ZMAT3

General Information

Gene Name       : ZMAT3
Gene ID             : ENSG00000172667.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZMAT3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZMAT3ENSG00000172667.1025.1821.6523.41ENCSR000AEF
HepG2ZMAT3ENSG00000172667.106.079.777.92ENCSR985KAT
K562ZMAT3ENSG00000172667.102.602.592.59ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
ZMAT3Ribo-STAMP-293TshRNAZMAT3-BGRSLV03-53,ZMAT3-BGRSLV03-54NT-BGRSLV03-1,NT-BGRSLV03-2,SubmittedENCORE2
ZMAT3Ribo-STAMP-293TshRNABGRSDLV02-61,BGRSDLV02-62BGRSDLV02-1,BGRSDLV02-2SubmittedENCORE2
ZMAT3Ribo-STAMP-293TshRNAZMAT3-BGRSDLV02-63dox,ZMAT3-BGRSDLV02-64doxZMAT3-BGRSDLV02-61,ZMAT3-BGRSDLV02-62,SubmittedENCORE2
ZMAT3293TshRNAZMAT3-BG293LV05-53,ZMAT3-BG293LV05-54NT-BG293LV05-1,NT-BG293LV05-2,SubmittingENCORE2
ZMAT3293TshRNABG293LV05-55,BG293LV05-56BG293LV05-1,BG293LV05-2NotSatisfiedENCORE2
ZMAT3293TshRNAZMAT3-BG293LV06-79B,ZMAT3-BG293LV06-80BNT-BG293LV06-1B,NT-BG293LV06-2B,SequencedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZMAT3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZMAT3 RNA is bound by 7 proteins.  







eCLIP assay for ZMAT3 is not avaliable on ENCORE database.





7 proteins are bound to ZMAT3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3178742695178742802-3'-UTR,intron-Distal3.780453.20552HepG2KHSRP
chr3178741971178742041-3'-UTR,intron-Distal3.582584.40891K562FAM120A
chr3178742579178742653-3'-UTR,intron-Distal3.946886.90497HepG2FAM120A
chr3178742489178742643-3'-UTR,intron-Distal6.3097714.82037K562FAM120A
chr3178789343178789416-5'-UTR,intron-Distal,intron-Proximal3.517356.46344HepG2PRPF8
chr3178789385178789490-5'-UTR,intron-Distal,intron-Proximal3.605273.68253HepG2DDX3X
chr3178789490178789557-5'-UTR,intron-Distal5.147236.75419HepG2DDX3X
chr3178742960178743027-CDS,intron-Distal4.201346.44495HepG2U2AF2
chr3178764724178764821-intron-Distal3.091593.46325HepG2SUGP2
chr3178757482178757564-intron-Distal3.809023.16028HepG2SUGP2
chr3178754242178754300-intron-Distal3.846023.54208HepG2SUGP2
chr3178764588178764656-intron-Distal3.873543.29248HepG2SUGP2
chr3178779995178780059-intron-Distal3.513123.10961HepG2MATR3
chr3178755358178755426-intron-Distal4.016543.79098HepG2SUGP2
chr3178787434178787534-intron-Distal3.902825.67291HepG2U2AF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZMAT3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZMAT3 is not available on ENCORE database.

  • 126 RBPs can affect the levels of ZMAT3.  








The Knockdown/knockout RNA-Seq assay for ZMAT3 is not available on ENCORE database.





126 RBPs can affect the gene expression of ZMAT3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZMAT3ENSG00000172667.61547.96810943.653300.713908.135906.40970HepG2AATF
ZMAT3ENSG00000172667.62488.959901187.509201.0675010.795309.13520HepG2ABCF1
ZMAT3ENSG00000172667.61367.319901051.232100.379202.199901.30910HepG2ADAR
ZMAT3ENSG00000172667.61875.232801403.083100.418403.184802.07020HepG2AKAP8
ZMAT3ENSG00000172667.62174.998501128.264600.946806.134205.03410HepG2AKAP8L
ZMAT3ENSG00000172667.61013.152001832.71770-0.855104.258802.15590HepG2APOBEC3C
ZMAT3ENSG00000172667.61616.554301071.656200.593007.312205.14740HepG2ATP5C1
ZMAT3ENSG00000172667.61317.922001715.01730-0.380005.619904.70130HepG2AUH
ZMAT3ENSG00000172667.6724.673701027.06570-0.503102.436201.59400HepG2BCLAF1
ZMAT3ENSG00000172667.62882.733101280.083701.1711022.4885021.04300HepG2BOP1
ZMAT3ENSG00000172667.61653.745401037.643700.6723010.942609.56930HepG2CALR
ZMAT3ENSG00000172667.61574.551601154.761100.447203.788702.89380HepG2CIRBP
ZMAT3ENSG00000172667.61826.775701122.811300.702106.557405.61330HepG2CKAP4
ZMAT3ENSG00000172667.6310.553101175.22960-1.9200017.6571016.09570HepG2CPSF6
ZMAT3ENSG00000172667.61067.19700730.206500.547405.881704.40570HepG2CSTF2
ZMAT3ENSG00000172667.61445.70310965.932800.581704.145102.36110HepG2CSTF2T
ZMAT3ENSG00000172667.61843.687401041.742800.8235013.5265012.16710HepG2DDX21
ZMAT3ENSG00000172667.61287.279801018.922300.337202.809201.88710HepG2DDX24
ZMAT3ENSG00000172667.61680.517401087.360400.628003.085601.73020HepG2DDX27
ZMAT3ENSG00000172667.6828.470501161.93770-0.488002.212201.51380HepG2DDX55
ZMAT3ENSG00000172667.62300.948601334.545300.785805.272003.93520HepG2DDX59
ZMAT3ENSG00000172667.6634.316501020.98330-0.686708.190106.59790HepG2DHX30
ZMAT3ENSG00000172667.61470.494801074.189000.453002.638001.97500HepG2DKC1
ZMAT3ENSG00000172667.6809.674501058.59200-0.386704.177603.32860HepG2DNAJC21
ZMAT3ENSG00000172667.6858.241701049.12480-0.289703.348602.64360HepG2DNAJC2
ZMAT3ENSG00000172667.61212.34320962.279300.333202.127401.31920HepG2EEF2
ZMAT3ENSG00000172667.6491.312401162.03600-1.2419019.1854017.72430HepG2EIF2S1
ZMAT3ENSG00000172667.61188.88320781.125100.605905.329104.10450HepG2EIF3D
ZMAT3ENSG00000172667.61583.99690983.422200.6876010.798908.95270HepG2EIF3G
ZMAT3ENSG00000172667.61481.167101028.702800.525805.361703.88920HepG2ESF1
ZMAT3ENSG00000172667.6561.458801177.15450-1.068105.533204.10260HepG2FTO
ZMAT3ENSG00000172667.6825.50910556.684200.568305.381204.29490HepG2FUBP3
ZMAT3ENSG00000172667.61939.748801395.585500.474902.912101.76760HepG2FUS
ZMAT3ENSG00000172667.61636.528901295.672800.336802.311101.67640HepG2FXR1
ZMAT3ENSG00000172667.61813.963601275.995700.507404.857203.66510HepG2G3BP2
ZMAT3ENSG00000172667.61289.13530695.481800.8902011.8192010.04930HepG2GEMIN5
ZMAT3ENSG00000172667.6408.165601332.33210-1.7067015.3628013.97140HepG2GPKOW
ZMAT3ENSG00000172667.62467.583301816.699800.441702.588201.51490HepG2GRSF1
ZMAT3ENSG00000172667.62118.215701337.201200.663504.021102.32770HepG2HLTF
ZMAT3ENSG00000172667.61179.555901659.62330-0.492603.133701.67830HepG2HNRNPA0
ZMAT3ENSG00000172667.6597.298701068.73230-0.8394011.4619010.28830HepG2HNRNPA1
ZMAT3ENSG00000172667.61615.129601286.078700.328603.638002.59050HepG2HNRNPA2B1
ZMAT3ENSG00000172667.61604.806401217.041300.398903.379702.61040HepG2HNRNPK
ZMAT3ENSG00000172667.61089.749301274.95250-0.226402.000601.41570HepG2HNRNPL
ZMAT3ENSG00000172667.61095.213601528.05310-0.480503.230501.89730HepG2HSPD1
ZMAT3ENSG00000172667.62358.488201221.750900.9488015.1867013.75410HepG2IGF2BP2
ZMAT3ENSG00000172667.62731.562901146.540801.252302.474701.55140HepG2IGF2BP3
ZMAT3ENSG00000172667.6723.772701206.22760-0.7369015.0579013.50590HepG2ILF2
ZMAT3ENSG00000172667.62617.114001695.398100.626305.474204.29240HepG2LARP4
ZMAT3ENSG00000172667.61700.901201149.543000.565106.198404.41010HepG2LIN28B
ZMAT3ENSG00000172667.62639.002401303.383501.017609.708108.58480HepG2MATR3
ZMAT3ENSG00000172667.61203.85630817.495800.558303.040001.93700HepG2METAP2
ZMAT3ENSG00000172667.61079.94750814.928900.406103.489702.12350HepG2NAA15
ZMAT3ENSG00000172667.61734.256701334.089000.378402.680902.05650HepG2NCBP2
ZMAT3ENSG00000172667.6991.120401447.91070-0.546803.634801.99380HepG2NKRF
ZMAT3ENSG00000172667.61105.913901387.76050-0.327502.897602.11750HepG2NOL12
ZMAT3ENSG00000172667.61571.166901168.910000.426606.457805.24590HepG2PARN
ZMAT3ENSG00000172667.62882.829401321.157301.1256013.0788011.08030HepG2PCBP2
ZMAT3ENSG00000172667.6605.674501053.24970-0.7982014.3782012.77310HepG2PPIL4
ZMAT3ENSG00000172667.61134.04420905.388900.324803.412202.56210HepG2PRPF4
ZMAT3ENSG00000172667.62436.117701388.893500.810506.897205.05700HepG2PRPF6
ZMAT3ENSG00000172667.62033.61220896.706901.1812022.5253020.55780HepG2PRPF8
ZMAT3ENSG00000172667.61700.136301102.000100.6254013.0129012.00090HepG2PTBP1
ZMAT3ENSG00000172667.61712.364601324.662100.370303.163002.53170HepG2PUF60
ZMAT3ENSG00000172667.61897.403701406.097400.432208.470907.55210HepG2PUM1
ZMAT3ENSG00000172667.6528.794301405.12620-1.4099030.4102028.35800HepG2PUM2
ZMAT3ENSG00000172667.6682.042401193.55610-0.8073014.1263012.87190HepG2QKI
ZMAT3ENSG00000172667.61490.341101083.205100.460204.950904.07250HepG2RBM25
ZMAT3ENSG00000172667.6895.286501319.66080-0.559703.869002.68180HepG2RBM27
ZMAT3ENSG00000172667.62083.221501226.444800.7642019.6788018.49130HepG2NELFE
ZMAT3ENSG00000172667.63353.265501832.549900.8716013.2833011.98890HepG2RPLP0
ZMAT3ENSG00000172667.61872.856301252.308800.580503.758702.65850HepG2RPS10
ZMAT3ENSG00000172667.62274.14170760.102701.5810051.1574049.13850HepG2RPS19
ZMAT3ENSG00000172667.62575.050601217.163401.0810022.6214020.53580HepG2RPS2
ZMAT3ENSG00000172667.62531.531001386.947700.868007.749805.29970HepG2RTF1
ZMAT3ENSG00000172667.65057.630701288.632601.9725042.6177039.93690HepG2SF3A3
ZMAT3ENSG00000172667.62225.343101147.377100.9556031.5599029.95350HepG2SF3B4
ZMAT3ENSG00000172667.61020.716301269.95990-0.315204.138203.30440HepG2SLBP
ZMAT3ENSG00000172667.61517.576201226.431000.307203.821103.08530HepG2SMN1
ZMAT3ENSG00000172667.61578.891601858.84060-0.235502.660702.16570HepG2SRFBP1
ZMAT3ENSG00000172667.62916.748101197.591801.2841064.5308062.93380HepG2SRSF1
ZMAT3ENSG00000172667.62044.242301307.803100.6443010.891909.76140HepG2SRSF5
ZMAT3ENSG00000172667.62712.169201613.922600.7488024.9937023.79590HepG2SSB
ZMAT3ENSG00000172667.6556.15400800.94630-0.526202.818401.57210HepG2STAU1
ZMAT3ENSG00000172667.61067.036201487.42470-0.479207.230506.30560HepG2SUCLG1
ZMAT3ENSG00000172667.61818.677201156.797200.652707.275606.26250HepG2SUPV3L1
ZMAT3ENSG00000172667.62188.554201076.382401.0237031.0532029.44250HepG2TAF15
ZMAT3ENSG00000172667.61677.53220989.112200.7620013.6808011.85900HepG2TIA1
ZMAT3ENSG00000172667.63258.935401147.585801.5057058.9391057.19680HepG2TIAL1
ZMAT3ENSG00000172667.6717.066101157.68470-0.691108.517707.61400HepG2TRIM56
ZMAT3ENSG00000172667.61692.683701293.992000.387403.647402.62900HepG2TUFM
ZMAT3ENSG00000172667.61763.320401025.771200.781507.998406.93230HepG2U2AF1
ZMAT3ENSG00000172667.61825.782601142.816500.6758016.3034014.88460HepG2UPF1
ZMAT3ENSG00000172667.6912.963001174.68250-0.363604.166502.91340HepG2UTP18
ZMAT3ENSG00000172667.61259.290601765.22920-0.487203.046501.89000HepG2XPO5
ZMAT3ENSG00000172667.6853.290501253.65140-0.555003.398101.98050HepG2XRCC5
ZMAT3ENSG00000172667.62440.309301402.117000.799407.365105.70200HepG2XRCC6
ZMAT3ENSG00000172667.6826.586801138.73670-0.462202.564301.86520HepG2XRN2
ZMAT3ENSG00000172667.62450.83750893.505701.4556085.2535082.65170HepG2ZC3H8
ZMAT3ENSG00000172667.61499.579701256.884500.254603.289902.70870HepG2ZNF622
ZMAT3ENSG00000172667.6321.25800194.551200.723504.558502.99980K562AARS
ZMAT3ENSG00000172667.6307.61920499.89930-0.700504.352802.79500K562ABCF1
ZMAT3ENSG00000172667.6333.39820451.00430-0.435903.071302.47790K562AGGF1
ZMAT3ENSG00000172667.6888.11090521.386300.768307.782706.88130K562AQR
ZMAT3ENSG00000172667.6384.40950226.143700.765302.198101.42700K562BOP1
ZMAT3ENSG00000172667.6167.89430240.45530-0.518202.355301.62580K562CPSF6
ZMAT3ENSG00000172667.6453.97760719.95630-0.665306.715405.21240K562CELF1
ZMAT3ENSG00000172667.6270.14870193.323600.482602.613501.33060K562DDX27
ZMAT3ENSG00000172667.6573.40210461.518400.313102.139701.55530K562DDX47
ZMAT3ENSG00000172667.6513.97190319.801500.684407.118006.04300K562EIF2S2
ZMAT3ENSG00000172667.6369.22080242.292300.607603.390702.23740K562EIF3D
ZMAT3ENSG00000172667.6426.94640585.57210-0.455803.370802.33690K562EIF4G2
ZMAT3ENSG00000172667.6148.86190234.52860-0.655803.552902.09450K562EXOSC5
ZMAT3ENSG00000172667.6217.14940359.29350-0.726503.927002.90620K562FIP1L1
ZMAT3ENSG00000172667.6309.16320184.763600.742604.342502.87920K562FKBP4
ZMAT3ENSG00000172667.6476.66620304.896500.644605.947505.10990K562FXR1
ZMAT3ENSG00000172667.6219.83710308.16140-0.487302.821501.66980K562GLRX3
ZMAT3ENSG00000172667.6154.07310229.57540-0.575402.527201.76550K562GPKOW
ZMAT3ENSG00000172667.6242.46160426.21940-0.813805.823504.72230K562GRSF1
ZMAT3ENSG00000172667.681.88710304.07460-1.8927022.2861019.72500K562HNRNPA1
ZMAT3ENSG00000172667.6530.83470335.405300.662302.470101.33620K562HNRNPA2B1
ZMAT3ENSG00000172667.6169.55540336.75020-0.989909.410407.77760K562HNRNPU
ZMAT3ENSG00000172667.6165.86130269.54050-0.700503.843001.63860K562IGF2BP1
ZMAT3ENSG00000172667.6275.86520404.85820-0.553502.816301.78030K562IGF2BP2
ZMAT3ENSG00000172667.6222.54130400.76860-0.848703.528601.88760K562ILF2
ZMAT3ENSG00000172667.6124.26630196.02940-0.657602.179301.36160K562KRR1
ZMAT3ENSG00000172667.6309.52620424.81960-0.456802.888401.94380K562MATR3
ZMAT3ENSG00000172667.6154.23800323.98720-1.0708010.235908.78330K562MTPAP
ZMAT3ENSG00000172667.6607.97690391.073500.636503.750602.68280K562NAA15
ZMAT3ENSG00000172667.6438.22290292.747100.581904.358802.80190K562NCBP2
ZMAT3ENSG00000172667.6216.70730360.00310-0.732306.516805.43550K562NSUN2
ZMAT3ENSG00000172667.6718.15030378.760500.9229011.209409.15690K562PCBP2
ZMAT3ENSG00000172667.6206.14640407.82890-0.984307.487905.99630K562PPIG
ZMAT3ENSG00000172667.6417.30790220.151200.922507.309906.09310K562PRPF8
ZMAT3ENSG00000172667.6110.11370190.92820-0.794003.455302.43080K562PSIP1
ZMAT3ENSG00000172667.6723.16780413.540500.8062010.467109.23400K562PTBP1
ZMAT3ENSG00000172667.6658.93550465.450700.501403.222802.64450K562PUS1
ZMAT3ENSG00000172667.6165.08620336.34170-1.026708.049105.10950K562RECQL
ZMAT3ENSG00000172667.6389.76080224.294500.797105.333604.19560K562RPS19
ZMAT3ENSG00000172667.6478.65270268.338200.834802.763701.56130K562SF1
ZMAT3ENSG00000172667.695.54490162.87370-0.769503.231001.85450K562SLBP
ZMAT3ENSG00000172667.691.50240165.09520-0.851403.327102.17790K562SRFBP1
ZMAT3ENSG00000172667.6256.20690363.90190-0.506203.578802.53060K562SRPK2
ZMAT3ENSG00000172667.6263.93000431.23480-0.708304.459702.80270K562STAU1
ZMAT3ENSG00000172667.6281.89570557.45830-0.9837011.421008.73390K562SUCLG1
ZMAT3ENSG00000172667.6332.08320229.511100.532903.196802.31350K562SYNCRIP
ZMAT3ENSG00000172667.6270.58790388.29150-0.521002.929001.79830K562TRA2A
ZMAT3ENSG00000172667.6445.15320331.523900.425102.789501.98240K562U2AF2
ZMAT3ENSG00000172667.6193.84410381.71700-0.9776010.736409.43830K562UPF1
ZMAT3ENSG00000172667.6219.96900326.62630-0.570303.487002.50600K562WDR3
ZMAT3ENSG00000172667.6397.00470587.41790-0.565204.040902.96430K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZMAT3 is not available on ENCORE database.





1 RBPs can affect the splicing of ZMAT3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZMAT3ENSG00000172667.6chr3-1787891141787892351787852701787855971787893821787900030.487000.001740.02253includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZMAT3 is not avaliable on ENCORE database.