TRIP13

General Information

Gene Name       : TRIP13
Gene ID             : ENSG00000071539.13
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: TRIP13)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TRIP13ENSG00000071539.1320.5021.5321.02ENCSR000AEF
HepG2TRIP13ENSG00000071539.1326.4134.3130.36ENCSR985KAT
K562TRIP13ENSG00000071539.1345.2049.0847.14ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TRIP13 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TRIP13 RNA is bound by 11 proteins.  







eCLIP assay for TRIP13 is not avaliable on ENCORE database.





11 proteins are bound to TRIP13 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5917950918118+3'-UTR,intron-Distal,polyA_site3.412003.82074K562KHDRBS1
chr5917763917810+3'-UTR,intron-Distal,intron-Proximal3.391805.52950K562PABPC4
chr5917470917530+3'-UTR,intron-Distal3.606636.16886K562YBX3
chr5917812917903+3'-UTR,intron-Distal,intron-Proximal3.121373.91938K562UPF1
chr5917737917799+3'-UTR,intron-Distal,intron-Proximal3.786865.01178K562PUM2
chr5892919892930+5'-UTR10.8913175.63463K562UTP3
chr5893103893145+5'-UTR,CDS3.448993.33524K562DDX3X
chr5892908892916+5'-UTR10.8913175.63463K562UTP3
chr5917162917184+CDS4.6196610.96719K562YBX3
chr5917138917162+CDS3.692899.92538K562YBX3
chr5900579900729+CDS,intron-Proximal3.271904.48980K562PRPF8
chr5916067916096+CDS,intron-Proximal4.017724.29223HepG2PRPF8
chr5893133893305+CDS,intron-Proximal3.562494.29728K562GEMIN5
chr5893145893202+CDS3.9615012.72642K562DDX3X
chr5917130917138+CDS3.051725.04681K562YBX3
chr5916076916171+CDS,intron-Proximal4.866176.08021K562PRPF8
chr5907439907530+intron-Distal4.660705.33214K562PRPF8
chr5908584908709+intron-Distal,intron-Proximal3.223464.64824K562PRPF8
chr5899929899982+intron-Distal4.497233.77801HepG2FKBP4
chr5900672900744+intron-Proximal4.681374.09264K562AQR
chr5916096916128+intron-Proximal4.402475.76569HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TRIP13 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TRIP13 is not available on ENCORE database.

  • 139 RBPs can affect the levels of TRIP13.  








The Knockdown/knockout RNA-Seq assay for TRIP13 is not available on ENCORE database.





139 RBPs can affect the gene expression of TRIP13 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TRIP13ENSG00000071539.9292.82710619.74820-1.081608.199205.42090HepG2AARS
TRIP13ENSG00000071539.9209.66800348.40100-0.732603.766603.15920HepG2AKAP1
TRIP13ENSG00000071539.9351.65940545.27260-0.632806.846105.69650HepG2AKAP8L
TRIP13ENSG00000071539.996.72090288.28150-1.5756013.1072011.50830HepG2ASCC1
TRIP13ENSG00000071539.9423.12000605.49030-0.517004.012602.34330HepG2ATP5C1
TRIP13ENSG00000071539.9374.10080766.22060-1.0343018.7459017.25660HepG2AUH
TRIP13ENSG00000071539.9254.55390549.44290-1.1100010.126508.54760HepG2BCLAF1
TRIP13ENSG00000071539.999.40390502.87290-2.3388037.8927036.13740HepG2BOP1
TRIP13ENSG00000071539.9348.04850502.79330-0.530704.036702.55830HepG2BUD13
TRIP13ENSG00000071539.9193.31460532.17390-1.4609021.5738019.80170HepG2CALR
TRIP13ENSG00000071539.9355.71670721.13340-1.019509.240307.46390HepG2CCAR1
TRIP13ENSG00000071539.9118.98740273.88440-1.202808.257506.97810HepG2CIRBP
TRIP13ENSG00000071539.9132.80490542.61360-2.0306048.1522046.18830HepG2CKAP4
TRIP13ENSG00000071539.9104.91050189.00270-0.849203.150802.33110HepG2CNOT7
TRIP13ENSG00000071539.9167.64750461.67030-1.4614016.4624014.95180HepG2CPSF6
TRIP13ENSG00000071539.9388.55610552.62740-0.508203.672702.40200HepG2CPSF7
TRIP13ENSG00000071539.9682.39090830.29600-0.283002.386401.78130HepG2CELF1
TRIP13ENSG00000071539.9652.47130892.89320-0.452606.494305.42660HepG2DAZAP1
TRIP13ENSG00000071539.9378.16200501.92520-0.408503.545602.61640HepG2DDX19B
TRIP13ENSG00000071539.9143.86300447.35680-1.6367022.0126020.34620HepG2DDX21
TRIP13ENSG00000071539.9276.70700437.59780-0.661205.155203.89930HepG2DDX24
TRIP13ENSG00000071539.9126.48520333.76100-1.3998011.8840010.67120HepG2DDX3X
TRIP13ENSG00000071539.9289.23070621.68270-1.1040010.257208.88360HepG2DDX55
TRIP13ENSG00000071539.9235.09210524.25870-1.157107.428905.86970HepG2DDX59
TRIP13ENSG00000071539.978.49250286.66250-1.8687015.4675014.16720HepG2DDX6
TRIP13ENSG00000071539.9299.83620516.06990-0.783405.453104.10460HepG2DHX30
TRIP13ENSG00000071539.9269.77620519.21140-0.9446012.0889010.88250HepG2DKC1
TRIP13ENSG00000071539.9160.65180535.06720-1.7358032.4839030.37400HepG2DNAJC21
TRIP13ENSG00000071539.9337.80340530.33370-0.650707.980706.94450HepG2DNAJC2
TRIP13ENSG00000071539.9206.62690337.45010-0.707604.340502.95030HepG2EFTUD2
TRIP13ENSG00000071539.9188.21430411.80220-1.129609.098007.18000HepG2AGO1
TRIP13ENSG00000071539.954.16060275.62040-2.3474022.1136020.54490HepG2EIF2S1
TRIP13ENSG00000071539.9204.83280328.59480-0.681903.837602.78380HepG2EIF3D
TRIP13ENSG00000071539.9298.35610422.33940-0.501403.293202.12630HepG2EIF3G
TRIP13ENSG00000071539.9199.11530304.61460-0.613402.941602.28170HepG2EIF4A3
TRIP13ENSG00000071539.9544.02420880.78950-0.6951011.076309.61980HepG2EIF4G1
TRIP13ENSG00000071539.9473.99570843.75870-0.832009.895908.40250HepG2EIF4G2
TRIP13ENSG00000071539.9345.98450581.38980-0.748806.299904.72530HepG2ESF1
TRIP13ENSG00000071539.9410.39230879.68470-1.1000022.4150020.98260HepG2ETF1
TRIP13ENSG00000071539.9392.62180530.34110-0.433802.897702.04470HepG2EWSR1
TRIP13ENSG00000071539.9471.21080677.81930-0.524503.291402.45820HepG2FIP1L1
TRIP13ENSG00000071539.9348.11740517.46820-0.571903.422202.01600HepG2FKBP4
TRIP13ENSG00000071539.9142.91640462.45000-1.694109.429807.58530HepG2FTO
TRIP13ENSG00000071539.9605.59940307.277800.978709.568108.35170HepG2FXR1
TRIP13ENSG00000071539.9136.15030523.35470-1.9426025.1485023.43100HepG2GPKOW
TRIP13ENSG00000071539.9418.63660518.13550-0.307602.199401.32090HepG2HDGF
TRIP13ENSG00000071539.9192.19280540.19320-1.4909019.7956018.32850HepG2HNRNPA1
TRIP13ENSG00000071539.9352.90830820.53600-1.2173025.5935023.34620HepG2HNRNPA2B1
TRIP13ENSG00000071539.9329.09480600.86220-0.868508.616407.44410HepG2HNRNPC
TRIP13ENSG00000071539.9393.04200731.42570-0.8960015.3971013.88200HepG2HNRNPF
TRIP13ENSG00000071539.9632.94420813.39410-0.361904.178903.36330HepG2HNRNPL
TRIP13ENSG00000071539.9112.98130499.44560-2.1442030.2608028.54410HepG2HNRNPLL
TRIP13ENSG00000071539.9331.66570596.88980-0.8477012.1736010.97540HepG2HNRNPU
TRIP13ENSG00000071539.9371.49940720.24000-0.9551014.1549012.65110HepG2IGF2BP1
TRIP13ENSG00000071539.990.38040289.78950-1.6809014.8501013.42590HepG2IGF2BP2
TRIP13ENSG00000071539.9373.18840609.70370-0.7082010.322508.99810HepG2ILF2
TRIP13ENSG00000071539.9373.06640496.10980-0.411203.454802.31470HepG2KIF1C
TRIP13ENSG00000071539.9397.60790761.40570-0.937308.462907.00520HepG2LARP4
TRIP13ENSG00000071539.9487.90920307.384800.666504.508503.67580HepG2MAGOH
TRIP13ENSG00000071539.9532.63080309.115900.784905.619104.74550HepG2MATR3
TRIP13ENSG00000071539.9246.43540548.38830-1.1540014.8200013.10700HepG2MSI2
TRIP13ENSG00000071539.9250.90280509.33610-1.021506.393604.88710HepG2MTPAP
TRIP13ENSG00000071539.9247.83430460.53020-0.893907.405105.45460HepG2NAA15
TRIP13ENSG00000071539.9527.81440885.38450-0.7463011.099809.61070HepG2NOL12
TRIP13ENSG00000071539.9346.32900570.82470-0.720903.435902.20820HepG2NONO
TRIP13ENSG00000071539.9222.59330442.84290-0.992408.379607.12670HepG2NSUN2
TRIP13ENSG00000071539.9161.65930281.81990-0.801804.526803.61580HepG2PABPC4
TRIP13ENSG00000071539.9385.59260590.82230-0.615606.706805.47740HepG2PARN
TRIP13ENSG00000071539.9162.58090506.28000-1.6388016.7849014.57000HepG2PCBP2
TRIP13ENSG00000071539.9304.94980532.37850-0.803909.487708.16640HepG2PPIL4
TRIP13ENSG00000071539.9371.31790465.37720-0.325702.105801.42310HepG2PRPF4
TRIP13ENSG00000071539.9156.85020479.62390-1.6125018.5534016.73160HepG2PRPF8
TRIP13ENSG00000071539.9420.71440306.513400.456802.736102.19090HepG2PTBP1
TRIP13ENSG00000071539.9272.97910845.14340-1.6304033.2410031.45920HepG2PUF60
TRIP13ENSG00000071539.9557.48650897.11760-0.6864013.1778012.08750HepG2PUM1
TRIP13ENSG00000071539.9526.79900896.48680-0.7670010.912209.62990HepG2PUM2
TRIP13ENSG00000071539.9400.69820552.76280-0.464104.374503.63250HepG2PUS1
TRIP13ENSG00000071539.9377.59770587.42580-0.637605.977304.77600HepG2RBM15
TRIP13ENSG00000071539.9285.47940735.26180-1.3649025.4131024.16270HepG2RBM22
TRIP13ENSG00000071539.9222.48110301.29050-0.437502.116101.52090HepG2RBM25
TRIP13ENSG00000071539.9421.40650568.50850-0.432002.711501.72790HepG2RBM27
TRIP13ENSG00000071539.9556.34770341.130300.705607.079106.28320HepG2NELFE
TRIP13ENSG00000071539.9442.67300317.697800.478503.318502.65140HepG2RECQL
TRIP13ENSG00000071539.9118.96910788.00750-2.7276066.2232064.00280HepG2RPLP0
TRIP13ENSG00000071539.9132.11370479.95960-1.8611019.2274016.99570HepG2RPS10
TRIP13ENSG00000071539.9106.01310319.73570-1.5926016.9070015.57430HepG2RPS19
TRIP13ENSG00000071539.9326.09580524.29600-0.685105.458304.35670HepG2RPS2
TRIP13ENSG00000071539.994.06030189.73370-1.012304.741403.69500HepG2RPS3A
TRIP13ENSG00000071539.9137.68550474.45180-1.7849020.1625018.40650HepG2RRP9
TRIP13ENSG00000071539.9415.24800531.55850-0.356302.721102.08060HepG2SAFB2
TRIP13ENSG00000071539.9329.09750493.46430-0.584402.780602.10510HepG2SF3A3
TRIP13ENSG00000071539.9190.52830494.36130-1.3756015.9145014.36970HepG2SF3B1
TRIP13ENSG00000071539.9528.25040810.27990-0.617209.542708.36420HepG2SLBP
TRIP13ENSG00000071539.9426.54480619.88980-0.539306.158005.25780HepG2SMN1
TRIP13ENSG00000071539.9178.96100356.98440-0.996202.918401.56540HepG2SNRNP200
TRIP13ENSG00000071539.9210.92320550.06050-1.3829011.420209.84540HepG2SNRNP70
TRIP13ENSG00000071539.9199.45140830.46550-2.0579063.0583061.48160HepG2SRFBP1
TRIP13ENSG00000071539.9808.31510333.106401.2788026.5127025.37580HepG2SRSF1
TRIP13ENSG00000071539.9285.56210531.90930-0.897406.270304.70890HepG2SRSF3
TRIP13ENSG00000071539.9512.22910834.40880-0.7040010.937509.80460HepG2SRSF5
TRIP13ENSG00000071539.9266.32560718.62070-1.4320032.6128030.74850HepG2SRSF7
TRIP13ENSG00000071539.9174.22400270.99190-0.637304.247203.59110HepG2SRSF9
TRIP13ENSG00000071539.9428.30170721.06580-0.7515011.0481010.15700HepG2SSB
TRIP13ENSG00000071539.9287.32310456.55620-0.668103.155901.86470HepG2SUB1
TRIP13ENSG00000071539.9785.00620948.99310-0.273702.778302.15580HepG2SUCLG1
TRIP13ENSG00000071539.9247.27320457.52940-0.887808.647607.05290HepG2SUPT6H
TRIP13ENSG00000071539.998.39410618.88890-2.6530044.7299042.65800HepG2SUPV3L1
TRIP13ENSG00000071539.9459.52700299.383700.618105.217904.48850HepG2TAF15
TRIP13ENSG00000071539.9124.88550486.76410-1.9626027.7857025.95320HepG2TARDBP
TRIP13ENSG00000071539.9156.15390414.82760-1.4095012.6502010.83970HepG2TFIP11
TRIP13ENSG00000071539.9118.77670580.00070-2.2878048.9839047.36350HepG2TIAL1
TRIP13ENSG00000071539.9334.49320585.17400-0.8069011.4828010.45110HepG2TRIM56
TRIP13ENSG00000071539.9614.37340825.60500-0.426303.626402.61220HepG2TUFM
TRIP13ENSG00000071539.9262.87650579.71970-1.1410013.2447011.83250HepG2U2AF1
TRIP13ENSG00000071539.9116.07790415.50100-1.839807.039005.39160HepG2U2AF2
TRIP13ENSG00000071539.9611.88170873.84760-0.514103.479302.53680HepG2UBE2L3
TRIP13ENSG00000071539.9242.15680365.60580-0.594303.391502.55540HepG2UCHL5
TRIP13ENSG00000071539.9160.54560437.62560-1.4467022.2941020.68760HepG2UPF1
TRIP13ENSG00000071539.9294.48400449.83090-0.611205.319303.90840HepG2UTP18
TRIP13ENSG00000071539.9311.06750422.51300-0.441802.955802.34010HepG2UTP3
TRIP13ENSG00000071539.9409.65470609.22780-0.572603.627902.80680HepG2XRN2
TRIP13ENSG00000071539.9366.91270459.27690-0.323902.163501.55890HepG2ZC3H8
TRIP13ENSG00000071539.9114.40940481.30690-2.0728045.0675043.55340HepG2ZNF622
TRIP13ENSG00000071539.9967.441401267.95460-0.390303.333902.02260K562AARS
TRIP13ENSG00000071539.91325.601002458.52420-0.8911016.0905014.83290K562AQR
TRIP13ENSG00000071539.91323.168701548.77090-0.227102.291001.41920K562BCLAF1
TRIP13ENSG00000071539.9686.677301069.64700-0.639406.438705.09590K562BOP1
TRIP13ENSG00000071539.9574.80310853.28330-0.570005.040803.52100K562CCAR1
TRIP13ENSG00000071539.91587.720401942.17500-0.290702.751901.58080K562CCDC124
TRIP13ENSG00000071539.91294.491501858.86950-0.522004.479402.57140K562CKAP4
TRIP13ENSG00000071539.91089.648001621.80030-0.573703.082001.95320K562CNOT7
TRIP13ENSG00000071539.9761.729701137.29550-0.578306.905305.65890K562CPSF6
TRIP13ENSG00000071539.91632.810702129.58220-0.383206.010505.10210K562DDX47
TRIP13ENSG00000071539.9679.81630955.23130-0.490703.942702.31070K562DHX30
TRIP13ENSG00000071539.9533.08420917.57570-0.783509.187106.90880K562DNAJC21
TRIP13ENSG00000071539.9784.440401300.69930-0.729608.700406.99690K562EFTUD2
TRIP13ENSG00000071539.91407.529202088.67010-0.5694011.209109.90580K562EIF2S2
TRIP13ENSG00000071539.9950.059901392.75190-0.551804.214602.90150K562EIF3D
TRIP13ENSG00000071539.9892.720401222.47650-0.453504.068703.07530K562EIF4A3
TRIP13ENSG00000071539.92766.225803222.39850-0.220202.187601.34750K562EIF4G2
TRIP13ENSG00000071539.9749.221001157.26060-0.627306.522605.18750K562FMR1
TRIP13ENSG00000071539.9579.95700980.92150-0.758208.013406.36950K562FTO
TRIP13ENSG00000071539.91780.374601271.311700.485807.490806.56020K562FXR1
TRIP13ENSG00000071539.91335.646501607.82430-0.267602.624601.51330K562GLRX3
TRIP13ENSG00000071539.9734.295001085.80030-0.564305.903404.74660K562GPKOW
TRIP13ENSG00000071539.92051.023302783.37320-0.440505.447304.38260K562GRSF1
TRIP13ENSG00000071539.9729.507301455.08730-0.996107.644604.76600K562HNRNPA0
TRIP13ENSG00000071539.91406.288301794.09690-0.351403.535402.31400K562HNRNPA1
TRIP13ENSG00000071539.9902.900601387.65120-0.620007.971807.00650K562HNRNPC
TRIP13ENSG00000071539.9931.149401422.54810-0.611406.242004.33040K562HNRNPK
TRIP13ENSG00000071539.91632.554501986.90650-0.283402.979902.05320K562HNRNPU
TRIP13ENSG00000071539.9296.08340927.23490-1.6469022.8465020.12570K562KRR1
TRIP13ENSG00000071539.9827.029101059.87790-0.357902.729301.85930K562METAP2
TRIP13ENSG00000071539.92460.007403434.80890-0.481605.473803.88440K562MSI2
TRIP13ENSG00000071539.91367.338601690.40480-0.306004.025603.06620K562MTPAP
TRIP13ENSG00000071539.91566.541701878.26330-0.261804.174103.27870K562NSUN2
TRIP13ENSG00000071539.9864.975301331.86080-0.622707.505905.86180K562PCBP2
TRIP13ENSG00000071539.9940.346501244.14350-0.403903.699402.63350K562PSIP1
TRIP13ENSG00000071539.91974.736301454.282800.441305.430404.52750K562PTBP1
TRIP13ENSG00000071539.92534.328503515.92250-0.472305.377604.24300K562PUF60
TRIP13ENSG00000071539.92911.298203664.21240-0.331804.667803.40990K562PUM2
TRIP13ENSG00000071539.9837.785101289.35650-0.622005.460704.31050K562RPS19
TRIP13ENSG00000071539.91458.592301853.25980-0.345503.105902.24200K562SF3A3
TRIP13ENSG00000071539.9667.870801032.76930-0.628905.246103.88200K562SF3B1
TRIP13ENSG00000071539.9926.654201285.65200-0.472403.772802.76930K562SF3B4
TRIP13ENSG00000071539.92174.399801425.666100.608909.724808.41300K562SRSF1
TRIP13ENSG00000071539.9754.085401225.62370-0.700706.820805.17400K562SUPV3L1
TRIP13ENSG00000071539.91588.909901282.579900.308902.868602.03300K562SYNCRIP
TRIP13ENSG00000071539.91029.404501442.90140-0.487204.555903.64330K562TARDBP
TRIP13ENSG00000071539.9851.387201196.67620-0.491103.913202.78770K562TIAL1
TRIP13ENSG00000071539.9982.905701237.69660-0.332502.974702.14230K562U2AF2
TRIP13ENSG00000071539.9986.109601297.10890-0.395502.900701.85270K562UCHL5
TRIP13ENSG00000071539.91704.774201991.55670-0.224302.740802.02540K562UPF1
TRIP13ENSG00000071539.91295.147901704.12150-0.395904.200003.11330K562WDR3
TRIP13ENSG00000071539.91467.139701772.02490-0.272403.747302.77230K562WDR43
TRIP13ENSG00000071539.92231.428802769.77690-0.311802.883901.99920K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TRIP13 is not available on ENCORE database.





3 RBPs can affect the splicing of TRIP13 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETRIP13ENSG00000071539.9chr5+900608900664896779896909901455901546-0.067000.002170.03891excludedK562SF3B4
SETRIP13ENSG00000071539.9chr5+908469908576908102908189911957912111-0.064000.000330.00479excludedK562AQR
SETRIP13ENSG00000071539.9chr5+914579914692911957912111916018916088-0.173000.000000.00017excludedHepG2SRSF7
SETRIP13ENSG00000071539.9chr5+914579914692911957912111916018916088-0.097000.000000.00001excludedK562SRSF7
A5SSTRIP13ENSG00000071539.9chr5+9145799148139145799146929160189160880.117000.000000.00000longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TRIP13 is not avaliable on ENCORE database.