BAG6

General Information

Gene Name : BAG6
Gene ID : ENSG00000204463.12
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: BAG6)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	BAG6	ENSG00000204463.12	51.32	81.14	66.23	ENCSR000AEF
HepG2	BAG6	ENSG00000204463.12	208.52	169.39	188.95	ENCSR985KAT
K562	BAG6	ENSG00000204463.12	256.37	204.43	230.40	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for BAG6 is not avaliable on ENCORE database.

Proteins bound to RNA

BAG6 RNA is bound by 43 proteins.

CanvasJS.com

eCLIP assay for BAG6 is not avaliable on ENCORE database.

43 proteins are bound to BAG6 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	31620010	31620079	-	5'-UTR,intron-Distal,intron-Proximal	5.64851	400.00000	K562	EIF4G2
chr6	31620079	31620150	-	5'-UTR,intron-Distal,intron-Proximal	5.81642	67.91707	K562	EIF4G2
chr6	31610541	31610634	-	CDS,intron-Distal,intron-Proximal	6.14957	55.55902	HepG2	PRPF8
chr6	31608089	31608096	-	intron-Distal,intron-Proximal	6.63690	47.68410	K562	U2AF2
chr6	31608082	31608089	-	CDS,intron-Distal,intron-Proximal	6.07042	46.97073	K562	U2AF2
chr6	31610537	31610567	-	intron-Distal,intron-Proximal	7.65127	45.00538	K562	AQR
chr6	31610567	31610605	-	intron-Distal,intron-Proximal	7.63850	44.98717	K562	AQR
chr6	31612765	31612900	-	CDS,intron-Distal,intron-Proximal	3.44338	35.42928	K562	METAP2
chr6	31609141	31609180	-	CDS,intron-Distal	4.87215	31.67840	K562	DDX24
chr6	31620049	31620109	-	5'-UTR,intron-Distal,intron-Proximal	4.56177	30.79011	K562	DDX24
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 246 entries

eCLIP assay for BAG6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for BAG6 is not available on ENCORE database.
85 RBPs can affect the levels of BAG6.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for BAG6 is not available on ENCORE database.

85 RBPs can affect the gene expression of BAG6 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
BAG6	ENSG00000204463.8	6001.90810	10575.95330	-0.81730	46.94930	45.52030	HepG2	SRSF1
BAG6	ENSG00000204463.8	6459.31810	10830.95090	-0.74570	34.01600	32.57560	HepG2	NELFE
BAG6	ENSG00000204463.8	8155.85060	4948.06830	0.72090	33.49170	31.60830	HepG2	SAFB2
BAG6	ENSG00000204463.8	5367.90730	9506.73670	-0.82460	30.60890	29.01430	HepG2	TAF15
BAG6	ENSG00000204463.8	6398.25760	9426.03740	-0.55900	21.34350	20.21240	HepG2	SSB
BAG6	ENSG00000204463.8	6567.35840	9495.97620	-0.53200	19.76970	18.38640	HepG2	UTP3
BAG6	ENSG00000204463.8	5114.21030	7481.34630	-0.54880	16.73370	14.82860	HepG2	HNRNPA2B1
BAG6	ENSG00000204463.8	7173.67120	10088.04680	-0.49190	15.85160	14.57580	HepG2	RECQL
BAG6	ENSG00000204463.8	20033.68710	11929.94330	0.74770	13.04440	11.91190	K562	PUS1
BAG6	ENSG00000204463.8	6011.69150	7892.90010	-0.39280	13.09200	11.80960	HepG2	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 96 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for BAG6 is not available on ENCORE database.

58 RBPs can affect the splicing of BAG6 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	BAG6	ENSG00000204463.8	chr6	-	31608161	31608305	31607975	31608083	31608421	31608481	-0.15700	0.00000	excluded	K562	SRSF1
SE	BAG6	ENSG00000204463.8	chr6	-	31608161	31608305	31607975	31608083	31608421	31608481	-0.09300	0.00017	excluded	K562	SF3B4
SE	BAG6	ENSG00000204463.8	chr6	-	31612301	31612379	31611858	31611971	31612722	31612975	-0.07900	0.00014	excluded	K562	PRPF8
SE	BAG6	ENSG00000204463.8	chr6	-	31608421	31608481	31607975	31608083	31608568	31608715	-0.17000	0.00000	excluded	K562	PRPF8
SE	BAG6	ENSG00000204463.8	chr6	-	31612083	31612191	31611858	31611971	31612301	31612379	-0.34800	0.00000	excluded	HepG2	U2AF1
SE	BAG6	ENSG00000204463.8	chr6	-	31607276	31607423	31606804	31607003	31607975	31608083	-0.21900	0.00000	excluded	K562	XRCC6
SE	BAG6	ENSG00000204463.8	chr6	-	31612083	31612191	31611858	31611971	31612301	31612379	0.27000	0.00001	included	K562	PCBP1
SE	BAG6	ENSG00000204463.8	chr6	-	31612083	31612191	31611858	31611971	31612301	31612379	0.27900	0.00000	included	HepG2	HNRNPK
SE	BAG6	ENSG00000204463.8	chr6	-	31607276	31607423	31606804	31607003	31607975	31608083	0.36000	0.00000	included	HepG2	HNRNPK
SE	BAG6	ENSG00000204463.8	chr6	-	31607276	31607423	31606804	31607003	31607975	31608083	-0.14200	0.00073	excluded	HepG2	TBRG4

Showing 1 to 10 of 126 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

BAG6

General Information

Functions

Localization

Domains (AlphaFold: BAG6)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for BAG6 is not avaliable on ENCORE database.

43 proteins are bound to BAG6 RNA:

eCLIP assay for BAG6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for BAG6 is not available on ENCORE database.

85 RBPs can affect the gene expression of BAG6 :

The Knockdown/knockout RNA-Seq assay for BAG6 is not available on ENCORE database.

58 RBPs can affect the splicing of BAG6 :

The Knockdown/knockout RNA-Seq assay for BAG6 is not avaliable on ENCORE database.