RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
---|
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
---|---|---|---|---|---|---|---|---|
chr18 | 19209135 | 19209183 | + | 3'-UTR | 6.04894 | 400.00000 | K562 | PUM2 |
chr18 | 19192311 | 19192404 | + | 5'-UTR,CDS | 4.77854 | 400.00000 | K562 | DDX3X |
chr18 | 19209052 | 19209077 | + | 3'-UTR,CDS | 4.41541 | 38.52736 | K562 | UCHL5 |
chr18 | 19209021 | 19209077 | + | 3'-UTR,CDS,intron-Proximal | 3.45002 | 37.17588 | K562 | ZNF622 |
chr18 | 19209077 | 19209110 | + | 3'-UTR,CDS | 4.57971 | 36.41590 | K562 | UCHL5 |
chr18 | 19209027 | 19209052 | + | 3'-UTR,CDS | 4.42907 | 34.71222 | K562 | UCHL5 |
chr18 | 19209048 | 19209080 | + | 3'-UTR,CDS | 3.29749 | 29.30817 | K562 | GRWD1 |
chr18 | 19209021 | 19209027 | + | 3'-UTR,CDS,intron-Proximal | 4.86461 | 26.69443 | K562 | UCHL5 |
chr18 | 19209021 | 19209048 | + | 3'-UTR,CDS,intron-Proximal | 3.17165 | 26.63869 | K562 | GRWD1 |
chr18 | 19209110 | 19209130 | + | 3'-UTR | 4.51306 | 26.27361 | K562 | UCHL5 |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
SNRPD1 | ENSG00000167088.6 | 2166.79730 | 3920.44870 | -0.85550 | 36.65590 | 34.39430 | K562 | UPF1 | |
SNRPD1 | ENSG00000167088.6 | 1452.72410 | 2461.59970 | -0.76080 | 29.62270 | 28.09850 | HepG2 | PUM1 | |
SNRPD1 | ENSG00000167088.6 | 2440.09800 | 3697.42600 | -0.59960 | 27.32350 | 25.37640 | K562 | NSUN2 | |
SNRPD1 | ENSG00000167088.6 | 828.94020 | 1809.69790 | -1.12640 | 26.30870 | 24.36700 | HepG2 | RBM25 | |
SNRPD1 | ENSG00000167088.6 | 867.99570 | 1851.25790 | -1.09270 | 20.09610 | 18.45780 | HepG2 | CPSF6 | |
SNRPD1 | ENSG00000167088.6 | 941.13700 | 2098.56030 | -1.15690 | 19.13730 | 17.61100 | HepG2 | GPKOW | |
SNRPD1 | ENSG00000167088.6 | 957.58810 | 1951.96570 | -1.02750 | 19.14720 | 17.55620 | HepG2 | TARDBP | |
SNRPD1 | ENSG00000167088.6 | 1900.54370 | 3354.62130 | -0.81970 | 18.33080 | 16.10120 | K562 | WDR3 | |
SNRPD1 | ENSG00000167088.6 | 989.78510 | 1528.12510 | -0.62660 | 14.27150 | 13.06240 | HepG2 | PUS1 | |
SNRPD1 | ENSG00000167088.6 | 983.25550 | 2409.67440 | -1.29320 | 12.40980 | 11.22150 | K562 | HNRNPC | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SE | SNRPD1 | ENSG00000167088.6 | chr18 | + | 19202685 | 19202770 | 19192227 | 19192404 | 19203708 | 19203900 | -0.05300 | 0.00000 | 0.00000 | excluded | K562 | SF3B4 | |||
SE | SNRPD1 | ENSG00000167088.6 | chr18 | + | 19202685 | 19202762 | 19192274 | 19192404 | 19203708 | 19203875 | -0.09000 | 0.00000 | 0.00000 | excluded | K562 | AQR | |||
A3SS | SNRPD1 | ENSG00000167088.6 | chr18 | + | 19203831 | 19203900 | 19203835 | 19203900 | 19202685 | 19202762 | 0.09600 | 0.00000 | 0.01183 | longer | K562 | ABCF1 | |||
A3SS | SNRPD1 | ENSG00000167088.6 | chr18 | + | 19203831 | 19203900 | 19203835 | 19203900 | 19202685 | 19202762 | 0.14700 | 0.00000 | 0.00004 | longer | K562 | HNRNPL | |||
A3SS | SNRPD1 | ENSG00000167088.6 | chr18 | + | 19203831 | 19203900 | 19203835 | 19203900 | 19202685 | 19202762 | 0.13500 | 0.00001 | 0.03576 | longer | K562 | WDR43 | |||
A3SS | SNRPD1 | ENSG00000167088.6 | chr18 | + | 19203831 | 19203900 | 19203835 | 19203900 | 19202685 | 19202762 | -0.09900 | 0.00004 | 0.00843 | shorter | K562 | SF3B1 | |||
A3SS | SNRPD1 | ENSG00000167088.6 | chr18 | + | 19203831 | 19203900 | 19203835 | 19203900 | 19202685 | 19202762 | 0.14000 | 0.00006 | 0.07541 | longer | K562 | DDX55 | |||
A3SS | SNRPD1 | ENSG00000167088.6 | chr18 | + | 19203831 | 19203900 | 19203835 | 19203900 | 19202685 | 19202762 | 0.07400 | 0.00010 | 0.03292 | longer | K562 | DROSHA | |||
A3SS | SNRPD1 | ENSG00000167088.6 | chr18 | + | 19203831 | 19203900 | 19203835 | 19203900 | 19202685 | 19202762 | -0.09900 | 0.00012 | 0.08975 | shorter | K562 | METAP2 |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".