TBCK

General Information

Gene Name : TBCK
Gene ID : ENSG00000145348.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TBCK)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TBCK	ENSG00000145348.16	10.26	9.26	9.76	ENCSR000AEF
HepG2	TBCK	ENSG00000145348.16	18.82	27.70	23.26	ENCSR985KAT
K562	TBCK	ENSG00000145348.16	6.60	7.63	7.12	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TBCK is not avaliable on ENCORE database.

Proteins bound to RNA

TBCK RNA is bound by 30 proteins.

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eCLIP assay for TBCK is not avaliable on ENCORE database.

30 proteins are bound to TBCK RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr4	107165805	107165917	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.37498	55.11594	HepG2	BCLAF1
chr4	107116640	107116718	-	intron-Distal	4.38077	40.47462	HepG2	HNRNPL
chr4	107116584	107116640	-	intron-Distal	5.00708	38.59631	HepG2	HNRNPL
chr4	107168296	107168365	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.93984	35.05120	HepG2	BCLAF1
chr4	107157578	107157673	-	3'-UTR,5'-UTR,CDS,intron-Distal	4.24644	33.86534	HepG2	BCLAF1
chr4	107157545	107157578	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.91372	27.05814	HepG2	BCLAF1
chr4	107216249	107216311	-	CDS,intron-Distal,intron-Proximal	4.24511	26.40838	HepG2	BCLAF1
chr4	107156467	107156525	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.20903	25.79765	HepG2	BCLAF1
chr4	107170071	107170095	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.74395	25.03380	HepG2	BCLAF1
chr4	107170095	107170124	-	3'-UTR,5'-UTR,CDS,intron-Distal	4.30156	22.99944	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 263 entries

eCLIP assay for TBCK is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TBCK is not available on ENCORE database.
107 RBPs can affect the levels of TBCK.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TBCK is not available on ENCORE database.

107 RBPs can affect the gene expression of TBCK :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TBCK	ENSG00000145348.12	524.41800	1233.28310	-1.23370	36.55240	34.74630	HepG2	UTP3
TBCK	ENSG00000145348.12	689.57390	1274.71180	-0.88640	24.62230	22.82300	HepG2	HNRNPL
TBCK	ENSG00000145348.12	622.40360	1212.63000	-0.96220	23.83450	22.34810	HepG2	PCBP1
TBCK	ENSG00000145348.12	674.57850	1405.01090	-1.05850	23.65350	21.80710	HepG2	PUM2
TBCK	ENSG00000145348.12	677.96110	1284.64890	-0.92210	21.78780	20.38920	HepG2	SF3B4
TBCK	ENSG00000145348.12	2551.29580	1242.85910	1.03750	20.68550	18.93700	HepG2	HNRNPK
TBCK	ENSG00000145348.12	635.37850	1090.88410	-0.77980	16.32670	15.18720	HepG2	SRSF9
TBCK	ENSG00000145348.12	1596.35270	959.15440	0.73480	16.76940	15.13040	HepG2	PRPF4
TBCK	ENSG00000145348.12	776.97550	1307.74710	-0.75110	16.31590	14.97360	HepG2	SRSF5
TBCK	ENSG00000145348.12	1470.87530	946.61570	0.63570	14.45590	13.11480	HepG2	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 126 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TBCK is not available on ENCORE database.

22 RBPs can affect the splicing of TBCK :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TBCK	ENSG00000145348.12	chr4	-	107115874	107115911			107114765	107114927	107133906	107133992	0.29300	0.00000	0.00000	included	HepG2	HNRNPK
SE	TBCK	ENSG00000145348.12	chr4	-	107115874	107115911			107114765	107114927	107133906	107133992	-0.41200	0.00000	0.00000	excluded	HepG2	DDX59
SE	TBCK	ENSG00000145348.12	chr4	-	107115874	107115911			107114765	107114927	107133906	107133992	-0.58500	0.00000	0.00000	excluded	HepG2	U2AF2
SE	TBCK	ENSG00000145348.12	chr4	-	107176103	107176204			107173022	107173164	107181593	107181667	0.46600	0.00000	0.00002	included	HepG2	PCBP1
SE	TBCK	ENSG00000145348.12	chr4	-	107115874	107115911			107114765	107114927	107133906	107133992	-0.41500	0.00000	0.00038	excluded	HepG2	PCBP1
SE	TBCK	ENSG00000145348.12	chr4	-	107115874	107115911			107114765	107114927	107133906	107133992	-0.30700	0.00001	0.00221	excluded	HepG2	FTO
SE	TBCK	ENSG00000145348.12	chr4	-	107115874	107115911			107114765	107114927	107133906	107133992	0.16900	0.00003	0.00209	included	HepG2	HNRNPC
SE	TBCK	ENSG00000145348.12	chr4	-	107176103	107176204			107173022	107173164	107181593	107181667	-0.22500	0.00005	0.00426	excluded	K562	HNRNPK
SE	TBCK	ENSG00000145348.12	chr4	-	107115874	107115911			107114765	107114927	107133906	107133992	0.16900	0.00008	0.00596	included	HepG2	HNRNPU
MXE	TBCK	ENSG00000145348.12	chr4	-	107152885	107152936	107153002	107153148	107151519	107151603	107154094	107154221	0.07600	0.00009	0.00589	1included	HepG2	HNRNPL

Showing 1 to 10 of 29 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TBCK

General Information

Functions

Localization

Domains (AlphaFold: TBCK)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TBCK is not avaliable on ENCORE database.

30 proteins are bound to TBCK RNA:

eCLIP assay for TBCK is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TBCK is not available on ENCORE database.

107 RBPs can affect the gene expression of TBCK :

The Knockdown/knockout RNA-Seq assay for TBCK is not available on ENCORE database.

22 RBPs can affect the splicing of TBCK :

The Knockdown/knockout RNA-Seq assay for TBCK is not avaliable on ENCORE database.