.87810	197.36170	2.39740	43.00950	39.94130	K562	GRSF1
DNAJB2	ENSG00000135924.11	2241.59220	990.69780	1.17790	40.48210	38.95390	HepG2	RBM22
DNAJB2	ENSG00000135924.11	2176.86470	629.53510	1.78980	37.44590	35.51710	HepG2	SUPV3L1
DNAJB2	ENSG00000135924.11	567.67050	168.33910	1.75360	35.64880	33.34710	K562	MTPAP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 202 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for DNAJB2 is not available on ENCORE database.

12 RBPs can affect the splicing of DNAJB2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
RI	DNAJB2	ENSG00000135924.11	chr2	+	220145299	220146493			220145299	220145409	220146439	220146493	0.15100	0.00000	0.00002	included	HepG2	TAF15
RI	DNAJB2	ENSG00000135924.11	chr2	+	220145299	220146493			220145299	220145409	220146439	220146493	0.11900	0.00001	0.00024	included	HepG2	QKI
RI	DNAJB2	ENSG00000135924.11	chr2	+	220145299	220146493			220145299	220145409	220146439	220146493	0.11400	0.00007	0.00341	included	HepG2	PTBP1
A3SS	DNAJB2	ENSG00000135924.11	chr2	+	220147854	220147957			220147882	220147957	220147558	220147651	-0.07900	0.00018	0.06120	shorter	HepG2	FTO
RI	DNAJB2	ENSG00000135924.11	chr2	+	220145299	220146493			220145299	220145409	220146439	220146493	0.09300	0.00042	0.01243	included	HepG2	SRSF1
MXE	DNAJB2	ENSG00000135924.11	chr2	+	220147558	220147651	220147854	220147957	220146660	220146783	220148140	220148211	0.34000	0.00053	0.01728	1included	K562	FXR2
RI	DNAJB2	ENSG00000135924.11	chr2	+	220145299	220146493			220145299	220145409	220146439	220146493	0.09800	0.00069	0.02608	included	HepG2	MATR3
MXE	DNAJB2	ENSG00000135924.11	chr2	+	220147558	220147651	220147854	220147957	220146660	220146783	220148140	220148211	0.18100	0.00128	0.02474	1included	K562	HNRNPC
RI	DNAJB2	ENSG00000135924.11	chr2	+	220145299	220146493			220145299	220145409	220146439	220146493	0.07200	0.00199	0.01661	included	HepG2	SF3B4
RI	DNAJB2	ENSG00000135924.11	chr2	+	220145299	220146493			220145299	220145409	220146439	220146493	-0.09300	0.00214	0.07503	excluded	HepG2	HNRNPC

Showing 1 to 10 of 14 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

DNAJB2

General Information

Functions

Localization

Domains (AlphaFold: DNAJB2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for DNAJB2 is not avaliable on ENCORE database.

10 proteins are bound to DNAJB2 RNA:

eCLIP assay for DNAJB2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for DNAJB2 is not available on ENCORE database.

150 RBPs can affect the gene expression of DNAJB2 :

The Knockdown/knockout RNA-Seq assay for DNAJB2 is not available on ENCORE database.

12 RBPs can affect the splicing of DNAJB2 :

The Knockdown/knockout RNA-Seq assay for DNAJB2 is not avaliable on ENCORE database.